RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 PCDHGB7Q9Y5F8 929 aa5.47□□□□□ -1.53
SMAD4-207ENST00000589076 SLC12A7Q9Y666 1083 aa5.47□□□□□ -1.53
SMAD4-207ENST00000589076 C1QTNF3-AMACRE9PGA6 284 aa5.46□□□□□ -1.54
SMAD4-207ENST00000589076 GUCY2CP25092 1073 aa5.46□□□□□ -1.54
SMAD4-207ENST00000589076 GDF5P43026 501 aa5.46□□□□□ -1.54
SMAD4-207ENST00000589076 DLX2Q07687 328 aaPredicted RBP5.46□□□□□ -1.54
SMAD4-207ENST00000589076 ADAMTS17Q8TE56 1095 aa5.46□□□□□ -1.54
SMAD4-207ENST00000589076 C8orf49Q96NF6 230 aa5.46□□□□□ -1.54
SMAD4-207ENST00000589076 KRTAP17-1Q9BYP8 105 aa5.46□□□□□ -1.54
SMAD4-207ENST00000589076 AP5M1Q9H0R1 490 aa5.46□□□□□ -1.54
SMAD4-207ENST00000589076 RXFP1Q9HBX9 757 aa5.46□□□□□ -1.54
SMAD4-207ENST00000589076 CAPN10Q9HC96 672 aa5.46□□□□□ -1.54
SMAD4-207ENST00000589076 PLA2G2DQ9UNK4 145 aa5.46□□□□□ -1.54
SMAD4-207ENST00000589076 MATN3O15232 486 aa5.45□□□□□ -1.54
SMAD4-207ENST00000589076 NPHS1O60500 1241 aa5.45□□□□□ -1.54
SMAD4-207ENST00000589076 PPM1BO75688 479 aa5.45□□□□□ -1.54
SMAD4-207ENST00000589076 ZNF20P17024 532 aa5.45□□□□□ -1.54
SMAD4-207ENST00000589076 PAMP19021 973 aa5.45□□□□□ -1.54
SMAD4-207ENST00000589076 SMAD4Q13485 552 aaKnown RBP5.45□□□□□ -1.54
SMAD4-207ENST00000589076 SURF1Q15526 300 aa5.45□□□□□ -1.54
SMAD4-207ENST00000589076 RGL3Q3MIN7 710 aa5.45□□□□□ -1.54
SMAD4-207ENST00000589076 HEATR6Q6AI08 1181 aaKnown RBP5.45□□□□□ -1.54
SMAD4-207ENST00000589076 UNC5AQ6ZN44 842 aa5.45□□□□□ -1.54
SMAD4-207ENST00000589076 USP51Q70EK9 711 aa5.45□□□□□ -1.54
SMAD4-207ENST00000589076 ADAT2Q7Z6V5 191 aaKnown RBP5.45□□□□□ -1.54
SMAD4-207ENST00000589076 ZC3H18Q86VM9 953 aaKnown RBP5.45□□□□□ -1.54
SMAD4-207ENST00000589076 PPFIBP1Q86W92 1011 aa5.45□□□□□ -1.54
SMAD4-207ENST00000589076 VPS37DQ86XT2 251 aa5.45□□□□□ -1.54
SMAD4-207ENST00000589076 DVL3Q92997 716 aaPredicted RBP5.45□□□□□ -1.54
SMAD4-207ENST00000589076 KISS1RQ969F8 398 aaPredicted RBP5.45□□□□□ -1.54
SMAD4-207ENST00000589076 CRBNQ96SW2 442 aa5.45□□□□□ -1.54
SMAD4-207ENST00000589076 C1QTNF3Q9BXJ4 246 aa5.45□□□□□ -1.54
SMAD4-207ENST00000589076 BCAS3Q9H6U6 928 aa5.45□□□□□ -1.54
SMAD4-207ENST00000589076 INPP5FQ9Y2H2 1132 aa5.45□□□□□ -1.54
SMAD4-207ENST00000589076 NPHP3-ACAD11A0A0J9YXS1 232 aa5.44□□□□□ -1.54
SMAD4-207ENST00000589076 AURKAO14965 403 aa5.44□□□□□ -1.54
SMAD4-207ENST00000589076 AMPD2Q01433 879 aa5.44□□□□□ -1.54
SMAD4-207ENST00000589076 FAM26FQ5R3K3 315 aa5.44□□□□□ -1.54
SMAD4-207ENST00000589076 WWC2Q6AWC2 1192 aa5.44□□□□□ -1.54
SMAD4-207ENST00000589076 DCP2Q8IU60 420 aaKnown RBP5.44□□□□□ -1.54
SMAD4-207ENST00000589076 TTLL6Q8N841 843 aa5.44□□□□□ -1.54
SMAD4-207ENST00000589076 SLC16A11Q8NCK7 471 aa5.44□□□□□ -1.54
SMAD4-207ENST00000589076 SPATA32Q96LK8 384 aa5.44□□□□□ -1.54
SMAD4-207ENST00000589076 NOX5Q96PH1 765 aa5.44□□□□□ -1.54
SMAD4-207ENST00000589076 RBM15Q96T37 977 aaKnown RBP eCLIP5.44□□□□□ -1.54
SMAD4-207ENST00000589076 TINF2Q9BSI4 451 aa5.44□□□□□ -1.54
SMAD4-207ENST00000589076 SPATA6Q9NWH7 488 aaPredicted RBP5.44□□□□□ -1.54
SMAD4-207ENST00000589076 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.44□□□□□ -1.54
SMAD4-207ENST00000589076 ZNF214Q9UL59 606 aaPredicted RBP5.44□□□□□ -1.54
SMAD4-207ENST00000589076 BACE2Q9Y5Z0 518 aa5.44□□□□□ -1.54
SMAD4-207ENST00000589076 C2orf71A6NGG8 1288 aa5.43□□□□□ -1.54
SMAD4-207ENST00000589076 MROH6A6NGR9 719 aa5.43□□□□□ -1.54
SMAD4-207ENST00000589076 STXBP3O00186 592 aa5.43□□□□□ -1.54
SMAD4-207ENST00000589076 RPL13P26373 211 aaKnown RBP5.43□□□□□ -1.54
SMAD4-207ENST00000589076 GJA8P48165 433 aa5.43□□□□□ -1.54
SMAD4-207ENST00000589076 PAK2Q13177 524 aa5.43□□□□□ -1.54
SMAD4-207ENST00000589076 SF3A1Q15459 793 aaKnown RBP5.43□□□□□ -1.54
SMAD4-207ENST00000589076 GNPTABQ3T906 1256 aa5.43□□□□□ -1.54
SMAD4-207ENST00000589076 TBC1D10BQ4KMP7 808 aaPredicted RBP5.43□□□□□ -1.54
SMAD4-207ENST00000589076 KRTAP5-3Q6L8H2 238 aa5.43□□□□□ -1.54
SMAD4-207ENST00000589076 ETV3LQ6ZN32 361 aa5.43□□□□□ -1.54
SMAD4-207ENST00000589076 PLEKHH3Q7Z736 793 aa5.43□□□□□ -1.54
SMAD4-207ENST00000589076 LINC00482Q8N8I6 264 aa5.43□□□□□ -1.54
SMAD4-207ENST00000589076 KYQ8NBH2 561 aa5.43□□□□□ -1.54
SMAD4-207ENST00000589076 RBBP8NLQ8NC74 664 aaPredicted RBP5.43□□□□□ -1.54
SMAD4-207ENST00000589076 ADCY4Q8NFM4 1077 aa5.43□□□□□ -1.54
SMAD4-207ENST00000589076 SREK1Q8WXA9 508 aaKnown RBP5.43□□□□□ -1.54
SMAD4-207ENST00000589076 DRC1Q96MC2 740 aa5.43□□□□□ -1.54
SMAD4-207ENST00000589076 CDK5RAP1Q96SZ6 601 aaKnown RBP5.43□□□□□ -1.54
SMAD4-207ENST00000589076 GMLQ99445 158 aa5.43□□□□□ -1.54
SMAD4-207ENST00000589076 NGRNQ9NPE2 291 aaKnown RBP5.43□□□□□ -1.54
SMAD4-207ENST00000589076 GULP1Q9UBP9 304 aa5.43□□□□□ -1.54
SMAD4-207ENST00000589076 HMGA2P52926 109 aa5.42□□□□□ -1.54
SMAD4-207ENST00000589076 RASGRP4Q8TDF6 673 aa5.42□□□□□ -1.54
SMAD4-207ENST00000589076 SORCS2Q96PQ0 1159 aa5.42□□□□□ -1.54
SMAD4-207ENST00000589076 HAUS7Q99871 368 aa5.42□□□□□ -1.54
SMAD4-207ENST00000589076 PHAXQ9H814 394 aaKnown RBP5.42□□□□□ -1.54
SMAD4-207ENST00000589076 INVSQ9Y283 1065 aa5.42□□□□□ -1.54
SMAD4-207ENST00000589076 SUGT1Q9Y2Z0 365 aa5.42□□□□□ -1.54
SMAD4-207ENST00000589076 FUCA1P04066 466 aa5.41□□□□□ -1.54
SMAD4-207ENST00000589076 NTRK1P04629 796 aa5.41□□□□□ -1.54
SMAD4-207ENST00000589076 C6P13671 934 aa5.41□□□□□ -1.54
SMAD4-207ENST00000589076 THBS2P35442 1172 aa5.41□□□□□ -1.54
SMAD4-207ENST00000589076 ARID5AQ03989 594 aa5.41□□□□□ -1.54
SMAD4-207ENST00000589076 ZYXQ15942 572 aaKnown RBP5.41□□□□□ -1.54
SMAD4-207ENST00000589076 DPY19L1Q2PZI1 675 aa5.41□□□□□ -1.54
SMAD4-207ENST00000589076 CD300LDQ6UXZ3 194 aa5.41□□□□□ -1.54
SMAD4-207ENST00000589076 CPNE8Q86YQ8 564 aa5.41□□□□□ -1.54
SMAD4-207ENST00000589076 GPRASP2Q96D09 838 aa5.41□□□□□ -1.54
SMAD4-207ENST00000589076 LCORQ96JN0 433 aaPredicted RBP5.41□□□□□ -1.54
SMAD4-207ENST00000589076 C11orf84Q9BUA3 381 aaPredicted RBP5.41□□□□□ -1.54
SMAD4-207ENST00000589076 USP35Q9P2H5 1018 aa5.41□□□□□ -1.54
SMAD4-207ENST00000589076 VAMP4O75379 141 aa5.4□□□□□ -1.54
SMAD4-207ENST00000589076 ATF4P18848 351 aaPredicted RBP5.4□□□□□ -1.54
SMAD4-207ENST00000589076 SLC7A5Q01650 507 aa5.4□□□□□ -1.54
SMAD4-207ENST00000589076 GRB10Q13322 594 aa5.4□□□□□ -1.54
SMAD4-207ENST00000589076 COL9A2Q14055 689 aaPredicted RBP5.4□□□□□ -1.54
SMAD4-207ENST00000589076 MCTP2Q6DN12 878 aa5.4□□□□□ -1.54
SMAD4-207ENST00000589076 CRACR2BQ8N4Y2 399 aaPredicted RBP5.4□□□□□ -1.54
SMAD4-207ENST00000589076 SEC16BQ96JE7 1060 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms