RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 FOXP4Q8IVH2 680 aaPredicted RBP6.57□□□□□ -1.36
SDF2-206ENST00000587788 ZNF444Q8N0Y2 327 aaPredicted RBP6.57□□□□□ -1.36
SDF2-206ENST00000587788 ZNF384Q8TF68 577 aa6.57□□□□□ -1.36
SDF2-206ENST00000587788 RNF26Q9BY78 433 aaPredicted RBP6.57□□□□□ -1.36
SDF2-206ENST00000587788 TRIM5Q9C035 493 aa6.57□□□□□ -1.36
SDF2-206ENST00000587788 DHX36Q9H2U1 1008 aaKnown RBP6.57□□□□□ -1.36
SDF2-206ENST00000587788 GOLPH3LQ9H4A5 285 aa6.57□□□□□ -1.36
SDF2-206ENST00000587788 TDRD3Q9H7E2 651 aaKnown RBP6.57□□□□□ -1.36
SDF2-206ENST00000587788 DCP1AQ9NPI6 582 aaPredicted RBP6.57□□□□□ -1.36
SDF2-206ENST00000587788 USP40Q9NVE5 1235 aa6.57□□□□□ -1.36
SDF2-206ENST00000587788 RBM28Q9NW13 759 aaKnown RBP6.57□□□□□ -1.36
SDF2-206ENST00000587788 ABT1Q9ULW3 272 aaKnown RBP6.57□□□□□ -1.36
SDF2-206ENST00000587788 FZD1Q9UP38 647 aa6.57□□□□□ -1.36
SDF2-206ENST00000587788 PHIPQ8WWQ0 1821 aa6.57□□□□□ -1.36
SDF2-206ENST00000587788 PCNTO95613 3336 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 BAZ2AQ9UIF9 1905 aaKnown RBP6.56□□□□□ -1.36
SDF2-206ENST00000587788 DOCK1Q14185 1865 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 RASSF10A6NK89 507 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 DTNBO60941 627 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 DDAH1O94760 285 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 ZNF202O95125 648 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 MMP1P03956 469 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 CDC27P30260 824 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 BTDP43251 543 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 VEGFBP49765 207 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 NDUFA8P51970 172 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 RBM5P52756 815 aaKnown RBP eCLIP6.56□□□□□ -1.36
SDF2-206ENST00000587788 CACNB3P54284 484 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 DYNLL1P63167 89 aaKnown RBP6.56□□□□□ -1.36
SDF2-206ENST00000587788 AXDND1Q5T1B0 1012 aaPredicted RBP6.56□□□□□ -1.36
SDF2-206ENST00000587788 FKBP1CQ5VVH2 108 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 APOBEC3HQ6NTF7 200 aaKnown RBP6.56□□□□□ -1.36
SDF2-206ENST00000587788 KANK3Q6NY19 840 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 MTERF4Q7Z6M4 381 aaKnown RBP6.56□□□□□ -1.36
SDF2-206ENST00000587788 CATIPQ7Z7H3 387 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 SAPCD2Q86UD0 394 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 MICU3Q86XE3 530 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 NOSTRINQ8IVI9 506 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 DRC7Q8IY82 874 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 TEX11Q8IYF3 940 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 FAM177A1Q8N128 213 aaPredicted RBP6.56□□□□□ -1.36
SDF2-206ENST00000587788 CRACR2BQ8N4Y2 399 aaPredicted RBP6.56□□□□□ -1.36
SDF2-206ENST00000587788 FANCBQ8NB91 859 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 KIAA1524Q8TCG1 905 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 TGFBRAP1Q8WUH2 860 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 MRGPRX2Q96LB1 330 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 DNAJC25Q9H1X3 360 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 MKNK2Q9HBH9 465 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 TOMM22Q9NS69 142 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 MCM9Q9NXL9 1143 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 IMPACTQ9P2X3 320 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 CLIC4Q9Y696 253 aa6.56□□□□□ -1.36
SDF2-206ENST00000587788 DYNC1I1O14576 645 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 IKBKBO14920 756 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 PRPF3O43395 683 aaKnown RBP6.55□□□□□ -1.36
SDF2-206ENST00000587788 NRDCO43847 1150 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 ENTPD3O75355 529 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 SYKP43405 635 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 GSDMDP57764 484 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 RHBDL3P58872 404 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 NLRP12P59046 1061 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 DHX9Q08211 1270 aaKnown RBP6.55□□□□□ -1.36
SDF2-206ENST00000587788 GRM1Q13255 1194 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 NR5A1Q13285 461 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 PTPAQ15257 358 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 SEC23AQ15436 765 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 DEFB115Q30KQ5 88 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 CT47A1Q5JQC4 288 aaPredicted RBP6.55□□□□□ -1.36
SDF2-206ENST00000587788 IFIT1BQ5T764 474 aaKnown RBP6.55□□□□□ -1.36
SDF2-206ENST00000587788 RESP18Q5W5W9 173 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 CYP4F22Q6NT55 531 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 APOBEC3FQ8IUX4 373 aaKnown RBP6.55□□□□□ -1.36
SDF2-206ENST00000587788 ZNF654Q8IZM8 581 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 SH3RF3Q8TEJ3 882 aaPredicted RBP6.55□□□□□ -1.36
SDF2-206ENST00000587788 SDR42E1Q8WUS8 393 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 ZSCAN10Q96SZ4 725 aaPredicted RBP6.55□□□□□ -1.36
SDF2-206ENST00000587788 MAP7D2Q96T17 732 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 MAP3K14Q99558 947 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 PYM1Q9BRP8 204 aaKnown RBP6.55□□□□□ -1.36
SDF2-206ENST00000587788 IDI2Q9BXS1 227 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 SLC26A6Q9BXS9 759 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 VEZTQ9HBM0 779 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 GBA2Q9HCG7 927 aaPredicted RBP6.55□□□□□ -1.36
SDF2-206ENST00000587788 BRMS1Q9HCU9 246 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 TCP11L1Q9NUJ3 509 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 FAM13BQ9NYF5 915 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 PI4KBQ9UBF8 816 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 ZNF70Q9UC06 446 aaPredicted RBP6.55□□□□□ -1.36
SDF2-206ENST00000587788 CLIP2Q9UDT6 1046 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 SWAP70Q9UH65 585 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 GNEQ9Y223 722 aaKnown RBP6.55□□□□□ -1.36
SDF2-206ENST00000587788 HPSEQ9Y251 543 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 DAGLAQ9Y4D2 1042 aa6.55□□□□□ -1.36
SDF2-206ENST00000587788 MYH15Q9Y2K3 1946 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 A0A1B0GVL5 298 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 KIF28PB7ZC32 967 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 TCP10L2B9ZVM9 353 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 M0R2N6 131 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 AP5Z1O43299 807 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 CBFA2T2O43439 604 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms