RNA–Protein interactions for RNA: ENST00000588580.6

SUGP1-208, Transcript of SURP and G-patch domain containing 1, humanhuman

TSL 2

Gene SUGP1, Length 715 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-208ENST00000588580 GPKOWQ92917 476 aaPredicted RBP eCLIP18.24■□□□□ 0.51
SUGP1-208ENST00000588580 LLPHQ9BRT6 129 aaKnown RBP18.24■□□□□ 0.51
SUGP1-208ENST00000588580 MCM3APO60318 1980 aa18.23■□□□□ 0.51
SUGP1-208ENST00000588580 STXBP3O00186 592 aa18.23■□□□□ 0.51
SUGP1-208ENST00000588580 SCG2P13521 617 aa18.23■□□□□ 0.51
SUGP1-208ENST00000588580 RGS2P41220 211 aa18.23■□□□□ 0.51
SUGP1-208ENST00000588580 GHRHRQ02643 423 aa18.23■□□□□ 0.51
SUGP1-208ENST00000588580 SSRP1Q08945 709 aaKnown RBP18.23■□□□□ 0.51
SUGP1-208ENST00000588580 TJAP1Q5JTD0 557 aa18.23■□□□□ 0.51
SUGP1-208ENST00000588580 TRERF1Q96PN7 1200 aa18.23■□□□□ 0.51
SUGP1-208ENST00000588580 ACAD9Q9H845 621 aa18.23■□□□□ 0.51
SUGP1-208ENST00000588580 HOMER2Q9NSB8 354 aa18.23■□□□□ 0.51
SUGP1-208ENST00000588580 BARHL2Q9NY43 387 aa18.23■□□□□ 0.51
SUGP1-208ENST00000588580 PCDHA1Q9Y5I3 950 aa18.23■□□□□ 0.51
SUGP1-208ENST00000588580 hCG_1984214I3L0E3 225 aa18.22■□□□□ 0.51
SUGP1-208ENST00000588580 DEXIO95424 95 aa18.22■□□□□ 0.51
SUGP1-208ENST00000588580 GRB14Q14449 540 aa18.22■□□□□ 0.51
SUGP1-208ENST00000588580 PPP1R18Q6NYC8 613 aa18.22■□□□□ 0.51
SUGP1-208ENST00000588580 HEATR3Q7Z4Q2 680 aa18.22■□□□□ 0.51
SUGP1-208ENST00000588580 PLEKHH3Q7Z736 793 aa18.22■□□□□ 0.51
SUGP1-208ENST00000588580 TRIM22Q8IYM9 498 aa18.22■□□□□ 0.51
SUGP1-208ENST00000588580 ZNF713Q8N859 430 aaPredicted RBP18.22■□□□□ 0.51
SUGP1-208ENST00000588580 USP38Q8NB14 1042 aa18.22■□□□□ 0.51
SUGP1-208ENST00000588580 BADQ92934 168 aa18.22■□□□□ 0.51
SUGP1-208ENST00000588580 A1CFQ9NQ94 594 aaKnown RBP18.22■□□□□ 0.51
SUGP1-208ENST00000588580 FLRT1Q9NZU1 646 aa18.22■□□□□ 0.51
SUGP1-208ENST00000588580 FBXO40Q9UH90 709 aa18.22■□□□□ 0.51
SUGP1-208ENST00000588580 PTPREP23469 700 aa18.21■□□□□ 0.51
SUGP1-208ENST00000588580 SLC4A3P48751 1232 aa18.21■□□□□ 0.51
SUGP1-208ENST00000588580 TRAF1Q13077 416 aa18.21■□□□□ 0.51
SUGP1-208ENST00000588580 CCAR1Q8IX12 1150 aaKnown RBP18.21■□□□□ 0.51
SUGP1-208ENST00000588580 ABRAQ8N0Z2 381 aa18.21■□□□□ 0.51
SUGP1-208ENST00000588580 AIFM3Q96NN9 605 aa18.21■□□□□ 0.51
SUGP1-208ENST00000588580 APBA2Q99767 749 aa18.21■□□□□ 0.51
SUGP1-208ENST00000588580 ORC3Q9UBD5 711 aaPredicted RBP18.21■□□□□ 0.51
SUGP1-208ENST00000588580 ATP11BQ9Y2G3 1177 aa18.21■□□□□ 0.51
SUGP1-208ENST00000588580 MRPL11Q9Y3B7 192 aaKnown RBP18.21■□□□□ 0.51
SUGP1-208ENST00000588580 DNAJC25-GNG10A0A024R161 153 aa18.2■□□□□ 0.5
SUGP1-208ENST00000588580 SLC15A5A6NIM6 579 aa18.2■□□□□ 0.5
SUGP1-208ENST00000588580 MAP2K5Q13163 448 aa18.2■□□□□ 0.5
SUGP1-208ENST00000588580 HSCBQ8IWL3 235 aa18.2■□□□□ 0.5
SUGP1-208ENST00000588580 RGS22Q8NE09 1264 aa18.2■□□□□ 0.5
SUGP1-208ENST00000588580 DDX11Q96FC9 970 aa18.2■□□□□ 0.5
SUGP1-208ENST00000588580 DDX20Q9UHI6 824 aaKnown RBP18.2■□□□□ 0.5
SUGP1-208ENST00000588580 LTBP2Q14767 1821 aa18.2■□□□□ 0.5
SUGP1-208ENST00000588580 ESYT2A0FGR8 921 aa18.19■□□□□ 0.5
SUGP1-208ENST00000588580 DNM1LO00429 736 aa18.19■□□□□ 0.5
SUGP1-208ENST00000588580 STRNO43815 780 aa18.19■□□□□ 0.5
SUGP1-208ENST00000588580 CNGA1P29973 690 aa18.19■□□□□ 0.5
SUGP1-208ENST00000588580 HSD17B4P51659 736 aa18.19■□□□□ 0.5
SUGP1-208ENST00000588580 AKAP17AQ02040 695 aaKnown RBP18.19■□□□□ 0.5
SUGP1-208ENST00000588580 WDR78Q5VTH9 848 aa18.19■□□□□ 0.5
SUGP1-208ENST00000588580 MFSD14CQ5VZR4 134 aa18.19■□□□□ 0.5
SUGP1-208ENST00000588580 SLC30A10Q6XR72 485 aa18.19■□□□□ 0.5
SUGP1-208ENST00000588580 SLC39A5Q6ZMH5 540 aa18.19■□□□□ 0.5
SUGP1-208ENST00000588580 TBC1D5Q92609 795 aa18.19■□□□□ 0.5
SUGP1-208ENST00000588580 FGD4Q96M96 766 aa18.19■□□□□ 0.5
SUGP1-208ENST00000588580 MMP19Q99542 508 aa18.19■□□□□ 0.5
SUGP1-208ENST00000588580 MAF1Q9H063 256 aa18.19■□□□□ 0.5
SUGP1-208ENST00000588580 CYP39A1Q9NYL5 469 aa18.19■□□□□ 0.5
SUGP1-208ENST00000588580 FCER1AP12319 257 aa18.18■□□□□ 0.5
SUGP1-208ENST00000588580 ADORA2AP29274 412 aa18.18■□□□□ 0.5
SUGP1-208ENST00000588580 PLA2G5P39877 138 aa18.18■□□□□ 0.5
SUGP1-208ENST00000588580 NAPAP54920 295 aa18.18■□□□□ 0.5
SUGP1-208ENST00000588580 HMGN5P82970 282 aaKnown RBP18.18■□□□□ 0.5
SUGP1-208ENST00000588580 GRIN2CQ14957 1233 aa18.18■□□□□ 0.5
SUGP1-208ENST00000588580 GJC2Q5T442 439 aaPredicted RBP18.18■□□□□ 0.5
SUGP1-208ENST00000588580 PRDM5Q9NQX1 630 aaPredicted RBP18.18■□□□□ 0.5
SUGP1-208ENST00000588580 SH3GLB2Q9NR46 395 aa18.18■□□□□ 0.5
SUGP1-208ENST00000588580 VPS54Q9P1Q0 977 aa18.18■□□□□ 0.5
SUGP1-208ENST00000588580 IVNS1ABPQ9Y6Y0 642 aa18.18■□□□□ 0.5
SUGP1-208ENST00000588580 FRMPD3Q5JV73 1810 aa18.18■□□□□ 0.5
SUGP1-208ENST00000588580 ADAMTS3O15072 1205 aa18.17■□□□□ 0.5
SUGP1-208ENST00000588580 COBLO75128 1261 aa18.17■□□□□ 0.5
SUGP1-208ENST00000588580 HOXC6P09630 235 aa18.17■□□□□ 0.5
SUGP1-208ENST00000588580 RPS6P62753 249 aaKnown RBP18.17■□□□□ 0.5
SUGP1-208ENST00000588580 KCTD2Q14681 263 aa18.17■□□□□ 0.5
SUGP1-208ENST00000588580 NPY5RQ15761 445 aa18.17■□□□□ 0.5
SUGP1-208ENST00000588580 NSMFQ6X4W1 530 aa18.17■□□□□ 0.5
SUGP1-208ENST00000588580 SH3RF1Q7Z6J0 888 aa18.17■□□□□ 0.5
SUGP1-208ENST00000588580 FAM177A1Q8N128 213 aaPredicted RBP18.17■□□□□ 0.5
SUGP1-208ENST00000588580 FAM133AQ8N9E0 248 aa18.17■□□□□ 0.5
SUGP1-208ENST00000588580 TRPV1Q8NER1 839 aa18.17■□□□□ 0.5
SUGP1-208ENST00000588580 INTS4Q96HW7 963 aaKnown RBP18.17■□□□□ 0.5
SUGP1-208ENST00000588580 ALG1Q9BT22 464 aa18.17■□□□□ 0.5
SUGP1-208ENST00000588580 TSHZ2Q9NRE2 1034 aa18.17■□□□□ 0.5
SUGP1-208ENST00000588580 GJB4Q9NTQ9 266 aa18.17■□□□□ 0.5
SUGP1-208ENST00000588580 COL20A1Q9P218 1284 aa18.17■□□□□ 0.5
SUGP1-208ENST00000588580 MYH7BA7E2Y1 1941 aa18.17■□□□□ 0.5
SUGP1-208ENST00000588580 ASTN1O14525 1302 aa18.17■□□□□ 0.5
SUGP1-208ENST00000588580 TRIM43BA6NCK2 446 aa18.16■□□□□ 0.5
SUGP1-208ENST00000588580 PIK3CDO00329 1044 aa18.16■□□□□ 0.5
SUGP1-208ENST00000588580 MEIS2O14770 477 aa18.16■□□□□ 0.5
SUGP1-208ENST00000588580 MSCO60682 206 aa18.16■□□□□ 0.5
SUGP1-208ENST00000588580 IGHA2P01877 340 aa18.16■□□□□ 0.5
SUGP1-208ENST00000588580 PGK2P07205 417 aa18.16■□□□□ 0.5
SUGP1-208ENST00000588580 BAATQ14032 418 aaPredicted RBP18.16■□□□□ 0.5
SUGP1-208ENST00000588580 ZNF792Q3KQV3 632 aa18.16■□□□□ 0.5
SUGP1-208ENST00000588580 RNF207Q6ZRF8 634 aa18.16■□□□□ 0.5
SUGP1-208ENST00000588580 MCF2L2Q86YR7 1114 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms