RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 MRPL11Q9Y3B7 192 aaKnown RBP16.73■□□□□ 0.27
VMP1-206ENST00000587945 B4DLN1 442 aa16.72■□□□□ 0.27
VMP1-206ENST00000587945 KLRF2D3W0D1 207 aa16.72■□□□□ 0.27
VMP1-206ENST00000587945 NKRFO15226 690 aaKnown RBP eCLIP16.72■□□□□ 0.27
VMP1-206ENST00000587945 CYP2C9P11712 490 aa16.72■□□□□ 0.27
VMP1-206ENST00000587945 PBX2P40425 430 aa16.72■□□□□ 0.27
VMP1-206ENST00000587945 MRPL12P52815 198 aaKnown RBP16.72■□□□□ 0.27
VMP1-206ENST00000587945 TRDNQ13061 729 aa16.72■□□□□ 0.27
VMP1-206ENST00000587945 RASIP1Q5U651 963 aa16.72■□□□□ 0.27
VMP1-206ENST00000587945 SEPT14Q6ZU15 432 aa16.72■□□□□ 0.27
VMP1-206ENST00000587945 MCF2L2Q86YR7 1114 aa16.72■□□□□ 0.27
VMP1-206ENST00000587945 MTG1Q9BT17 334 aaPredicted RBP16.72■□□□□ 0.27
VMP1-206ENST00000587945 WNT8AQ9H1J5 351 aa16.72■□□□□ 0.27
VMP1-206ENST00000587945 SENP2Q9HC62 589 aa16.72■□□□□ 0.27
VMP1-206ENST00000587945 GPHNQ9NQX3 736 aaPredicted RBP16.72■□□□□ 0.27
VMP1-206ENST00000587945 MAD2L2Q9UI95 211 aa16.72■□□□□ 0.27
VMP1-206ENST00000587945 U3KPZ7 1027 aaPredicted RBP16.72■□□□□ 0.27
VMP1-206ENST00000587945 A0A0C4DFX4 3053 aa16.72■□□□□ 0.27
VMP1-206ENST00000587945 PPP1R11O60927 126 aaPredicted RBP16.71■□□□□ 0.27
VMP1-206ENST00000587945 EIF2AK2P19525 551 aaKnown RBP16.71■□□□□ 0.27
VMP1-206ENST00000587945 TTLL4Q14679 1199 aa16.71■□□□□ 0.27
VMP1-206ENST00000587945 LY6KQ17RY6 165 aa16.71■□□□□ 0.27
VMP1-206ENST00000587945 SLC35G1Q2M3R5 365 aa16.71■□□□□ 0.27
VMP1-206ENST00000587945 NBPF20Q3BBV1 942 aa16.71■□□□□ 0.27
VMP1-206ENST00000587945 FAM47CQ5HY64 1035 aa16.71■□□□□ 0.27
VMP1-206ENST00000587945 CCDC62Q6P9F0 684 aa16.71■□□□□ 0.27
VMP1-206ENST00000587945 PSRC1Q6PGN9 363 aaPredicted RBP16.71■□□□□ 0.27
VMP1-206ENST00000587945 CHST3Q7LGC8 479 aa16.71■□□□□ 0.27
VMP1-206ENST00000587945 NSUN6Q8TEA1 469 aaKnown RBP16.71■□□□□ 0.27
VMP1-206ENST00000587945 SCLYQ96I15 445 aa16.71■□□□□ 0.27
VMP1-206ENST00000587945 RMDN3Q96TC7 470 aa16.71■□□□□ 0.27
VMP1-206ENST00000587945 SEZ6LQ9BYH1 1024 aa16.71■□□□□ 0.27
VMP1-206ENST00000587945 CXXC1Q9P0U4 656 aaPredicted RBP16.71■□□□□ 0.27
VMP1-206ENST00000587945 PALM3A6NDB9 673 aaPredicted RBP16.7■□□□□ 0.26
VMP1-206ENST00000587945 A6NJR5 290 aa16.7■□□□□ 0.26
VMP1-206ENST00000587945 E7EWF7 191 aa16.7■□□□□ 0.26
VMP1-206ENST00000587945 OPLAHO14841 1288 aa16.7■□□□□ 0.26
VMP1-206ENST00000587945 IFIT3O14879 490 aaKnown RBP16.7■□□□□ 0.26
VMP1-206ENST00000587945 SGSM2O43147 1006 aa16.7■□□□□ 0.26
VMP1-206ENST00000587945 CFBP00751 764 aa16.7■□□□□ 0.26
VMP1-206ENST00000587945 CHMP4BP1P59074 171 aa16.7■□□□□ 0.26
VMP1-206ENST00000587945 GRIN2CQ14957 1233 aa16.7■□□□□ 0.26
VMP1-206ENST00000587945 BRDTQ58F21 947 aaPredicted RBP16.7■□□□□ 0.26
VMP1-206ENST00000587945 ARHGEF16Q5VV41 709 aa16.7■□□□□ 0.26
VMP1-206ENST00000587945 STOX1Q6ZVD7 989 aa16.7■□□□□ 0.26
VMP1-206ENST00000587945 OTOP2Q7RTS6 562 aa16.7■□□□□ 0.26
VMP1-206ENST00000587945 MAFAQ8NHW3 353 aaPredicted RBP16.7■□□□□ 0.26
VMP1-206ENST00000587945 AFG1LQ8WV93 481 aa16.7■□□□□ 0.26
VMP1-206ENST00000587945 HERVK_113Q902F9 699 aa16.7■□□□□ 0.26
VMP1-206ENST00000587945 TIFAQ96CG3 184 aa16.7■□□□□ 0.26
VMP1-206ENST00000587945 MTMR8Q96EF0 704 aa16.7■□□□□ 0.26
VMP1-206ENST00000587945 AMNQ9BXJ7 453 aa16.7■□□□□ 0.26
VMP1-206ENST00000587945 PBX4Q9BYU1 374 aa16.7■□□□□ 0.26
VMP1-206ENST00000587945 CDH23Q9H251 3354 aa16.69■□□□□ 0.26
VMP1-206ENST00000587945 TMEM265A0A087WTH1 108 aa16.69■□□□□ 0.26
VMP1-206ENST00000587945 FGBP02675 491 aa16.69■□□□□ 0.26
VMP1-206ENST00000587945 FOSL2P15408 326 aa16.69■□□□□ 0.26
VMP1-206ENST00000587945 STXBP2Q15833 593 aa16.69■□□□□ 0.26
VMP1-206ENST00000587945 HOMER1Q86YM7 354 aa16.69■□□□□ 0.26
VMP1-206ENST00000587945 VWCEQ96DN2 955 aa16.69■□□□□ 0.26
VMP1-206ENST00000587945 LAMA4Q16363 1823 aa16.68■□□□□ 0.26
VMP1-206ENST00000587945 ZBTB5O15062 677 aa16.68■□□□□ 0.26
VMP1-206ENST00000587945 KPNA6O60684 536 aa16.68■□□□□ 0.26
VMP1-206ENST00000587945 ARHGAP1Q07960 439 aa16.68■□□□□ 0.26
VMP1-206ENST00000587945 GRM4Q14833 912 aa16.68■□□□□ 0.26
VMP1-206ENST00000587945 RALYLQ86SE5 291 aaKnown RBP16.68■□□□□ 0.26
VMP1-206ENST00000587945 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.68■□□□□ 0.26
VMP1-206ENST00000587945 IWS1Q96ST2 819 aa16.68■□□□□ 0.26
VMP1-206ENST00000587945 MAF1Q9H063 256 aa16.68■□□□□ 0.26
VMP1-206ENST00000587945 ZNF576Q9H609 170 aa16.68■□□□□ 0.26
VMP1-206ENST00000587945 PXMP2Q9NR77 195 aa16.68■□□□□ 0.26
VMP1-206ENST00000587945 PCDHA1Q9Y5I3 950 aa16.68■□□□□ 0.26
VMP1-206ENST00000587945 ERICH2A1L162 156 aa16.67■□□□□ 0.26
VMP1-206ENST00000587945 GH1P01241 217 aa16.67■□□□□ 0.26
VMP1-206ENST00000587945 NR3C2P08235 984 aa16.67■□□□□ 0.26
VMP1-206ENST00000587945 SUPT20HL2P0C7V6 817 aa16.67■□□□□ 0.26
VMP1-206ENST00000587945 HOXA13P31271 388 aaPredicted RBP16.67■□□□□ 0.26
VMP1-206ENST00000587945 HSD17B4P51659 736 aa16.67■□□□□ 0.26
VMP1-206ENST00000587945 ANTXR2P58335 489 aa16.67■□□□□ 0.26
VMP1-206ENST00000587945 WTAPQ15007 396 aa16.67■□□□□ 0.26
VMP1-206ENST00000587945 NCOA7Q8NI08 942 aa16.67■□□□□ 0.26
VMP1-206ENST00000587945 PIGSQ96S52 555 aa16.67■□□□□ 0.26
VMP1-206ENST00000587945 DDX41Q9UJV9 622 aaKnown RBP16.67■□□□□ 0.26
VMP1-206ENST00000587945 RBM8AQ9Y5S9 174 aaKnown RBP16.67■□□□□ 0.26
VMP1-206ENST00000587945 CYTH3O43739 400 aa16.66■□□□□ 0.26
VMP1-206ENST00000587945 EIF3JO75822 258 aaKnown RBP16.66■□□□□ 0.26
VMP1-206ENST00000587945 MMP3P08254 477 aa16.66■□□□□ 0.26
VMP1-206ENST00000587945 MYCLP12524 364 aaPredicted RBP16.66■□□□□ 0.26
VMP1-206ENST00000587945 TROAPQ12815 778 aa16.66■□□□□ 0.26
VMP1-206ENST00000587945 TMEM67Q5HYA8 995 aa16.66■□□□□ 0.26
VMP1-206ENST00000587945 NFRKBQ6P4R8 1299 aa16.66■□□□□ 0.26
VMP1-206ENST00000587945 DEFB128Q7Z7B8 93 aa16.66■□□□□ 0.26
VMP1-206ENST00000587945 RPUSD2Q8IZ73 545 aaKnown RBP16.66■□□□□ 0.26
VMP1-206ENST00000587945 PIBF1Q8WXW3 757 aa16.66■□□□□ 0.26
VMP1-206ENST00000587945 MAP4K1Q92918 833 aa16.66■□□□□ 0.26
VMP1-206ENST00000587945 ZFP91Q96JP5 570 aaPredicted RBP16.66■□□□□ 0.26
VMP1-206ENST00000587945 RIOX1Q9H6W3 641 aa16.66■□□□□ 0.26
VMP1-206ENST00000587945 SORBS3O60504 671 aa16.65■□□□□ 0.26
VMP1-206ENST00000587945 GHRHRQ02643 423 aa16.65■□□□□ 0.26
VMP1-206ENST00000587945 MB21D2Q8IYB1 491 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms