RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 PPP2R5BQ15173 497 aa20.53■□□□□ 0.88
TPM4-206ENST00000587201 LRIT3Q3SXY7 679 aa20.53■□□□□ 0.88
TPM4-206ENST00000587201 ARHGEF16Q5VV41 709 aa20.53■□□□□ 0.88
TPM4-206ENST00000587201 OR6J1Q8NGC5 347 aa20.53■□□□□ 0.88
TPM4-206ENST00000587201 SCFD2Q8WU76 684 aa20.53■□□□□ 0.88
TPM4-206ENST00000587201 LRCH3Q96II8 777 aa20.53■□□□□ 0.88
TPM4-206ENST00000587201 MAP3K14Q99558 947 aa20.53■□□□□ 0.88
TPM4-206ENST00000587201 PNMA6FA0A0J9YX94 578 aa20.52■□□□□ 0.88
TPM4-206ENST00000587201 OPLAHO14841 1288 aa20.52■□□□□ 0.88
TPM4-206ENST00000587201 KIAA0355O15063 1070 aa20.52■□□□□ 0.88
TPM4-206ENST00000587201 NKRFO15226 690 aaKnown RBP eCLIP20.52■□□□□ 0.883e-8■■■□□ 18
TPM4-206ENST00000587201 KIF5BP33176 963 aa20.52■□□□□ 0.88
TPM4-206ENST00000587201 COL9A3Q14050 684 aaPredicted RBP20.52■□□□□ 0.88
TPM4-206ENST00000587201 TTLL4Q14679 1199 aa20.52■□□□□ 0.88
TPM4-206ENST00000587201 PIBF1Q8WXW3 757 aa20.52■□□□□ 0.88
TPM4-206ENST00000587201 IWS1Q96ST2 819 aa20.52■□□□□ 0.88
TPM4-206ENST00000587201 LRRC2Q9BYS8 371 aa20.52■□□□□ 0.88
TPM4-206ENST00000587201 LTBP2Q14767 1821 aa20.52■□□□□ 0.88
TPM4-206ENST00000587201 TLR3O15455 904 aaKnown RBP20.51■□□□□ 0.87
TPM4-206ENST00000587201 TXNP10599 105 aaKnown RBP20.51■□□□□ 0.87
TPM4-206ENST00000587201 EIF2AK2P19525 551 aaKnown RBP20.51■□□□□ 0.87
TPM4-206ENST00000587201 ITGB8P26012 769 aa20.51■□□□□ 0.87
TPM4-206ENST00000587201 CPT1AP50416 773 aa20.51■□□□□ 0.87
TPM4-206ENST00000587201 HSD17B4P51659 736 aa20.51■□□□□ 0.87
TPM4-206ENST00000587201 STXBP2Q15833 593 aa20.51■□□□□ 0.87
TPM4-206ENST00000587201 MAP3K20Q9NYL2 800 aaKnown RBP20.51■□□□□ 0.87
TPM4-206ENST00000587201 LIFRP42702 1097 aa20.5■□□□□ 0.87
TPM4-206ENST00000587201 GHRHRQ02643 423 aa20.5■□□□□ 0.87
TPM4-206ENST00000587201 ITGA7Q13683 1181 aa20.5■□□□□ 0.87
TPM4-206ENST00000587201 BRDTQ58F21 947 aaPredicted RBP20.5■□□□□ 0.87
TPM4-206ENST00000587201 SEPT14Q6ZU15 432 aa20.5■□□□□ 0.87
TPM4-206ENST00000587201 SAMD3Q8N6K7 520 aa20.5■□□□□ 0.87
TPM4-206ENST00000587201 COPS5Q92905 334 aa20.5■□□□□ 0.87
TPM4-206ENST00000587201 NEK1Q96PY6 1258 aa20.5■□□□□ 0.87
TPM4-206ENST00000587201 PXMP2Q9NR77 195 aa20.5■□□□□ 0.87
TPM4-206ENST00000587201 POLR3EQ9NVU0 708 aa20.5■□□□□ 0.87
TPM4-206ENST00000587201 ARIH2O95376 493 aa20.49■□□□□ 0.87
TPM4-206ENST00000587201 MYL3P08590 195 aa20.49■□□□□ 0.87
TPM4-206ENST00000587201 RXRAP19793 462 aa20.49■□□□□ 0.87
TPM4-206ENST00000587201 HOXA13P31271 388 aaPredicted RBP20.49■□□□□ 0.87
TPM4-206ENST00000587201 GNAQP50148 359 aa20.49■□□□□ 0.87
TPM4-206ENST00000587201 PSMC6P62333 389 aa20.49■□□□□ 0.87
TPM4-206ENST00000587201 FAM126BQ8IXS8 530 aa20.49■□□□□ 0.87
TPM4-206ENST00000587201 RRP36Q96EU6 259 aaKnown RBP20.49■□□□□ 0.87
TPM4-206ENST00000587201 LZTS2Q9BRK4 669 aa20.49■□□□□ 0.87
TPM4-206ENST00000587201 SPZ1Q9BXG8 430 aa20.49■□□□□ 0.87
TPM4-206ENST00000587201 SLC12A7Q9Y666 1083 aa20.49■□□□□ 0.87
TPM4-206ENST00000587201 LAMA3Q16787 3333 aa20.49■□□□□ 0.87
TPM4-206ENST00000587201 BAZ2BQ9UIF8 2168 aaKnown RBP20.48■□□□□ 0.87
TPM4-206ENST00000587201 SZT2Q5T011 3432 aa20.48■□□□□ 0.87
TPM4-206ENST00000587201 GCOM1H8Y6P7 765 aaPredicted RBP20.48■□□□□ 0.87
TPM4-206ENST00000587201 NR3C2P08235 984 aa20.48■□□□□ 0.87
TPM4-206ENST00000587201 POLR2MP0CAP2 368 aa20.48■□□□□ 0.87
TPM4-206ENST00000587201 CALM1P0DP23 149 aa20.48■□□□□ 0.87
TPM4-206ENST00000587201 CALM2P0DP24 149 aa20.48■□□□□ 0.87
TPM4-206ENST00000587201 CALM3P0DP25 149 aa20.48■□□□□ 0.87
TPM4-206ENST00000587201 RAB11FIP4Q86YS3 637 aa20.48■□□□□ 0.87
TPM4-206ENST00000587201 SLC43A3Q8NBI5 491 aa20.48■□□□□ 0.87
TPM4-206ENST00000587201 SEZ6LQ9BYH1 1024 aa20.48■□□□□ 0.87
TPM4-206ENST00000587201 TBX21Q9UL17 535 aa20.48■□□□□ 0.87
TPM4-206ENST00000587201 EIF3JO75822 258 aaKnown RBP20.47■□□□□ 0.87
TPM4-206ENST00000587201 PLEKHA8P1O95397 391 aa20.47■□□□□ 0.87
TPM4-206ENST00000587201 TIMP1P01033 207 aa20.47■□□□□ 0.87
TPM4-206ENST00000587201 SMARCA1P28370 1054 aa20.47■□□□□ 0.87
TPM4-206ENST00000587201 FPGSQ05932 587 aa20.47■□□□□ 0.87
TPM4-206ENST00000587201 SHHQ15465 462 aa20.47■□□□□ 0.87
TPM4-206ENST00000587201 SYNE3Q6ZMZ3 975 aa20.47■□□□□ 0.87
TPM4-206ENST00000587201 RASEFQ8IZ41 740 aa20.47■□□□□ 0.87
TPM4-206ENST00000587201 PDCD2LQ9BRP1 358 aa20.47■□□□□ 0.87
TPM4-206ENST00000587201 SEC63Q9UGP8 760 aaKnown RBP20.47■□□□□ 0.87
TPM4-206ENST00000587201 GRIN2DO15399 1336 aa20.47■□□□□ 0.87
TPM4-206ENST00000587201 MYCLP12524 364 aaPredicted RBP20.46■□□□□ 0.87
TPM4-206ENST00000587201 PURAQ00577 322 aaKnown RBP20.46■□□□□ 0.87
TPM4-206ENST00000587201 KRT32Q14532 448 aa20.46■□□□□ 0.87
TPM4-206ENST00000587201 LY6KQ17RY6 165 aa20.46■□□□□ 0.87
TPM4-206ENST00000587201 TSGA10IPQ3SY00 556 aa20.46■□□□□ 0.87
TPM4-206ENST00000587201 C9orf50Q5SZB4 431 aa20.46■□□□□ 0.87
TPM4-206ENST00000587201 CCDC62Q6P9F0 684 aa20.46■□□□□ 0.87
TPM4-206ENST00000587201 SGMS1Q86VZ5 419 aa20.46■□□□□ 0.87
TPM4-206ENST00000587201 FCHSD1Q86WN1 690 aa20.46■□□□□ 0.87
TPM4-206ENST00000587201 CMTR1Q8N1G2 835 aaKnown RBP20.46■□□□□ 0.87
TPM4-206ENST00000587201 SRBD1Q8N5C6 995 aaKnown RBP20.46■□□□□ 0.87
TPM4-206ENST00000587201 MTG1Q9BT17 334 aaPredicted RBP20.46■□□□□ 0.87
TPM4-206ENST00000587201 PPP1R12CQ9BZL4 782 aa20.46■□□□□ 0.87
TPM4-206ENST00000587201 A6NJR5 290 aa20.45■□□□□ 0.86
TPM4-206ENST00000587201 GH1P01241 217 aa20.45■□□□□ 0.86
TPM4-206ENST00000587201 CD4P01730 458 aa20.45■□□□□ 0.86
TPM4-206ENST00000587201 PGM5Q15124 567 aa20.45■□□□□ 0.86
TPM4-206ENST00000587201 ADCK5Q3MIX3 580 aa20.45■□□□□ 0.86
TPM4-206ENST00000587201 GPR153Q6NV75 609 aa20.45■□□□□ 0.86
TPM4-206ENST00000587201 DHX32Q7L7V1 743 aaKnown RBP20.45■□□□□ 0.86
TPM4-206ENST00000587201 MICU3Q86XE3 530 aa20.45■□□□□ 0.86
TPM4-206ENST00000587201 TCEANC2Q96MN5 208 aa20.45■□□□□ 0.86
TPM4-206ENST00000587201 MRVI1Q9Y6F6 885 aa20.45■□□□□ 0.86
TPM4-206ENST00000587201 KPNA6O60684 536 aa20.44■□□□□ 0.86
TPM4-206ENST00000587201 EXOSC10Q01780 885 aaKnown RBP20.44■□□□□ 0.86
TPM4-206ENST00000587201 MFSD5Q6N075 450 aa20.44■□□□□ 0.86
TPM4-206ENST00000587201 FANCBQ8NB91 859 aa20.44■□□□□ 0.86
TPM4-206ENST00000587201 B4GALT4O60513 344 aa20.43■□□□□ 0.86
TPM4-206ENST00000587201 CCND2P30279 289 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms