RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 MFSD6Q6ZSS7 791 aa7.54□□□□□ -1.2
SDF2-205ENST00000587629 DEFB128Q7Z7B8 93 aa7.54□□□□□ -1.2
SDF2-205ENST00000587629 TBC1D10CQ8IV04 446 aa7.54□□□□□ -1.2
SDF2-205ENST00000587629 MICALL1Q8N3F8 863 aa7.54□□□□□ -1.2
SDF2-205ENST00000587629 OR6J1Q8NGC5 347 aa7.54□□□□□ -1.2
SDF2-205ENST00000587629 MORC4Q8TE76 937 aa7.54□□□□□ -1.2
SDF2-205ENST00000587629 COPS5Q92905 334 aa7.54□□□□□ -1.2
SDF2-205ENST00000587629 UBA5Q9GZZ9 404 aa7.54□□□□□ -1.2
SDF2-205ENST00000587629 ALDH8A1Q9H2A2 487 aaPredicted RBP7.54□□□□□ -1.2
SDF2-205ENST00000587629 SLC28A3Q9HAS3 691 aa7.54□□□□□ -1.2
SDF2-205ENST00000587629 GPHNQ9NQX3 736 aaPredicted RBP7.54□□□□□ -1.2
SDF2-205ENST00000587629 TCP11L1Q9NUJ3 509 aa7.54□□□□□ -1.2
SDF2-205ENST00000587629 Q9Y3F1 56 aa7.54□□□□□ -1.2
SDF2-205ENST00000587629 SLC4A7Q9Y6M7 1214 aa7.54□□□□□ -1.2
SDF2-205ENST00000587629 CCDC171Q6TFL3 1326 aa7.53□□□□□ -1.2
SDF2-205ENST00000587629 SDSP20132 328 aa7.53□□□□□ -1.2
SDF2-205ENST00000587629 CPT1AP50416 773 aa7.53□□□□□ -1.2
SDF2-205ENST00000587629 RPS6P62753 249 aaKnown RBP7.53□□□□□ -1.2
SDF2-205ENST00000587629 PURAQ00577 322 aaKnown RBP7.53□□□□□ -1.2
SDF2-205ENST00000587629 ZNF543Q08ER8 600 aa7.53□□□□□ -1.2
SDF2-205ENST00000587629 HDAC1Q13547 482 aaPredicted RBP7.53□□□□□ -1.2
SDF2-205ENST00000587629 TTLL4Q14679 1199 aa7.53□□□□□ -1.2
SDF2-205ENST00000587629 RAB30Q15771 203 aa7.53□□□□□ -1.2
SDF2-205ENST00000587629 IER5LQ5T953 404 aa7.53□□□□□ -1.2
SDF2-205ENST00000587629 RPUSD2Q8IZ73 545 aaKnown RBP7.53□□□□□ -1.2
SDF2-205ENST00000587629 TBC1D5Q92609 795 aa7.53□□□□□ -1.2
SDF2-205ENST00000587629 SYMPKQ92797 1274 aaKnown RBP7.53□□□□□ -1.2
SDF2-205ENST00000587629 VWCEQ96DN2 955 aa7.53□□□□□ -1.2
SDF2-205ENST00000587629 MTG1Q9BT17 334 aaPredicted RBP7.53□□□□□ -1.2
SDF2-205ENST00000587629 MTIF3Q9H2K0 278 aaKnown RBP7.53□□□□□ -1.2
SDF2-205ENST00000587629 CERS4Q9HA82 394 aa7.53□□□□□ -1.2
SDF2-205ENST00000587629 VAT1LQ9HCJ6 419 aa7.53□□□□□ -1.2
SDF2-205ENST00000587629 POLR3EQ9NVU0 708 aa7.53□□□□□ -1.2
SDF2-205ENST00000587629 CHD9Q3L8U1 2897 aa7.53□□□□□ -1.2
SDF2-205ENST00000587629 TNKSO95271 1327 aa7.52□□□□□ -1.2
SDF2-205ENST00000587629 NEDD4P46934 1319 aa7.52□□□□□ -1.2
SDF2-205ENST00000587629 RBM47A0AV96 593 aaKnown RBP7.52□□□□□ -1.21
SDF2-205ENST00000587629 RFXAPO00287 272 aa7.52□□□□□ -1.21
SDF2-205ENST00000587629 ZNF213O14771 459 aa7.52□□□□□ -1.21
SDF2-205ENST00000587629 DHX16O60231 1041 aaKnown RBP7.52□□□□□ -1.21
SDF2-205ENST00000587629 KDM4AO75164 1064 aa7.52□□□□□ -1.21
SDF2-205ENST00000587629 SUPT20HL2P0C7V6 817 aa7.52□□□□□ -1.21
SDF2-205ENST00000587629 TXNP10599 105 aaKnown RBP7.52□□□□□ -1.21
SDF2-205ENST00000587629 ATP2A2P16615 1042 aaKnown RBP7.52□□□□□ -1.21
SDF2-205ENST00000587629 PPP2R5BQ15173 497 aa7.52□□□□□ -1.21
SDF2-205ENST00000587629 BRDTQ58F21 947 aaPredicted RBP7.52□□□□□ -1.21
SDF2-205ENST00000587629 TJAP1Q5JTD0 557 aa7.52□□□□□ -1.21
SDF2-205ENST00000587629 PPP2R2DQ66LE6 453 aa7.52□□□□□ -1.21
SDF2-205ENST00000587629 CWC27Q6UX04 472 aaKnown RBP7.52□□□□□ -1.21
SDF2-205ENST00000587629 SEPT14Q6ZU15 432 aa7.52□□□□□ -1.21
SDF2-205ENST00000587629 CHST3Q7LGC8 479 aa7.52□□□□□ -1.21
SDF2-205ENST00000587629 ESR2Q92731 530 aa7.52□□□□□ -1.21
SDF2-205ENST00000587629 YTHDC1Q96MU7 727 aaKnown RBP7.52□□□□□ -1.21
SDF2-205ENST00000587629 TTC14Q96N46 770 aa7.52□□□□□ -1.21
SDF2-205ENST00000587629 MPHOSPH6Q99547 160 aaKnown RBP7.52□□□□□ -1.21
SDF2-205ENST00000587629 FTOQ9C0B1 505 aaKnown RBP eCLIP7.52□□□□□ -1.21
SDF2-205ENST00000587629 LRRC37A2A6NM11 1700 aa7.52□□□□□ -1.21
SDF2-205ENST00000587629 LCTP09848 1927 aa7.51□□□□□ -1.21
SDF2-205ENST00000587629 B4E1Z4 1266 aa7.51□□□□□ -1.21
SDF2-205ENST00000587629 SORBS3O60504 671 aa7.51□□□□□ -1.21
SDF2-205ENST00000587629 ARIH2O95376 493 aa7.51□□□□□ -1.21
SDF2-205ENST00000587629 IGHDP01880 384 aa7.51□□□□□ -1.21
SDF2-205ENST00000587629 CA3P07451 260 aa7.51□□□□□ -1.21
SDF2-205ENST00000587629 SNHG28P0DPA3 235 aa7.51□□□□□ -1.21
SDF2-205ENST00000587629 CDC37Q16543 378 aaPredicted RBP7.51□□□□□ -1.21
SDF2-205ENST00000587629 LY6KQ17RY6 165 aa7.51□□□□□ -1.21
SDF2-205ENST00000587629 PLEKHM2Q8IWE5 1019 aa7.51□□□□□ -1.21
SDF2-205ENST00000587629 ADGRF4Q8IZF3 695 aa7.51□□□□□ -1.21
SDF2-205ENST00000587629 RETREG2Q8NC44 543 aa7.51□□□□□ -1.21
SDF2-205ENST00000587629 PNMA1Q8ND90 353 aa7.51□□□□□ -1.21
SDF2-205ENST00000587629 SCFD2Q8WU76 684 aa7.51□□□□□ -1.21
SDF2-205ENST00000587629 AFG1LQ8WV93 481 aa7.51□□□□□ -1.21
SDF2-205ENST00000587629 TAAR1Q96RJ0 339 aa7.51□□□□□ -1.21
SDF2-205ENST00000587629 SEZ6LQ9BYH1 1024 aa7.51□□□□□ -1.21
SDF2-205ENST00000587629 RNF41Q9H4P4 317 aaPredicted RBP7.51□□□□□ -1.21
SDF2-205ENST00000587629 KAT14Q9H8E8 782 aa7.51□□□□□ -1.21
SDF2-205ENST00000587629 DIAPH3Q9NSV4 1193 aa7.51□□□□□ -1.21
SDF2-205ENST00000587629 NOD1Q9Y239 953 aa7.51□□□□□ -1.21
SDF2-205ENST00000587629 ZMYM6O95789 1325 aa7.51□□□□□ -1.21
SDF2-205ENST00000587629 WDR19Q8NEZ3 1342 aa7.51□□□□□ -1.21
SDF2-205ENST00000587629 RAD50Q92878 1312 aa7.51□□□□□ -1.21
SDF2-205ENST00000587629 A6NJR5 290 aa7.5□□□□□ -1.21
SDF2-205ENST00000587629 B4DLN1 442 aa7.5□□□□□ -1.21
SDF2-205ENST00000587629 TNFRSF10AO00220 468 aa7.5□□□□□ -1.21
SDF2-205ENST00000587629 NKRFO15226 690 aaKnown RBP eCLIP7.5□□□□□ -1.21
SDF2-205ENST00000587629 KPNA6O60684 536 aa7.5□□□□□ -1.21
SDF2-205ENST00000587629 IQCF3P0C7M6 154 aa7.5□□□□□ -1.21
SDF2-205ENST00000587629 PCP11498 1178 aaKnown RBP7.5□□□□□ -1.21
SDF2-205ENST00000587629 EIF2AK2P19525 551 aaKnown RBP7.5□□□□□ -1.21
SDF2-205ENST00000587629 EDNRBP24530 442 aa7.5□□□□□ -1.21
SDF2-205ENST00000587629 MRPL12P52815 198 aaKnown RBP7.5□□□□□ -1.21
SDF2-205ENST00000587629 MFAP1P55081 439 aaKnown RBP7.5□□□□□ -1.21
SDF2-205ENST00000587629 MRPS5P82675 430 aaKnown RBP7.5□□□□□ -1.21
SDF2-205ENST00000587629 TFF2Q03403 129 aa7.5□□□□□ -1.21
SDF2-205ENST00000587629 SKIV2LQ15477 1246 aaKnown RBP7.5□□□□□ -1.21
SDF2-205ENST00000587629 PTGISQ16647 500 aa7.5□□□□□ -1.21
SDF2-205ENST00000587629 QRICH1Q2TAL8 776 aa7.5□□□□□ -1.21
SDF2-205ENST00000587629 TMEM67Q5HYA8 995 aa7.5□□□□□ -1.21
SDF2-205ENST00000587629 GPATCH4Q5T3I0 446 aaKnown RBP7.5□□□□□ -1.21
SDF2-205ENST00000587629 KRT40Q6A162 431 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms