RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 NOL8Q76FK4 1167 aaKnown RBP14.32□□□□□ -0.12
ERCC2-207ENST00000586441 FBXO16Q8IX29 292 aaPredicted RBP14.32□□□□□ -0.12
ERCC2-207ENST00000586441 TDHQ8IZJ6 230 aa14.32□□□□□ -0.12
ERCC2-207ENST00000586441 SLC43A3Q8NBI5 491 aa14.32□□□□□ -0.12
ERCC2-207ENST00000586441 CTCFLQ8NI51 663 aaPredicted RBP14.32□□□□□ -0.12
ERCC2-207ENST00000586441 LENG1Q96BZ8 264 aaPredicted RBP14.32□□□□□ -0.12
ERCC2-207ENST00000586441 PURBQ96QR8 312 aaKnown RBP14.32□□□□□ -0.12
ERCC2-207ENST00000586441 SPZ1Q9BXG8 430 aa14.32□□□□□ -0.12
ERCC2-207ENST00000586441 WDR11Q9BZH6 1224 aa14.32□□□□□ -0.12
ERCC2-207ENST00000586441 UBE2OQ9C0C9 1292 aaKnown RBP14.32□□□□□ -0.12
ERCC2-207ENST00000586441 PDLIM7Q9NR12 457 aa14.32□□□□□ -0.12
ERCC2-207ENST00000586441 PDGFCQ9NRA1 345 aa14.32□□□□□ -0.12
ERCC2-207ENST00000586441 LRRC37A2A6NM11 1700 aa14.32□□□□□ -0.12
ERCC2-207ENST00000586441 A0A0U1RQG5 324 aaPredicted RBP14.31□□□□□ -0.12
ERCC2-207ENST00000586441 MYADML2A6NDP7 307 aa14.31□□□□□ -0.12
ERCC2-207ENST00000586441 ARVCFO00192 962 aa14.31□□□□□ -0.12
ERCC2-207ENST00000586441 SH2B2O14492 632 aaPredicted RBP14.31□□□□□ -0.12
ERCC2-207ENST00000586441 DYNC1LI2O43237 492 aaPredicted RBP14.31□□□□□ -0.12
ERCC2-207ENST00000586441 CYTH3O43739 400 aa14.31□□□□□ -0.12
ERCC2-207ENST00000586441 CLTBP09497 229 aa14.31□□□□□ -0.12
ERCC2-207ENST00000586441 ANAPC15P60006 121 aa14.31□□□□□ -0.12
ERCC2-207ENST00000586441 NBR1Q14596 966 aa14.31□□□□□ -0.12
ERCC2-207ENST00000586441 STXBP2Q15833 593 aa14.31□□□□□ -0.12
ERCC2-207ENST00000586441 BRDTQ58F21 947 aaPredicted RBP14.31□□□□□ -0.12
ERCC2-207ENST00000586441 EEPD1Q7L9B9 569 aa14.31□□□□□ -0.12
ERCC2-207ENST00000586441 CHST3Q7LGC8 479 aa14.31□□□□□ -0.12
ERCC2-207ENST00000586441 SGMS1Q86VZ5 419 aa14.31□□□□□ -0.12
ERCC2-207ENST00000586441 TEX2Q8IWB9 1127 aa14.31□□□□□ -0.12
ERCC2-207ENST00000586441 ZNF654Q8IZM8 581 aa14.31□□□□□ -0.12
ERCC2-207ENST00000586441 NEK1Q96PY6 1258 aa14.31□□□□□ -0.12
ERCC2-207ENST00000586441 RMDN3Q96TC7 470 aa14.31□□□□□ -0.12
ERCC2-207ENST00000586441 SENP2Q9HC62 589 aa14.31□□□□□ -0.12
ERCC2-207ENST00000586441 CCDC69A6NI79 296 aa14.3□□□□□ -0.12
ERCC2-207ENST00000586441 K7ELQ4 463 aaPredicted RBP14.3□□□□□ -0.12
ERCC2-207ENST00000586441 OPLAHO14841 1288 aa14.3□□□□□ -0.12
ERCC2-207ENST00000586441 ST18O60284 1047 aa14.3□□□□□ -0.12
ERCC2-207ENST00000586441 PPP1R11O60927 126 aaPredicted RBP14.3□□□□□ -0.12
ERCC2-207ENST00000586441 EIF3JO75822 258 aaKnown RBP14.3□□□□□ -0.12
ERCC2-207ENST00000586441 CPT1AP50416 773 aa14.3□□□□□ -0.12
ERCC2-207ENST00000586441 FAAP100Q0VG06 881 aa14.3□□□□□ -0.12
ERCC2-207ENST00000586441 TTLL4Q14679 1199 aa14.3□□□□□ -0.12
ERCC2-207ENST00000586441 TBC1D5Q92609 795 aa14.3□□□□□ -0.12
ERCC2-207ENST00000586441 KCNB2Q92953 911 aa14.3□□□□□ -0.12
ERCC2-207ENST00000586441 TAAR1Q96RJ0 339 aa14.3□□□□□ -0.12
ERCC2-207ENST00000586441 POLR3EQ9NVU0 708 aa14.3□□□□□ -0.12
ERCC2-207ENST00000586441 KIAA1217Q5T5P2 1943 aa14.29□□□□□ -0.12
ERCC2-207ENST00000586441 TRIM43BA6NCK2 446 aa14.29□□□□□ -0.12
ERCC2-207ENST00000586441 A6NJR5 290 aa14.29□□□□□ -0.12
ERCC2-207ENST00000586441 CFBP00751 764 aa14.29□□□□□ -0.12
ERCC2-207ENST00000586441 RCAN1P53805 252 aa14.29□□□□□ -0.12
ERCC2-207ENST00000586441 EXOSC10Q01780 885 aaKnown RBP14.29□□□□□ -0.12
ERCC2-207ENST00000586441 PPP2R5BQ15173 497 aa14.29□□□□□ -0.12
ERCC2-207ENST00000586441 SLC35G1Q2M3R5 365 aa14.29□□□□□ -0.12
ERCC2-207ENST00000586441 CCDC62Q6P9F0 684 aa14.29□□□□□ -0.12
ERCC2-207ENST00000586441 KCNV1Q6PIU1 500 aa14.29□□□□□ -0.12
ERCC2-207ENST00000586441 DHX32Q7L7V1 743 aaKnown RBP14.29□□□□□ -0.12
ERCC2-207ENST00000586441 VTI1AQ96AJ9 217 aa14.29□□□□□ -0.12
ERCC2-207ENST00000586441 TRIM43Q96BQ3 446 aaPredicted RBP14.29□□□□□ -0.12
ERCC2-207ENST00000586441 RRP36Q96EU6 259 aaKnown RBP14.29□□□□□ -0.12
ERCC2-207ENST00000586441 PIGSQ96S52 555 aa14.29□□□□□ -0.12
ERCC2-207ENST00000586441 PXMP2Q9NR77 195 aa14.29□□□□□ -0.12
ERCC2-207ENST00000586441 CHMP5Q9NZZ3 219 aa14.29□□□□□ -0.12
ERCC2-207ENST00000586441 COL20A1Q9P218 1284 aa14.29□□□□□ -0.12
ERCC2-207ENST00000586441 CIZ1Q9ULV3 898 aaPredicted RBP14.29□□□□□ -0.12
ERCC2-207ENST00000586441 SLC12A7Q9Y666 1083 aa14.29□□□□□ -0.12
ERCC2-207ENST00000586441 LTBP2Q14767 1821 aa14.29□□□□□ -0.12
ERCC2-207ENST00000586441 TLR3O15455 904 aaKnown RBP14.28□□□□□ -0.12
ERCC2-207ENST00000586441 NR3C2P08235 984 aa14.28□□□□□ -0.12
ERCC2-207ENST00000586441 TXNP10599 105 aaKnown RBP14.28□□□□□ -0.12
ERCC2-207ENST00000586441 TGFB3P10600 412 aa14.28□□□□□ -0.12
ERCC2-207ENST00000586441 MDM2Q00987 491 aaPredicted RBP14.28□□□□□ -0.12
ERCC2-207ENST00000586441 ITGA7Q13683 1181 aa14.28□□□□□ -0.12
ERCC2-207ENST00000586441 ARHGEF16Q5VV41 709 aa14.28□□□□□ -0.12
ERCC2-207ENST00000586441 SYNE3Q6ZMZ3 975 aa14.28□□□□□ -0.12
ERCC2-207ENST00000586441 NFXL1Q6ZNB6 911 aa14.28□□□□□ -0.12
ERCC2-207ENST00000586441 FAM126BQ8IXS8 530 aa14.28□□□□□ -0.12
ERCC2-207ENST00000586441 FBXL16Q8N461 479 aa14.28□□□□□ -0.12
ERCC2-207ENST00000586441 FANCBQ8NB91 859 aa14.28□□□□□ -0.12
ERCC2-207ENST00000586441 IL17RAQ96F46 866 aa14.28□□□□□ -0.12
ERCC2-207ENST00000586441 SLKQ9H2G2 1235 aaPredicted RBP14.28□□□□□ -0.12
ERCC2-207ENST00000586441 TMEM39AQ9NV64 488 aa14.28□□□□□ -0.12
ERCC2-207ENST00000586441 GCOM1H8Y6P7 765 aaPredicted RBP14.27□□□□□ -0.13
ERCC2-207ENST00000586441 PIK3CDO00329 1044 aa14.27□□□□□ -0.13
ERCC2-207ENST00000586441 PQBP1O60828 265 aaKnown RBP14.27□□□□□ -0.13
ERCC2-207ENST00000586441 STAM2O75886 525 aa14.27□□□□□ -0.13
ERCC2-207ENST00000586441 TIMP1P01033 207 aa14.27□□□□□ -0.13
ERCC2-207ENST00000586441 CD4P01730 458 aa14.27□□□□□ -0.13
ERCC2-207ENST00000586441 POLR2MP0CAP2 368 aa14.27□□□□□ -0.13
ERCC2-207ENST00000586441 RAG1P15918 1043 aa14.27□□□□□ -0.13
ERCC2-207ENST00000586441 MCM2P49736 904 aa14.27□□□□□ -0.13
ERCC2-207ENST00000586441 IRX5P78411 483 aaPredicted RBP14.27□□□□□ -0.13
ERCC2-207ENST00000586441 BEX3Q00994 111 aa14.27□□□□□ -0.13
ERCC2-207ENST00000586441 NFKBIBQ15653 356 aa14.27□□□□□ -0.13
ERCC2-207ENST00000586441 CXCL17Q6UXB2 119 aa14.27□□□□□ -0.13
ERCC2-207ENST00000586441 SH3RF1Q7Z6J0 888 aa14.27□□□□□ -0.13
ERCC2-207ENST00000586441 VSIG10LQ86VR7 867 aa14.27□□□□□ -0.13
ERCC2-207ENST00000586441 HOMER1Q86YM7 354 aa14.27□□□□□ -0.13
ERCC2-207ENST00000586441 EMID1Q96A84 441 aaPredicted RBP14.27□□□□□ -0.13
ERCC2-207ENST00000586441 PDCD2LQ9BRP1 358 aa14.27□□□□□ -0.13
ERCC2-207ENST00000586441 GPHNQ9NQX3 736 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms