RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 RNF113AO15541 343 aaKnown RBP9.14□□□□□ -0.95
VMP1-204ENST00000587259 ARHGEF15O94989 841 aa9.14□□□□□ -0.95
VMP1-204ENST00000587259 HMGB1P09429 215 aaKnown RBP9.14□□□□□ -0.95
VMP1-204ENST00000587259 ALAS1P13196 640 aa9.14□□□□□ -0.95
VMP1-204ENST00000587259 PDIA4P13667 645 aaKnown RBP9.14□□□□□ -0.95
VMP1-204ENST00000587259 NEK4P51957 841 aa9.14□□□□□ -0.95
VMP1-204ENST00000587259 IKQ13123 557 aaPredicted RBP9.14□□□□□ -0.95
VMP1-204ENST00000587259 ANKRD1Q15327 319 aa9.14□□□□□ -0.95
VMP1-204ENST00000587259 TSGA10IPQ3SY00 556 aa9.14□□□□□ -0.95
VMP1-204ENST00000587259 SPRED2Q7Z698 418 aa9.14□□□□□ -0.95
VMP1-204ENST00000587259 TLK2Q86UE8 772 aa9.14□□□□□ -0.95
VMP1-204ENST00000587259 ZNF444Q8N0Y2 327 aaPredicted RBP9.14□□□□□ -0.95
VMP1-204ENST00000587259 MSL3Q8N5Y2 521 aaKnown RBP9.14□□□□□ -0.95
VMP1-204ENST00000587259 FAM133AQ8N9E0 248 aa9.14□□□□□ -0.95
VMP1-204ENST00000587259 PCSK9Q8NBP7 692 aaKnown RBP9.14□□□□□ -0.95
VMP1-204ENST00000587259 APPBP2Q92624 585 aa9.14□□□□□ -0.95
VMP1-204ENST00000587259 INTS4Q96HW7 963 aaKnown RBP9.14□□□□□ -0.95
VMP1-204ENST00000587259 ASB2Q96Q27 587 aa9.14□□□□□ -0.95
VMP1-204ENST00000587259 DSCC1Q9BVC3 393 aa9.14□□□□□ -0.95
VMP1-204ENST00000587259 SPC25Q9HBM1 224 aa9.14□□□□□ -0.95
VMP1-204ENST00000587259 IL23AQ9NPF7 189 aa9.14□□□□□ -0.95
VMP1-204ENST00000587259 RNF146Q9NTX7 359 aa9.14□□□□□ -0.95
VMP1-204ENST00000587259 THEGQ9P2T0 379 aa9.14□□□□□ -0.95
VMP1-204ENST00000587259 CTNNA3Q9UI47 895 aa9.14□□□□□ -0.95
VMP1-204ENST00000587259 FEM1BQ9UK73 627 aa9.14□□□□□ -0.95
VMP1-204ENST00000587259 GNEQ9Y223 722 aaKnown RBP9.14□□□□□ -0.95
VMP1-204ENST00000587259 RBM8AQ9Y5S9 174 aaKnown RBP9.14□□□□□ -0.95
VMP1-204ENST00000587259 GBF1Q92538 1859 aa9.14□□□□□ -0.95
VMP1-204ENST00000587259 MROH7Q68CQ1 1323 aa9.13□□□□□ -0.95
VMP1-204ENST00000587259 EPOPA6NHQ4 379 aa9.13□□□□□ -0.95
VMP1-204ENST00000587259 ZBBXA8MT70 800 aa9.13□□□□□ -0.95
VMP1-204ENST00000587259 TLR3O15455 904 aaKnown RBP9.13□□□□□ -0.95
VMP1-204ENST00000587259 TTLL1O95922 423 aa9.13□□□□□ -0.95
VMP1-204ENST00000587259 FGBP02675 491 aa9.13□□□□□ -0.95
VMP1-204ENST00000587259 CYP2C9P11712 490 aa9.13□□□□□ -0.95
VMP1-204ENST00000587259 BMP3P12645 472 aa9.13□□□□□ -0.95
VMP1-204ENST00000587259 KCNQ1P51787 676 aa9.13□□□□□ -0.95
VMP1-204ENST00000587259 NUCB2P80303 420 aa9.13□□□□□ -0.95
VMP1-204ENST00000587259 TFAP4Q01664 338 aa9.13□□□□□ -0.95
VMP1-204ENST00000587259 CTDSPL2Q05D32 466 aa9.13□□□□□ -0.95
VMP1-204ENST00000587259 ITGA7Q13683 1181 aa9.13□□□□□ -0.95
VMP1-204ENST00000587259 TTLL4Q14679 1199 aa9.13□□□□□ -0.95
VMP1-204ENST00000587259 NECTIN1Q15223 517 aa9.13□□□□□ -0.95
VMP1-204ENST00000587259 FSCN1Q16658 493 aaKnown RBP9.13□□□□□ -0.95
VMP1-204ENST00000587259 ZMYM1Q5SVZ6 1142 aa9.13□□□□□ -0.95
VMP1-204ENST00000587259 VPS53Q5VIR6 699 aa9.13□□□□□ -0.95
VMP1-204ENST00000587259 PSRC1Q6PGN9 363 aaPredicted RBP9.13□□□□□ -0.95
VMP1-204ENST00000587259 DEFB128Q7Z7B8 93 aa9.13□□□□□ -0.95
VMP1-204ENST00000587259 IFNL3Q8IZI9 196 aa9.13□□□□□ -0.95
VMP1-204ENST00000587259 CHST13Q8NET6 341 aa9.13□□□□□ -0.95
VMP1-204ENST00000587259 HERVK_113Q902F9 699 aa9.13□□□□□ -0.95
VMP1-204ENST00000587259 FAM227BQ96M60 508 aa9.13□□□□□ -0.95
VMP1-204ENST00000587259 TRERF1Q96PN7 1200 aa9.13□□□□□ -0.95
VMP1-204ENST00000587259 UHRF1Q96T88 793 aaPredicted RBP9.13□□□□□ -0.95
VMP1-204ENST00000587259 NOC4LQ9BVI4 516 aaKnown RBP9.13□□□□□ -0.95
VMP1-204ENST00000587259 SLKQ9H2G2 1235 aaPredicted RBP9.13□□□□□ -0.95
VMP1-204ENST00000587259 ACAD9Q9H845 621 aa9.13□□□□□ -0.95
VMP1-204ENST00000587259 TRMT13Q9NUP7 481 aaKnown RBP9.13□□□□□ -0.95
VMP1-204ENST00000587259 MSRAQ9UJ68 235 aa9.13□□□□□ -0.95
VMP1-204ENST00000587259 SNX14Q9Y5W7 946 aa9.13□□□□□ -0.95
VMP1-204ENST00000587259 CYP46A1Q9Y6A2 500 aa9.13□□□□□ -0.95
VMP1-204ENST00000587259 XIRP2A4UGR9 3374 aa9.12□□□□□ -0.95
VMP1-204ENST00000587259 TCF20Q9UGU0 1960 aaKnown RBP9.12□□□□□ -0.95
VMP1-204ENST00000587259 LRRC37A2A6NM11 1700 aa9.12□□□□□ -0.95
VMP1-204ENST00000587259 FOXP2O15409 715 aa9.12□□□□□ -0.95
VMP1-204ENST00000587259 TSPY3P0CV98 308 aa9.12□□□□□ -0.95
VMP1-204ENST00000587259 TSPY8P0CW00 308 aa9.12□□□□□ -0.95
VMP1-204ENST00000587259 SLC16A2P36021 539 aa9.12□□□□□ -0.95
VMP1-204ENST00000587259 AKNAD1Q5T1N1 836 aa9.12□□□□□ -0.95
VMP1-204ENST00000587259 CREB3L3Q68CJ9 461 aa9.12□□□□□ -0.95
VMP1-204ENST00000587259 TTBK2Q6IQ55 1244 aa9.12□□□□□ -0.95
VMP1-204ENST00000587259 TAPT1Q6NXT6 567 aa9.12□□□□□ -0.95
VMP1-204ENST00000587259 NSMFQ6X4W1 530 aa9.12□□□□□ -0.95
VMP1-204ENST00000587259 SLC43A3Q8NBI5 491 aa9.12□□□□□ -0.95
VMP1-204ENST00000587259 GMCL1P1Q8NEA9 526 aa9.12□□□□□ -0.95
VMP1-204ENST00000587259 MKL1Q969V6 931 aa9.12□□□□□ -0.95
VMP1-204ENST00000587259 ZSCAN31Q96LW9 406 aaPredicted RBP9.12□□□□□ -0.95
VMP1-204ENST00000587259 GBP4Q96PP9 640 aa9.12□□□□□ -0.95
VMP1-204ENST00000587259 HS3ST6Q96QI5 342 aa9.12□□□□□ -0.95
VMP1-204ENST00000587259 SLC28A3Q9HAS3 691 aa9.12□□□□□ -0.95
VMP1-204ENST00000587259 SH2B1Q9NRF2 756 aaPredicted RBP9.12□□□□□ -0.95
VMP1-204ENST00000587259 LCTP09848 1927 aa9.11□□□□□ -0.95
VMP1-204ENST00000587259 MYH15Q9Y2K3 1946 aa9.11□□□□□ -0.95
VMP1-204ENST00000587259 ZMYM6O95789 1325 aa9.11□□□□□ -0.95
VMP1-204ENST00000587259 FRMPD2Q68DX3 1309 aaPredicted RBP9.11□□□□□ -0.95
VMP1-204ENST00000587259 PATL2C9JE40 543 aaKnown RBP9.11□□□□□ -0.95
VMP1-204ENST00000587259 CASTP20810 708 aaKnown RBP9.11□□□□□ -0.95
VMP1-204ENST00000587259 SLC1A4P43007 532 aa9.11□□□□□ -0.95
VMP1-204ENST00000587259 STAT2P52630 851 aa9.11□□□□□ -0.95
VMP1-204ENST00000587259 CHMP4BP1P59074 171 aa9.11□□□□□ -0.95
VMP1-204ENST00000587259 MRPS5P82675 430 aaKnown RBP9.11□□□□□ -0.95
VMP1-204ENST00000587259 PPARAQ07869 468 aa9.11□□□□□ -0.95
VMP1-204ENST00000587259 SKIV2LQ15477 1246 aaKnown RBP9.11□□□□□ -0.95
VMP1-204ENST00000587259 RAB30Q15771 203 aa9.11□□□□□ -0.95
VMP1-204ENST00000587259 PPP2R2DQ66LE6 453 aa9.11□□□□□ -0.95
VMP1-204ENST00000587259 BLOC1S2Q6QNY1 142 aa9.11□□□□□ -0.95
VMP1-204ENST00000587259 RUFY3Q7L099 469 aa9.11□□□□□ -0.95
VMP1-204ENST00000587259 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.11□□□□□ -0.95
VMP1-204ENST00000587259 TMCO2Q7Z6W1 182 aaPredicted RBP9.11□□□□□ -0.95
VMP1-204ENST00000587259 NEDD1Q8NHV4 660 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms