RNA–Protein interactions for RNA: ENST00000587580.1

CHAF1A-205, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 3

Gene CHAF1A, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-205ENST00000587580 CCDC82Q8N4S0 544 aa27.17■■□□□ 1.94
CHAF1A-205ENST00000587580 SAMD3Q8N6K7 520 aa27.17■■□□□ 1.94
CHAF1A-205ENST00000587580 PCSK9Q8NBP7 692 aaKnown RBP27.17■■□□□ 1.94
CHAF1A-205ENST00000587580 WDR11Q9BZH6 1224 aa27.17■■□□□ 1.94
CHAF1A-205ENST00000587580 AP5M1Q9H0R1 490 aa27.17■■□□□ 1.94
CHAF1A-205ENST00000587580 RBM28Q9NW13 759 aaKnown RBP27.17■■□□□ 1.94
CHAF1A-205ENST00000587580 RBM47A0AV96 593 aaKnown RBP27.16■■□□□ 1.94
CHAF1A-205ENST00000587580 GOLGA8AA7E2F4 631 aa27.16■■□□□ 1.94
CHAF1A-205ENST00000587580 GOLGA8BA8MQT2 603 aa27.16■■□□□ 1.94
CHAF1A-205ENST00000587580 GCOM1H8Y6P7 765 aaPredicted RBP27.16■■□□□ 1.94
CHAF1A-205ENST00000587580 CTAGE5O15320 804 aa27.16■■□□□ 1.94
CHAF1A-205ENST00000587580 DYNC1LI2O43237 492 aaPredicted RBP27.16■■□□□ 1.94
CHAF1A-205ENST00000587580 POLR2MP0CAP2 368 aa27.16■■□□□ 1.94
CHAF1A-205ENST00000587580 EIF2AK2P19525 551 aaKnown RBP27.16■■□□□ 1.94
CHAF1A-205ENST00000587580 CASTP20810 708 aaKnown RBP27.16■■□□□ 1.94
CHAF1A-205ENST00000587580 RPS6KB1P23443 525 aa27.16■■□□□ 1.94
CHAF1A-205ENST00000587580 BEX3Q00994 111 aa27.16■■□□□ 1.94
CHAF1A-205ENST00000587580 SNX17Q15036 470 aa27.16■■□□□ 1.94
CHAF1A-205ENST00000587580 RTN1Q16799 776 aa27.16■■□□□ 1.94
CHAF1A-205ENST00000587580 DUSP28Q4G0W2 176 aa27.16■■□□□ 1.94
CHAF1A-205ENST00000587580 GNASQ5JWF2 1037 aa27.16■■□□□ 1.94
CHAF1A-205ENST00000587580 IWS1Q96ST2 819 aa27.16■■□□□ 1.94
CHAF1A-205ENST00000587580 PXMP2Q9NR77 195 aa27.16■■□□□ 1.94
CHAF1A-205ENST00000587580 NAP1L2Q9ULW6 460 aaPredicted RBP27.16■■□□□ 1.94
CHAF1A-205ENST00000587580 ASGR1P07306 291 aa27.15■■□□□ 1.94
CHAF1A-205ENST00000587580 NKX3-2P78367 333 aa27.15■■□□□ 1.94
CHAF1A-205ENST00000587580 TRIM60Q495X7 471 aa27.15■■□□□ 1.94
CHAF1A-205ENST00000587580 STARD7Q9NQZ5 370 aa27.15■■□□□ 1.94
CHAF1A-205ENST00000587580 COLQQ9Y215 455 aaPredicted RBP27.15■■□□□ 1.94
CHAF1A-205ENST00000587580 Q9Y3F1 56 aa27.15■■□□□ 1.94
CHAF1A-205ENST00000587580 APOBRQ0VD83 1088 aa27.14■■□□□ 1.94
CHAF1A-205ENST00000587580 PPP2R5BQ15173 497 aa27.14■■□□□ 1.94
CHAF1A-205ENST00000587580 STXBP2Q15833 593 aa27.14■■□□□ 1.94
CHAF1A-205ENST00000587580 SCFD2Q8WU76 684 aa27.14■■□□□ 1.94
CHAF1A-205ENST00000587580 BRF1Q92994 677 aa27.14■■□□□ 1.94
CHAF1A-205ENST00000587580 CNTNAP5Q8WYK1 1306 aa27.14■■□□□ 1.93
CHAF1A-205ENST00000587580 hCG_1642624A0A1W2PR95 340 aa27.13■■□□□ 1.93
CHAF1A-205ENST00000587580 RCAN1P53805 252 aa27.13■■□□□ 1.93
CHAF1A-205ENST00000587580 FSCN1Q16658 493 aaKnown RBP27.13■■□□□ 1.93
CHAF1A-205ENST00000587580 C1orf53Q5VUE5 145 aa27.13■■□□□ 1.93
CHAF1A-205ENST00000587580 GLT1D1Q96MS3 346 aa27.13■■□□□ 1.93
CHAF1A-205ENST00000587580 KIAA1217Q5T5P2 1943 aa27.12■■□□□ 1.93
CHAF1A-205ENST00000587580 NR3C2P08235 984 aa27.12■■□□□ 1.93
CHAF1A-205ENST00000587580 FCHSD1Q86WN1 690 aa27.12■■□□□ 1.93
CHAF1A-205ENST00000587580 PDCD2LQ9BRP1 358 aa27.12■■□□□ 1.93
CHAF1A-205ENST00000587580 PCDH10Q9P2E7 1040 aa27.12■■□□□ 1.93
CHAF1A-205ENST00000587580 NKRFO15226 690 aaKnown RBP eCLIP27.11■■□□□ 1.93
CHAF1A-205ENST00000587580 METAP2P50579 478 aaKnown RBP eCLIP27.11■■□□□ 1.93
CHAF1A-205ENST00000587580 TTLL4Q14679 1199 aa27.11■■□□□ 1.93
CHAF1A-205ENST00000587580 SEPT14Q6ZU15 432 aa27.11■■□□□ 1.93
CHAF1A-205ENST00000587580 OR6J1Q8NGC5 347 aa27.11■■□□□ 1.93
CHAF1A-205ENST00000587580 ZEB2O60315 1214 aa27.1■■□□□ 1.93
CHAF1A-205ENST00000587580 ARIH2O95376 493 aa27.1■■□□□ 1.93
CHAF1A-205ENST00000587580 TXNP10599 105 aaKnown RBP27.1■■□□□ 1.93
CHAF1A-205ENST00000587580 CDC27P30260 824 aa27.1■■□□□ 1.93
CHAF1A-205ENST00000587580 PGM5Q15124 567 aa27.1■■□□□ 1.93
CHAF1A-205ENST00000587580 RUFY3Q7L099 469 aa27.1■■□□□ 1.93
CHAF1A-205ENST00000587580 FBXL16Q8N461 479 aa27.1■■□□□ 1.93
CHAF1A-205ENST00000587580 CUL5Q93034 780 aa27.1■■□□□ 1.93
CHAF1A-205ENST00000587580 VTI1AQ96AJ9 217 aa27.1■■□□□ 1.93
CHAF1A-205ENST00000587580 AGXT2Q9BYV1 514 aa27.1■■□□□ 1.93
CHAF1A-205ENST00000587580 ELP1O95163 1332 aa27.1■■□□□ 1.93
CHAF1A-205ENST00000587580 MYCLP12524 364 aaPredicted RBP27.09■■□□□ 1.93
CHAF1A-205ENST00000587580 HEATR3Q7Z4Q2 680 aa27.09■■□□□ 1.93
CHAF1A-205ENST00000587580 SMARCC2Q8TAQ2 1214 aa27.09■■□□□ 1.93
CHAF1A-205ENST00000587580 COPS5Q92905 334 aa27.09■■□□□ 1.93
CHAF1A-205ENST00000587580 ZSWIM6Q9HCJ5 1215 aa27.09■■□□□ 1.93
CHAF1A-205ENST00000587580 PRDM5Q9NQX1 630 aaPredicted RBP27.09■■□□□ 1.93
CHAF1A-205ENST00000587580 FAM217BQ9NTX9 383 aaPredicted RBP27.09■■□□□ 1.93
CHAF1A-205ENST00000587580 PRKAG2Q9UGJ0 569 aa27.09■■□□□ 1.93
CHAF1A-205ENST00000587580 PQBP1O60828 265 aaKnown RBP27.08■■□□□ 1.93
CHAF1A-205ENST00000587580 EIF3JO75822 258 aaKnown RBP27.08■■□□□ 1.93
CHAF1A-205ENST00000587580 TLE2Q04725 743 aa27.08■■□□□ 1.93
CHAF1A-205ENST00000587580 FUT2Q10981 343 aa27.08■■□□□ 1.93
CHAF1A-205ENST00000587580 HABP4Q5JVS0 413 aaKnown RBP27.08■■□□□ 1.93
CHAF1A-205ENST00000587580 CXCL17Q6UXB2 119 aa27.08■■□□□ 1.93
CHAF1A-205ENST00000587580 IL31RAQ8NI17 732 aa27.08■■□□□ 1.93
CHAF1A-205ENST00000587580 GPKOWQ92917 476 aaPredicted RBP eCLIP27.08■■□□□ 1.93
CHAF1A-205ENST00000587580 RBM27Q9P2N5 1060 aaKnown RBP27.08■■□□□ 1.93
CHAF1A-205ENST00000587580 CYP46A1Q9Y6A2 500 aa27.08■■□□□ 1.93
CHAF1A-205ENST00000587580 A0A0U1RQG5 324 aaPredicted RBP27.07■■□□□ 1.92
CHAF1A-205ENST00000587580 MAGEA10P43363 369 aaPredicted RBP27.07■■□□□ 1.92
CHAF1A-205ENST00000587580 USP17L6PQ6QN14 398 aa27.07■■□□□ 1.92
CHAF1A-205ENST00000587580 TM6SF1Q9BZW5 370 aa27.07■■□□□ 1.92
CHAF1A-205ENST00000587580 PRO3102Q9H379 93 aa27.07■■□□□ 1.92
CHAF1A-205ENST00000587580 PDLIM7Q9NR12 457 aa27.07■■□□□ 1.92
CHAF1A-205ENST00000587580 NID2Q14112 1375 aa27.07■■□□□ 1.92
CHAF1A-205ENST00000587580 DNAH12Q6ZR08 3092 aa27.06■■□□□ 1.92
CHAF1A-205ENST00000587580 CCDC196A0A1B0GTZ2 297 aa27.06■■□□□ 1.92
CHAF1A-205ENST00000587580 CABYRO75952 493 aa27.06■■□□□ 1.92
CHAF1A-205ENST00000587580 CCND2P30279 289 aa27.06■■□□□ 1.92
CHAF1A-205ENST00000587580 CPT1AP50416 773 aa27.06■■□□□ 1.92
CHAF1A-205ENST00000587580 WWC2Q6AWC2 1192 aa27.06■■□□□ 1.92
CHAF1A-205ENST00000587580 CCDC62Q6P9F0 684 aa27.06■■□□□ 1.92
CHAF1A-205ENST00000587580 GDF15Q99988 308 aa27.06■■□□□ 1.92
CHAF1A-205ENST00000587580 UPF3BQ9BZI7 483 aaKnown RBP27.06■■□□□ 1.92
CHAF1A-205ENST00000587580 FRMPD4Q14CM0 1322 aa27.06■■□□□ 1.92
CHAF1A-205ENST00000587580 LTBP2Q14767 1821 aa27.06■■□□□ 1.92
CHAF1A-205ENST00000587580 PIK3CDO00329 1044 aa27.05■■□□□ 1.92
CHAF1A-205ENST00000587580 MEIS2O14770 477 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms