RNA–Protein interactions for RNA: ENST00000585735.1

GHDC-205, Transcript of GH3 domain containing, humanhuman

TSL 2

Gene GHDC, Length 940 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-205ENST00000585735 PCDHB6Q9Y5E3 794 aa23.45■■□□□ 1.34
GHDC-205ENST00000585735 TRAF1Q13077 416 aa23.44■■□□□ 1.34
GHDC-205ENST00000585735 SPP2Q13103 211 aa23.44■■□□□ 1.34
GHDC-205ENST00000585735 FBXO11Q86XK2 927 aa23.44■■□□□ 1.34
GHDC-205ENST00000585735 TDHQ8IZJ6 230 aa23.44■■□□□ 1.34
GHDC-205ENST00000585735 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.44■■□□□ 1.34
GHDC-205ENST00000585735 PCDHA1Q9Y5I3 950 aa23.44■■□□□ 1.34
GHDC-205ENST00000585735 MORC2Q9Y6X9 1032 aaPredicted RBP23.44■■□□□ 1.34
GHDC-205ENST00000585735 LIG1P18858 919 aa23.43■■□□□ 1.34
GHDC-205ENST00000585735 MRPL12P52815 198 aaKnown RBP23.43■■□□□ 1.34
GHDC-205ENST00000585735 SNAP25P60880 206 aa23.43■■□□□ 1.34
GHDC-205ENST00000585735 MTMR2Q13614 643 aa23.43■■□□□ 1.34
GHDC-205ENST00000585735 GSE1Q14687 1217 aa23.43■■□□□ 1.34
GHDC-205ENST00000585735 CCAR1Q8IX12 1150 aaKnown RBP23.43■■□□□ 1.34
GHDC-205ENST00000585735 REXO1Q8N1G1 1221 aaKnown RBP23.43■■□□□ 1.34
GHDC-205ENST00000585735 ZHX2Q9Y6X8 837 aa23.43■■□□□ 1.34
GHDC-205ENST00000585735 PHIPQ8WWQ0 1821 aa23.43■■□□□ 1.34
GHDC-205ENST00000585735 CXCL11O14625 94 aa23.42■■□□□ 1.34
GHDC-205ENST00000585735 SYN1P17600 705 aa23.42■■□□□ 1.34
GHDC-205ENST00000585735 MARCKSP29966 332 aaPredicted RBP23.42■■□□□ 1.34
GHDC-205ENST00000585735 MAGEA10P43363 369 aaPredicted RBP23.42■■□□□ 1.34
GHDC-205ENST00000585735 BACE1P56817 501 aa23.42■■□□□ 1.34
GHDC-205ENST00000585735 CCDC183Q5T5S1 534 aa23.42■■□□□ 1.34
GHDC-205ENST00000585735 CUL5Q93034 780 aa23.42■■□□□ 1.34
GHDC-205ENST00000585735 KIFC2Q96AC6 838 aa23.42■■□□□ 1.34
GHDC-205ENST00000585735 RANBP17Q9H2T7 1088 aaKnown RBP23.42■■□□□ 1.34
GHDC-205ENST00000585735 EMILIN3Q9NT22 766 aa23.42■■□□□ 1.34
GHDC-205ENST00000585735 C19orf81C9J6K1 198 aa23.41■■□□□ 1.34
GHDC-205ENST00000585735 CUTAO60888 179 aa23.41■■□□□ 1.34
GHDC-205ENST00000585735 NONOQ15233 471 aaKnown RBP eCLIP23.41■■□□□ 1.34
GHDC-205ENST00000585735 ZSCAN23Q3MJ62 389 aa23.41■■□□□ 1.34
GHDC-205ENST00000585735 AXDND1Q5T1B0 1012 aaPredicted RBP23.41■■□□□ 1.34
GHDC-205ENST00000585735 FSIP1Q8NA03 581 aa23.41■■□□□ 1.34
GHDC-205ENST00000585735 ANKLE1Q8NAG6 615 aa23.41■■□□□ 1.34
GHDC-205ENST00000585735 MRPS27Q92552 414 aaKnown RBP23.41■■□□□ 1.34
GHDC-205ENST00000585735 PSTPIP2Q9H939 334 aa23.41■■□□□ 1.34
GHDC-205ENST00000585735 VCANP13611 3396 aa23.4■■□□□ 1.34
GHDC-205ENST00000585735 TNPO2O14787 897 aaKnown RBP23.4■■□□□ 1.34
GHDC-205ENST00000585735 ZNF174Q15697 407 aa23.4■■□□□ 1.34
GHDC-205ENST00000585735 JAKMIP3Q5VZ66 844 aa23.4■■□□□ 1.34
GHDC-205ENST00000585735 CCDC73Q6ZRK6 1079 aa23.4■■□□□ 1.34
GHDC-205ENST00000585735 KRI1Q8N9T8 703 aaKnown RBP23.4■■□□□ 1.34
GHDC-205ENST00000585735 C12orf42Q96LP6 360 aa23.4■■□□□ 1.34
GHDC-205ENST00000585735 SLF1Q9BQI6 1058 aa23.4■■□□□ 1.34
GHDC-205ENST00000585735 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.4■■□□□ 1.34
GHDC-205ENST00000585735 VCAM1P19320 739 aa23.39■■□□□ 1.33
GHDC-205ENST00000585735 INF2Q27J81 1249 aa23.39■■□□□ 1.33
GHDC-205ENST00000585735 DDX19AQ9NUU7 478 aaKnown RBP23.39■■□□□ 1.33
GHDC-205ENST00000585735 FBXO28Q9NVF7 368 aa23.39■■□□□ 1.33
GHDC-205ENST00000585735 TMEM260Q9NX78 707 aa23.39■■□□□ 1.33
GHDC-205ENST00000585735 WNT7AO00755 349 aa23.38■■□□□ 1.33
GHDC-205ENST00000585735 PTPREP23469 700 aa23.38■■□□□ 1.33
GHDC-205ENST00000585735 CMA1P23946 247 aa23.38■■□□□ 1.33
GHDC-205ENST00000585735 PRPF38AQ8NAV1 312 aaKnown RBP23.38■■□□□ 1.33
GHDC-205ENST00000585735 GOLPH3LQ9H4A5 285 aa23.38■■□□□ 1.33
GHDC-205ENST00000585735 FBXO2Q9UK22 296 aaPredicted RBP23.38■■□□□ 1.33
GHDC-205ENST00000585735 AFG3L2Q9Y4W6 797 aa23.38■■□□□ 1.33
GHDC-205ENST00000585735 A0A0G2JLL6 359 aaPredicted RBP23.37■■□□□ 1.33
GHDC-205ENST00000585735 LETM1O95202 739 aaPredicted RBP23.37■■□□□ 1.33
GHDC-205ENST00000585735 CLK2P49760 499 aaKnown RBP23.37■■□□□ 1.33
GHDC-205ENST00000585735 ZNF445P59923 1031 aa23.37■■□□□ 1.33
GHDC-205ENST00000585735 USH1GQ495M9 461 aa23.37■■□□□ 1.33
GHDC-205ENST00000585735 CCDC174Q6PII3 467 aa23.37■■□□□ 1.33
GHDC-205ENST00000585735 FASTKD5Q7L8L6 764 aaKnown RBP23.37■■□□□ 1.33
GHDC-205ENST00000585735 PRRT2Q7Z6L0 340 aaPredicted RBP23.37■■□□□ 1.33
GHDC-205ENST00000585735 TEX2Q8IWB9 1127 aa23.37■■□□□ 1.33
GHDC-205ENST00000585735 TANGO6Q9C0B7 1094 aa23.37■■□□□ 1.33
GHDC-205ENST00000585735 UBE2OQ9C0C9 1292 aaKnown RBP23.37■■□□□ 1.33
GHDC-205ENST00000585735 RPAP3Q9H6T3 665 aaPredicted RBP23.37■■□□□ 1.33
GHDC-205ENST00000585735 DACT1Q9NYF0 836 aa23.37■■□□□ 1.33
GHDC-205ENST00000585735 TMOD4Q9NZQ9 345 aa23.37■■□□□ 1.33
GHDC-205ENST00000585735 SRPRBQ9Y5M8 271 aaKnown RBP23.37■■□□□ 1.33
GHDC-205ENST00000585735 PLXNB2O15031 1838 aa23.36■■□□□ 1.33
GHDC-205ENST00000585735 ATP2C1P98194 919 aaPredicted RBP23.36■■□□□ 1.33
GHDC-205ENST00000585735 FAM160A1Q05DH4 1040 aa23.36■■□□□ 1.33
GHDC-205ENST00000585735 UBE2SQ16763 222 aa23.36■■□□□ 1.33
GHDC-205ENST00000585735 MCTP2Q6DN12 878 aa23.36■■□□□ 1.33
GHDC-205ENST00000585735 ZNF579Q8NAF0 562 aaKnown RBP23.36■■□□□ 1.33
GHDC-205ENST00000585735 FERMT2Q96AC1 680 aa23.36■■□□□ 1.33
GHDC-205ENST00000585735 GUCD1Q96NT3 240 aa23.36■■□□□ 1.33
GHDC-205ENST00000585735 SLC45A1Q9Y2W3 748 aa23.36■■□□□ 1.33
GHDC-205ENST00000585735 RPTORQ8N122 1335 aa23.35■■□□□ 1.33
GHDC-205ENST00000585735 POTEB2H3BUK9 544 aa23.35■■□□□ 1.33
GHDC-205ENST00000585735 NR1I2O75469 434 aa23.35■■□□□ 1.33
GHDC-205ENST00000585735 MCM7P33993 719 aa23.35■■□□□ 1.33
GHDC-205ENST00000585735 HMGCS2P54868 508 aa23.35■■□□□ 1.33
GHDC-205ENST00000585735 PTGDRQ13258 359 aa23.35■■□□□ 1.33
GHDC-205ENST00000585735 SH3D19Q5HYK7 790 aa23.35■■□□□ 1.33
GHDC-205ENST00000585735 SAMD1Q6SPF0 538 aaPredicted RBP23.35■■□□□ 1.33
GHDC-205ENST00000585735 NEK8Q86SG6 692 aa23.35■■□□□ 1.33
GHDC-205ENST00000585735 ENGASEQ8NFI3 743 aa23.35■■□□□ 1.33
GHDC-205ENST00000585735 TBCKQ8TEA7 893 aa23.35■■□□□ 1.33
GHDC-205ENST00000585735 CLIC6Q96NY7 704 aa23.35■■□□□ 1.33
GHDC-205ENST00000585735 NUP62CLQ9H1M0 184 aa23.35■■□□□ 1.33
GHDC-205ENST00000585735 CLSTN2Q9H4D0 955 aa23.35■■□□□ 1.33
GHDC-205ENST00000585735 PPP1R9AQ9ULJ8 1098 aa23.35■■□□□ 1.33
GHDC-205ENST00000585735 SPTBN5Q9NRC6 3674 aaKnown RBP23.35■■□□□ 1.33
GHDC-205ENST00000585735 ABCB11O95342 1321 aa23.34■■□□□ 1.33
GHDC-205ENST00000585735 FAM237AA0A1B0GTK4 181 aa23.34■■□□□ 1.33
GHDC-205ENST00000585735 FLOT1O75955 427 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms