RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 NOL8Q76FK4 1167 aaKnown RBP23.28■■□□□ 1.32
DDX39A-207ENST00000588542 EEPD1Q7L9B9 569 aa23.28■■□□□ 1.32
DDX39A-207ENST00000588542 FBXO16Q8IX29 292 aaPredicted RBP23.28■■□□□ 1.32
DDX39A-207ENST00000588542 NSUN6Q8TEA1 469 aaKnown RBP23.28■■□□□ 1.32
DDX39A-207ENST00000588542 SLKQ9H2G2 1235 aaPredicted RBP23.28■■□□□ 1.32
DDX39A-207ENST00000588542 BARHL2Q9NY43 387 aa23.28■■□□□ 1.32
DDX39A-207ENST00000588542 FAM184BQ9ULE4 1060 aa23.28■■□□□ 1.32
DDX39A-207ENST00000588542 hCG_1984214I3L0E3 225 aa23.27■■□□□ 1.32
DDX39A-207ENST00000588542 PIK3CDO00329 1044 aa23.27■■□□□ 1.32
DDX39A-207ENST00000588542 SCG2P13521 617 aa23.27■■□□□ 1.32
DDX39A-207ENST00000588542 EIF2AK2P19525 551 aaKnown RBP23.27■■□□□ 1.32
DDX39A-207ENST00000588542 ARHGEF16Q5VV41 709 aa23.27■■□□□ 1.32
DDX39A-207ENST00000588542 PPP1R18Q6NYC8 613 aa23.27■■□□□ 1.32
DDX39A-207ENST00000588542 ZNF713Q8N859 430 aaPredicted RBP23.27■■□□□ 1.32
DDX39A-207ENST00000588542 LENG1Q96BZ8 264 aaPredicted RBP23.27■■□□□ 1.32
DDX39A-207ENST00000588542 IWS1Q96ST2 819 aa23.27■■□□□ 1.32
DDX39A-207ENST00000588542 SLC26A6Q9BXS9 759 aa23.27■■□□□ 1.32
DDX39A-207ENST00000588542 PSTPIP2Q9H939 334 aa23.27■■□□□ 1.32
DDX39A-207ENST00000588542 VTA1Q9NP79 307 aa23.27■■□□□ 1.32
DDX39A-207ENST00000588542 PDGFCQ9NRA1 345 aa23.27■■□□□ 1.32
DDX39A-207ENST00000588542 RBM27Q9P2N5 1060 aaKnown RBP23.27■■□□□ 1.32
DDX39A-207ENST00000588542 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.26■■□□□ 1.31
DDX39A-207ENST00000588542 NAPAP54920 295 aa23.26■■□□□ 1.31
DDX39A-207ENST00000588542 PDE4DQ08499 809 aa23.26■■□□□ 1.31
DDX39A-207ENST00000588542 FCHSD1Q86WN1 690 aa23.26■■□□□ 1.31
DDX39A-207ENST00000588542 ANKLE1Q8NAG6 615 aa23.26■■□□□ 1.31
DDX39A-207ENST00000588542 PDCD2LQ9BRP1 358 aa23.26■■□□□ 1.31
DDX39A-207ENST00000588542 FRMPD4Q14CM0 1322 aa23.26■■□□□ 1.31
DDX39A-207ENST00000588542 CPLX1O14810 134 aa23.25■■□□□ 1.31
DDX39A-207ENST00000588542 ADCYAP1R1P41586 468 aa23.25■■□□□ 1.31
DDX39A-207ENST00000588542 MPHOSPH6Q99547 160 aaKnown RBP23.25■■□□□ 1.31
DDX39A-207ENST00000588542 ALPK3Q96L96 1907 aa23.24■■□□□ 1.31
DDX39A-207ENST00000588542 RBM47A0AV96 593 aaKnown RBP23.24■■□□□ 1.31
DDX39A-207ENST00000588542 B4DLN1 442 aa23.24■■□□□ 1.31
DDX39A-207ENST00000588542 FARP2O94887 1054 aaPredicted RBP23.24■■□□□ 1.31
DDX39A-207ENST00000588542 NR3C2P08235 984 aa23.24■■□□□ 1.31
DDX39A-207ENST00000588542 RARBP10826 455 aa23.24■■□□□ 1.31
DDX39A-207ENST00000588542 MRPL12P52815 198 aaKnown RBP23.24■■□□□ 1.31
DDX39A-207ENST00000588542 AKAP17AQ02040 695 aaKnown RBP23.24■■□□□ 1.31
DDX39A-207ENST00000588542 SSRP1Q08945 709 aaKnown RBP23.24■■□□□ 1.31
DDX39A-207ENST00000588542 PGM5Q15124 567 aa23.24■■□□□ 1.31
DDX39A-207ENST00000588542 UBE2SQ16763 222 aa23.24■■□□□ 1.31
DDX39A-207ENST00000588542 TMEM63BQ5T3F8 832 aa23.24■■□□□ 1.31
DDX39A-207ENST00000588542 NECAB1Q8N987 351 aa23.24■■□□□ 1.31
DDX39A-207ENST00000588542 IL31RAQ8NI17 732 aa23.24■■□□□ 1.31
DDX39A-207ENST00000588542 SMARCC2Q8TAQ2 1214 aa23.24■■□□□ 1.31
DDX39A-207ENST00000588542 DIS3LQ8TF46 1054 aaKnown RBP23.24■■□□□ 1.31
DDX39A-207ENST00000588542 CUL5Q93034 780 aa23.24■■□□□ 1.31
DDX39A-207ENST00000588542 RIC8AQ9NPQ8 531 aa23.24■■□□□ 1.31
DDX39A-207ENST00000588542 DNAH12Q6ZR08 3092 aa23.24■■□□□ 1.31
DDX39A-207ENST00000588542 DUSP11O75319 330 aaKnown RBP23.23■■□□□ 1.31
DDX39A-207ENST00000588542 CTDNEP1O95476 244 aa23.23■■□□□ 1.31
DDX39A-207ENST00000588542 RABEP1Q15276 862 aa23.23■■□□□ 1.31
DDX39A-207ENST00000588542 IQSEC1Q6DN90 963 aa23.23■■□□□ 1.31
DDX39A-207ENST00000588542 CPLX2Q6PUV4 134 aaKnown RBP23.23■■□□□ 1.31
DDX39A-207ENST00000588542 GTF3C6Q969F1 213 aa23.23■■□□□ 1.31
DDX39A-207ENST00000588542 XPNPEP3Q9NQH7 507 aa23.23■■□□□ 1.31
DDX39A-207ENST00000588542 MYH7BA7E2Y1 1941 aa23.23■■□□□ 1.31
DDX39A-207ENST00000588542 SMCO2A6NFE2 343 aa23.22■■□□□ 1.31
DDX39A-207ENST00000588542 DTNBO60941 627 aa23.22■■□□□ 1.31
DDX39A-207ENST00000588542 SMPD1P17405 629 aa23.22■■□□□ 1.31
DDX39A-207ENST00000588542 PTGS1P23219 599 aa23.22■■□□□ 1.31
DDX39A-207ENST00000588542 TNFAIP2Q03169 654 aa23.22■■□□□ 1.31
DDX39A-207ENST00000588542 ST3GAL1Q11201 340 aa23.22■■□□□ 1.31
DDX39A-207ENST00000588542 STXBP2Q15833 593 aa23.22■■□□□ 1.31
DDX39A-207ENST00000588542 VSIG10LQ86VR7 867 aa23.22■■□□□ 1.31
DDX39A-207ENST00000588542 TRIM22Q8IYM9 498 aa23.22■■□□□ 1.31
DDX39A-207ENST00000588542 PAWRQ96IZ0 340 aaKnown RBP23.22■■□□□ 1.31
DDX39A-207ENST00000588542 LIMCH1Q9UPQ0 1083 aa23.22■■□□□ 1.31
DDX39A-207ENST00000588542 GNEQ9Y223 722 aaKnown RBP23.22■■□□□ 1.31
DDX39A-207ENST00000588542 SYNRGQ9UMZ2 1314 aa23.22■■□□□ 1.31
DDX39A-207ENST00000588542 ADAMTS3O15072 1205 aa23.21■■□□□ 1.31
DDX39A-207ENST00000588542 ADAMTS4O75173 837 aa23.21■■□□□ 1.31
DDX39A-207ENST00000588542 PGK1P00558 417 aa23.21■■□□□ 1.31
DDX39A-207ENST00000588542 ADCY7P51828 1080 aa23.21■■□□□ 1.31
DDX39A-207ENST00000588542 LRRC41Q15345 812 aa23.21■■□□□ 1.31
DDX39A-207ENST00000588542 GJC2Q5T442 439 aaPredicted RBP23.21■■□□□ 1.31
DDX39A-207ENST00000588542 ZMYND12Q9H0C1 365 aa23.21■■□□□ 1.31
DDX39A-207ENST00000588542 ESYT2A0FGR8 921 aa23.2■■□□□ 1.3
DDX39A-207ENST00000588542 EIF3JO75822 258 aaKnown RBP23.2■■□□□ 1.3
DDX39A-207ENST00000588542 CDKL5O76039 1030 aa23.2■■□□□ 1.3
DDX39A-207ENST00000588542 DEXIO95424 95 aa23.2■■□□□ 1.3
DDX39A-207ENST00000588542 MYCLP12524 364 aaPredicted RBP23.2■■□□□ 1.3
DDX39A-207ENST00000588542 CLK2P49760 499 aaKnown RBP23.2■■□□□ 1.3
DDX39A-207ENST00000588542 IRX5P78411 483 aaPredicted RBP23.2■■□□□ 1.3
DDX39A-207ENST00000588542 TEX2Q8IWB9 1127 aa23.2■■□□□ 1.3
DDX39A-207ENST00000588542 ARRDC4Q8NCT1 418 aa23.2■■□□□ 1.3
DDX39A-207ENST00000588542 WDR11Q9BZH6 1224 aa23.2■■□□□ 1.3
DDX39A-207ENST00000588542 UPF3AQ9H1J1 476 aaKnown RBP23.2■■□□□ 1.3
DDX39A-207ENST00000588542 VPS54Q9P1Q0 977 aa23.2■■□□□ 1.3
DDX39A-207ENST00000588542 STK36Q9NRP7 1315 aa23.19■■□□□ 1.3
DDX39A-207ENST00000588542 DNM1LO00429 736 aa23.19■■□□□ 1.3
DDX39A-207ENST00000588542 RGS20O76081 388 aa23.19■■□□□ 1.3
DDX39A-207ENST00000588542 COL6A1P12109 1028 aa23.19■■□□□ 1.3
DDX39A-207ENST00000588542 CCND2P30279 289 aa23.19■■□□□ 1.3
DDX39A-207ENST00000588542 GJA9P57773 515 aa23.19■■□□□ 1.3
DDX39A-207ENST00000588542 MRPS9P82933 396 aaKnown RBP23.19■■□□□ 1.3
DDX39A-207ENST00000588542 MLLT1Q03111 559 aaPredicted RBP23.19■■□□□ 1.3
DDX39A-207ENST00000588542 DUSP28Q4G0W2 176 aa23.19■■□□□ 1.3
DDX39A-207ENST00000588542 KLHDC9Q8NEP7 349 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms