RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 AMNQ9BXJ7 453 aa13.42□□□□□ -0.26
RFX1-204ENST00000588885 LY9Q9HBG7 655 aa13.42□□□□□ -0.26
RFX1-204ENST00000588885 TSHZ2Q9NRE2 1034 aa13.42□□□□□ -0.26
RFX1-204ENST00000588885 PCDHA1Q9Y5I3 950 aa13.42□□□□□ -0.26
RFX1-204ENST00000588885 DCDC2CA8MYV0 355 aa13.41□□□□□ -0.26
RFX1-204ENST00000588885 ZBTB5O15062 677 aa13.41□□□□□ -0.26
RFX1-204ENST00000588885 PSMC6P62333 389 aa13.41□□□□□ -0.26
RFX1-204ENST00000588885 FAAP100Q0VG06 881 aa13.41□□□□□ -0.26
RFX1-204ENST00000588885 TROAPQ12815 778 aa13.41□□□□□ -0.26
RFX1-204ENST00000588885 NECTIN1Q15223 517 aa13.41□□□□□ -0.26
RFX1-204ENST00000588885 SLC17A8Q8NDX2 589 aa13.41□□□□□ -0.26
RFX1-204ENST00000588885 DNERQ8NFT8 737 aa13.41□□□□□ -0.26
RFX1-204ENST00000588885 COPS5Q92905 334 aa13.41□□□□□ -0.26
RFX1-204ENST00000588885 RMDN3Q96TC7 470 aa13.41□□□□□ -0.26
RFX1-204ENST00000588885 MPHOSPH6Q99547 160 aaKnown RBP13.41□□□□□ -0.26
RFX1-204ENST00000588885 A0A0U1RQG5 324 aaPredicted RBP13.4□□□□□ -0.26
RFX1-204ENST00000588885 ARVCFO00192 962 aa13.4□□□□□ -0.26
RFX1-204ENST00000588885 CYTH3O43739 400 aa13.4□□□□□ -0.26
RFX1-204ENST00000588885 ZEB2O60315 1214 aa13.4□□□□□ -0.26
RFX1-204ENST00000588885 EIF2AK2P19525 551 aaKnown RBP13.4□□□□□ -0.26
RFX1-204ENST00000588885 RXRAP19793 462 aa13.4□□□□□ -0.26
RFX1-204ENST00000588885 EDNRBP24530 442 aa13.4□□□□□ -0.26
RFX1-204ENST00000588885 HOXA13P31271 388 aaPredicted RBP13.4□□□□□ -0.26
RFX1-204ENST00000588885 MCM5P33992 734 aa13.4□□□□□ -0.26
RFX1-204ENST00000588885 DUSP28Q4G0W2 176 aa13.4□□□□□ -0.26
RFX1-204ENST00000588885 ARHGEF16Q5VV41 709 aa13.4□□□□□ -0.26
RFX1-204ENST00000588885 SEPT14Q6ZU15 432 aa13.4□□□□□ -0.26
RFX1-204ENST00000588885 ZNF654Q8IZM8 581 aa13.4□□□□□ -0.26
RFX1-204ENST00000588885 OR6J1Q8NGC5 347 aa13.4□□□□□ -0.26
RFX1-204ENST00000588885 NSUN6Q8TEA1 469 aaKnown RBP13.4□□□□□ -0.26
RFX1-204ENST00000588885 MTMR8Q96EF0 704 aa13.4□□□□□ -0.26
RFX1-204ENST00000588885 LAMA4Q16363 1823 aa13.4□□□□□ -0.26
RFX1-204ENST00000588885 ELP1O95163 1332 aa13.39□□□□□ -0.27
RFX1-204ENST00000588885 MYH6P13533 1939 aa13.39□□□□□ -0.27
RFX1-204ENST00000588885 RBM47A0AV96 593 aaKnown RBP13.39□□□□□ -0.27
RFX1-204ENST00000588885 CCDC69A6NI79 296 aa13.39□□□□□ -0.27
RFX1-204ENST00000588885 B4DLN1 442 aa13.39□□□□□ -0.27
RFX1-204ENST00000588885 SH2B2O14492 632 aaPredicted RBP13.39□□□□□ -0.27
RFX1-204ENST00000588885 OPLAHO14841 1288 aa13.39□□□□□ -0.27
RFX1-204ENST00000588885 MYL3P08590 195 aa13.39□□□□□ -0.27
RFX1-204ENST00000588885 TXNP10599 105 aaKnown RBP13.39□□□□□ -0.27
RFX1-204ENST00000588885 RAG1P15918 1043 aa13.39□□□□□ -0.27
RFX1-204ENST00000588885 CDK7P50613 346 aa13.39□□□□□ -0.27
RFX1-204ENST00000588885 MRPL12P52815 198 aaKnown RBP13.39□□□□□ -0.27
RFX1-204ENST00000588885 SHHQ15465 462 aa13.39□□□□□ -0.27
RFX1-204ENST00000588885 LRIT3Q3SXY7 679 aa13.39□□□□□ -0.27
RFX1-204ENST00000588885 C9orf50Q5SZB4 431 aa13.39□□□□□ -0.27
RFX1-204ENST00000588885 Q7L0L9 218 aa13.39□□□□□ -0.27
RFX1-204ENST00000588885 ANKRD33Q7Z3H0 272 aa13.39□□□□□ -0.27
RFX1-204ENST00000588885 CMTR1Q8N1G2 835 aaKnown RBP13.39□□□□□ -0.27
RFX1-204ENST00000588885 PPP1R13LQ8WUF5 828 aa13.39□□□□□ -0.27
RFX1-204ENST00000588885 TCEANC2Q96MN5 208 aa13.39□□□□□ -0.27
RFX1-204ENST00000588885 RIOX1Q9H6W3 641 aa13.39□□□□□ -0.27
RFX1-204ENST00000588885 LOC102724159A0A0B4J2E5 919 aa13.38□□□□□ -0.27
RFX1-204ENST00000588885 PNMA6FA0A0J9YX94 578 aa13.38□□□□□ -0.27
RFX1-204ENST00000588885 KIAA0355O15063 1070 aa13.38□□□□□ -0.27
RFX1-204ENST00000588885 ARIH2O95376 493 aa13.38□□□□□ -0.27
RFX1-204ENST00000588885 PLEKHA8P1O95397 391 aa13.38□□□□□ -0.27
RFX1-204ENST00000588885 MYCLP12524 364 aaPredicted RBP13.38□□□□□ -0.27
RFX1-204ENST00000588885 CHMP4BP1P59074 171 aa13.38□□□□□ -0.27
RFX1-204ENST00000588885 NKX3-2P78367 333 aa13.38□□□□□ -0.27
RFX1-204ENST00000588885 ITGA7Q13683 1181 aa13.38□□□□□ -0.27
RFX1-204ENST00000588885 PPP2R5BQ15173 497 aa13.38□□□□□ -0.27
RFX1-204ENST00000588885 PWP2Q15269 919 aaKnown RBP13.38□□□□□ -0.27
RFX1-204ENST00000588885 LY6KQ17RY6 165 aa13.38□□□□□ -0.27
RFX1-204ENST00000588885 FCHSD1Q86WN1 690 aa13.38□□□□□ -0.27
RFX1-204ENST00000588885 RASEFQ8IZ41 740 aa13.38□□□□□ -0.27
RFX1-204ENST00000588885 CCDC82Q8N4S0 544 aa13.38□□□□□ -0.27
RFX1-204ENST00000588885 CTCFLQ8NI51 663 aaPredicted RBP13.38□□□□□ -0.27
RFX1-204ENST00000588885 SCFD2Q8WU76 684 aa13.38□□□□□ -0.27
RFX1-204ENST00000588885 ZFP91Q96JP5 570 aaPredicted RBP13.38□□□□□ -0.27
RFX1-204ENST00000588885 TOX2Q96NM4 488 aa13.38□□□□□ -0.27
RFX1-204ENST00000588885 Q9Y3F1 56 aa13.38□□□□□ -0.27
RFX1-204ENST00000588885 GRIN2DO15399 1336 aa13.38□□□□□ -0.27
RFX1-204ENST00000588885 hCG_1642624A0A1W2PR95 340 aa13.37□□□□□ -0.27
RFX1-204ENST00000588885 GCOM1H8Y6P7 765 aaPredicted RBP13.37□□□□□ -0.27
RFX1-204ENST00000588885 SORBS3O60504 671 aa13.37□□□□□ -0.27
RFX1-204ENST00000588885 CABYRO75952 493 aa13.37□□□□□ -0.27
RFX1-204ENST00000588885 DDAH1O94760 285 aa13.37□□□□□ -0.27
RFX1-204ENST00000588885 NR3C2P08235 984 aa13.37□□□□□ -0.27
RFX1-204ENST00000588885 POLR2MP0CAP2 368 aa13.37□□□□□ -0.27
RFX1-204ENST00000588885 HSD17B4P51659 736 aa13.37□□□□□ -0.27
RFX1-204ENST00000588885 EPHB4P54760 987 aa13.37□□□□□ -0.27
RFX1-204ENST00000588885 TTLL4Q14679 1199 aa13.37□□□□□ -0.27
RFX1-204ENST00000588885 STXBP2Q15833 593 aa13.37□□□□□ -0.27
RFX1-204ENST00000588885 RNF20Q5VTR2 975 aa13.37□□□□□ -0.27
RFX1-204ENST00000588885 GPR153Q6NV75 609 aa13.37□□□□□ -0.27
RFX1-204ENST00000588885 TMTC2Q8N394 836 aa13.37□□□□□ -0.27
RFX1-204ENST00000588885 ZNF579Q8NAF0 562 aaKnown RBP13.37□□□□□ -0.27
RFX1-204ENST00000588885 TMEM87BQ96K49 555 aa13.37□□□□□ -0.27
RFX1-204ENST00000588885 IWS1Q96ST2 819 aa13.37□□□□□ -0.27
RFX1-204ENST00000588885 PPP1R12CQ9BZL4 782 aa13.37□□□□□ -0.27
RFX1-204ENST00000588885 TRPV6Q9H1D0 765 aa13.37□□□□□ -0.27
RFX1-204ENST00000588885 PXMP2Q9NR77 195 aa13.37□□□□□ -0.27
RFX1-204ENST00000588885 SLC12A7Q9Y666 1083 aa13.37□□□□□ -0.27
RFX1-204ENST00000588885 KIF5BP33176 963 aa13.36□□□□□ -0.27
RFX1-204ENST00000588885 CPT1AP50416 773 aa13.36□□□□□ -0.27
RFX1-204ENST00000588885 ADCK5Q3MIX3 580 aa13.36□□□□□ -0.27
RFX1-204ENST00000588885 FAM126BQ8IXS8 530 aa13.36□□□□□ -0.27
RFX1-204ENST00000588885 SRBD1Q8N5C6 995 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms