RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 USP17L6PQ6QN14 398 aa11.78□□□□□ -0.52
CLPTM1-207ENST00000587537 POTEEQ6S8J3 1075 aa11.78□□□□□ -0.52
CLPTM1-207ENST00000587537 NIPA1Q7RTP0 329 aa11.78□□□□□ -0.52
CLPTM1-207ENST00000587537 PLEKHH3Q7Z736 793 aa11.78□□□□□ -0.52
CLPTM1-207ENST00000587537 KCNG4Q8TDN1 519 aa11.78□□□□□ -0.52
CLPTM1-207ENST00000587537 OXER1Q8TDS5 423 aa11.78□□□□□ -0.52
CLPTM1-207ENST00000587537 SYTL5Q8TDW5 730 aaPredicted RBP11.78□□□□□ -0.52
CLPTM1-207ENST00000587537 TBCKQ8TEA7 893 aa11.78□□□□□ -0.52
CLPTM1-207ENST00000587537 TNPO1Q92973 898 aaKnown RBP11.78□□□□□ -0.52
CLPTM1-207ENST00000587537 RTEL1Q9NZ71 1219 aa11.78□□□□□ -0.52
CLPTM1-207ENST00000587537 PLXNB2O15031 1838 aa11.78□□□□□ -0.52
CLPTM1-207ENST00000587537 RPTORQ8N122 1335 aa11.78□□□□□ -0.52
CLPTM1-207ENST00000587537 DNAJC25-GNG10A0A024R161 153 aa11.77□□□□□ -0.53
CLPTM1-207ENST00000587537 CYP3A7-CYP3A51PA0A087WV96 503 aa11.77□□□□□ -0.53
CLPTM1-207ENST00000587537 ASB14A6NK59 587 aa11.77□□□□□ -0.53
CLPTM1-207ENST00000587537 KIF28PB7ZC32 967 aa11.77□□□□□ -0.53
CLPTM1-207ENST00000587537 TBX3O15119 743 aa11.77□□□□□ -0.53
CLPTM1-207ENST00000587537 MAFGO15525 162 aa11.77□□□□□ -0.53
CLPTM1-207ENST00000587537 PTPREP23469 700 aa11.77□□□□□ -0.53
CLPTM1-207ENST00000587537 CYP3A7P24462 503 aa11.77□□□□□ -0.53
CLPTM1-207ENST00000587537 NASPP49321 788 aaPredicted RBP11.77□□□□□ -0.53
CLPTM1-207ENST00000587537 FCGRTP55899 365 aa11.77□□□□□ -0.53
CLPTM1-207ENST00000587537 ARHGAP4P98171 946 aa11.77□□□□□ -0.53
CLPTM1-207ENST00000587537 GRB14Q14449 540 aa11.77□□□□□ -0.53
CLPTM1-207ENST00000587537 UBE2SQ16763 222 aa11.77□□□□□ -0.53
CLPTM1-207ENST00000587537 Q3C1V9 767 aa11.77□□□□□ -0.53
CLPTM1-207ENST00000587537 TTC38Q5R3I4 469 aa11.77□□□□□ -0.53
CLPTM1-207ENST00000587537 ARHGEF16Q5VV41 709 aa11.77□□□□□ -0.53
CLPTM1-207ENST00000587537 GPR142Q7Z601 462 aa11.77□□□□□ -0.53
CLPTM1-207ENST00000587537 TRMT44Q8IYL2 757 aaKnown RBP11.77□□□□□ -0.53
CLPTM1-207ENST00000587537 CDHR1Q96JP9 859 aa11.77□□□□□ -0.53
CLPTM1-207ENST00000587537 RMDN3Q96TC7 470 aa11.77□□□□□ -0.53
CLPTM1-207ENST00000587537 MYH7BA7E2Y1 1941 aa11.77□□□□□ -0.53
CLPTM1-207ENST00000587537 ZNFX1Q9P2E3 1918 aaKnown RBP11.77□□□□□ -0.53
CLPTM1-207ENST00000587537 ELP1O95163 1332 aa11.77□□□□□ -0.53
CLPTM1-207ENST00000587537 HOXD10P28358 340 aa11.76□□□□□ -0.53
CLPTM1-207ENST00000587537 CCND2P30279 289 aa11.76□□□□□ -0.53
CLPTM1-207ENST00000587537 HOXA13P31271 388 aaPredicted RBP11.76□□□□□ -0.53
CLPTM1-207ENST00000587537 PRPHP41219 470 aa11.76□□□□□ -0.53
CLPTM1-207ENST00000587537 SP3Q02447 781 aa11.76□□□□□ -0.53
CLPTM1-207ENST00000587537 INF2Q27J81 1249 aa11.76□□□□□ -0.53
CLPTM1-207ENST00000587537 WDR78Q5VTH9 848 aa11.76□□□□□ -0.53
CLPTM1-207ENST00000587537 ANO1Q5XXA6 986 aa11.76□□□□□ -0.53
CLPTM1-207ENST00000587537 ARL6IP4Q66PJ3 421 aaKnown RBP11.76□□□□□ -0.53
CLPTM1-207ENST00000587537 KCNV1Q6PIU1 500 aa11.76□□□□□ -0.53
CLPTM1-207ENST00000587537 FCHSD1Q86WN1 690 aa11.76□□□□□ -0.53
CLPTM1-207ENST00000587537 FAM133AQ8N9E0 248 aa11.76□□□□□ -0.53
CLPTM1-207ENST00000587537 CRYGNQ8WXF5 182 aa11.76□□□□□ -0.53
CLPTM1-207ENST00000587537 PXMP2Q9NR77 195 aa11.76□□□□□ -0.53
CLPTM1-207ENST00000587537 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.76□□□□□ -0.53
CLPTM1-207ENST00000587537 RNF186Q9NXI6 227 aa11.76□□□□□ -0.53
CLPTM1-207ENST00000587537 CPA4Q9UI42 421 aa11.76□□□□□ -0.53
CLPTM1-207ENST00000587537 MGAMO43451 1857 aa11.76□□□□□ -0.53
CLPTM1-207ENST00000587537 CASP8AP2Q9UKL3 1982 aa11.76□□□□□ -0.53
CLPTM1-207ENST00000587537 PLXNA1Q9UIW2 1896 aa11.75□□□□□ -0.53
CLPTM1-207ENST00000587537 DTNBO60941 627 aa11.75□□□□□ -0.53
CLPTM1-207ENST00000587537 PPP6R2O75170 966 aa11.75□□□□□ -0.53
CLPTM1-207ENST00000587537 BAG4O95429 457 aaKnown RBP11.75□□□□□ -0.53
CLPTM1-207ENST00000587537 HOXC6P09630 235 aa11.75□□□□□ -0.53
CLPTM1-207ENST00000587537 ZNF76P36508 570 aa11.75□□□□□ -0.53
CLPTM1-207ENST00000587537 PRMT2P55345 433 aa11.75□□□□□ -0.53
CLPTM1-207ENST00000587537 LACTBP83111 547 aaPredicted RBP11.75□□□□□ -0.53
CLPTM1-207ENST00000587537 SLC39A14Q15043 492 aa11.75□□□□□ -0.53
CLPTM1-207ENST00000587537 STXBP2Q15833 593 aa11.75□□□□□ -0.53
CLPTM1-207ENST00000587537 GNPTABQ3T906 1256 aa11.75□□□□□ -0.53
CLPTM1-207ENST00000587537 Q4G0T1 1027 aa11.75□□□□□ -0.53
CLPTM1-207ENST00000587537 CEP55Q53EZ4 464 aa11.75□□□□□ -0.53
CLPTM1-207ENST00000587537 SLC30A10Q6XR72 485 aa11.75□□□□□ -0.53
CLPTM1-207ENST00000587537 SLFN12Q8IYM2 578 aa11.75□□□□□ -0.53
CLPTM1-207ENST00000587537 TMEM87AQ8NBN3 555 aa11.75□□□□□ -0.53
CLPTM1-207ENST00000587537 RASGRP4Q8TDF6 673 aa11.75□□□□□ -0.53
CLPTM1-207ENST00000587537 FERMT2Q96AC1 680 aa11.75□□□□□ -0.53
CLPTM1-207ENST00000587537 ERO1AQ96HE7 468 aa11.75□□□□□ -0.53
CLPTM1-207ENST00000587537 MBOAT7Q96N66 472 aa11.75□□□□□ -0.53
CLPTM1-207ENST00000587537 ZIC5Q96T25 663 aa11.75□□□□□ -0.53
CLPTM1-207ENST00000587537 NUDT12Q9BQG2 462 aa11.75□□□□□ -0.53
CLPTM1-207ENST00000587537 PDCD2LQ9BRP1 358 aa11.75□□□□□ -0.53
CLPTM1-207ENST00000587537 RAB34Q9BZG1 259 aa11.75□□□□□ -0.53
CLPTM1-207ENST00000587537 PORCNQ9H237 461 aa11.75□□□□□ -0.53
CLPTM1-207ENST00000587537 EFCC1Q9HA90 598 aa11.75□□□□□ -0.53
CLPTM1-207ENST00000587537 TMEM260Q9NX78 707 aa11.75□□□□□ -0.53
CLPTM1-207ENST00000587537 STK24Q9Y6E0 443 aa11.75□□□□□ -0.53
CLPTM1-207ENST00000587537 DDX11L8A8MPP1 907 aa11.74□□□□□ -0.53
CLPTM1-207ENST00000587537 TNPO2O14787 897 aaKnown RBP11.74□□□□□ -0.53
CLPTM1-207ENST00000587537 NEMFO60524 1076 aa11.74□□□□□ -0.53
CLPTM1-207ENST00000587537 CCNT1O60563 726 aaKnown RBP11.74□□□□□ -0.53
CLPTM1-207ENST00000587537 TRPA1O75762 1119 aa11.74□□□□□ -0.53
CLPTM1-207ENST00000587537 EIF3JO75822 258 aaKnown RBP11.74□□□□□ -0.53
CLPTM1-207ENST00000587537 NR3C2P08235 984 aa11.74□□□□□ -0.53
CLPTM1-207ENST00000587537 XRCC5P13010 732 aaKnown RBP11.74□□□□□ -0.53
CLPTM1-207ENST00000587537 NCLP19338 710 aaKnown RBP11.74□□□□□ -0.53
CLPTM1-207ENST00000587537 EDNRBP24530 442 aa11.74□□□□□ -0.53
CLPTM1-207ENST00000587537 ADORA2AP29274 412 aa11.74□□□□□ -0.53
CLPTM1-207ENST00000587537 RGS2P41220 211 aa11.74□□□□□ -0.53
CLPTM1-207ENST00000587537 ALDH5A1P51649 535 aaPredicted RBP11.74□□□□□ -0.53
CLPTM1-207ENST00000587537 DNM1Q05193 864 aaKnown RBP11.74□□□□□ -0.53
CLPTM1-207ENST00000587537 PGM5Q15124 567 aa11.74□□□□□ -0.53
CLPTM1-207ENST00000587537 STK38Q15208 465 aa11.74□□□□□ -0.53
CLPTM1-207ENST00000587537 LETM2Q2VYF4 491 aa11.74□□□□□ -0.53
CLPTM1-207ENST00000587537 MORN1Q5T089 497 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms