RNA–Protein interactions for RNA: ENST00000584911.1

LINC00473-205, long intergenic non-protein coding RNA 473, human

TSL 1 (best) BASIC

Gene LINC00473, Length 2,212 nt, Biotype lincRNA, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00473-205	ENST00000584911	RRAGB	Q5VZM2	374 aa		13.26	□□□□□ -0.29
LINC00473-205	ENST00000584911	SLC51A	Q86UW1	340 aa		13.26	□□□□□ -0.29
LINC00473-205	ENST00000584911	CCDC50	Q8IVM0	306 aa		13.26	□□□□□ -0.29
LINC00473-205	ENST00000584911	CCDC170	Q8IYT3	715 aa		13.26	□□□□□ -0.29
LINC00473-205	ENST00000584911	TRMT112	Q9UI30	125 aa	Known RBP	13.26	□□□□□ -0.29
LINC00473-205	ENST00000584911	MDH1	P40925	334 aa	Known RBP	13.25	□□□□□ -0.29
LINC00473-205	ENST00000584911	PPARA	Q07869	468 aa		13.25	□□□□□ -0.29
LINC00473-205	ENST00000584911	IFT88	Q13099	833 aa		13.25	□□□□□ -0.29
LINC00473-205	ENST00000584911	KCTD16	Q68DU8	428 aa		13.25	□□□□□ -0.29
LINC00473-205	ENST00000584911	NFXL1	Q6ZNB6	911 aa		13.25	□□□□□ -0.29
LINC00473-205	ENST00000584911	PARP9	Q8IXQ6	854 aa		13.25	□□□□□ -0.29
LINC00473-205	ENST00000584911	MREG	Q8N565	214 aa		13.25	□□□□□ -0.29
LINC00473-205	ENST00000584911	OXER1	Q8TDS5	423 aa		13.25	□□□□□ -0.29
LINC00473-205	ENST00000584911	NELFB	Q8WX92	580 aa		13.25	□□□□□ -0.29
LINC00473-205	ENST00000584911	TTYH3	Q9C0H2	523 aa		13.25	□□□□□ -0.29
LINC00473-205	ENST00000584911	DUSP10	Q9Y6W6	482 aa		13.25	□□□□□ -0.29
LINC00473-205	ENST00000584911	KRT14	P02533	472 aa		13.25	□□□□□ -0.29
LINC00473-205	ENST00000584911	PARP1	P09874	1014 aa	Known RBP	13.25	□□□□□ -0.29
LINC00473-205	ENST00000584911	NR1D1	P20393	614 aa		13.25	□□□□□ -0.29
LINC00473-205	ENST00000584911	PAX7	P23759	505 aa		13.25	□□□□□ -0.29
LINC00473-205	ENST00000584911	HTRA3	P83110	453 aa		13.25	□□□□□ -0.29
LINC00473-205	ENST00000584911	SLC7A5	Q01650	507 aa		13.25	□□□□□ -0.29
LINC00473-205	ENST00000584911	ATP2B2	Q01814	1243 aa		13.25	□□□□□ -0.29
LINC00473-205	ENST00000584911	TRIM28	Q13263	835 aa	Known RBP	13.25	□□□□□ -0.29
LINC00473-205	ENST00000584911	SCARF1	Q14162	830 aa		13.25	□□□□□ -0.29
LINC00473-205	ENST00000584911	CYB5D1	Q6P9G0	228 aa		13.25	□□□□□ -0.29
LINC00473-205	ENST00000584911	FUK	Q8N0W3	1084 aa		13.25	□□□□□ -0.29
LINC00473-205	ENST00000584911	PIK3R5	Q8WYR1	880 aa		13.25	□□□□□ -0.29
LINC00473-205	ENST00000584911	ATP6V0A2	Q9Y487	856 aa		13.25	□□□□□ -0.29
LINC00473-205	ENST00000584911	PDS5A	Q29RF7	1337 aa	Known RBP	13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911	IQCA1L	A6NCM1	817 aa		13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911		H7C1D1	291 aa		13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911	VAV2	P52735	878 aa		13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911	SEC24C	P53992	1094 aa		13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911	TSR1	Q2NL82	804 aa	Known RBP	13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911	TMEM67	Q5HYA8	995 aa		13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911	EGFL6	Q8IUX8	553 aa		13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911	FMNL3	Q8IVF7	1028 aa		13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911	ATP6V0A4	Q9HBG4	840 aa		13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911	CABP5	Q9NP86	173 aa		13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911	SLC12A7	Q9Y666	1083 aa		13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911	TRIM75P	A6NK02	468 aa		13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911	BBOX1	O75936	387 aa		13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911	PDHB	P11177	359 aa		13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911	ADORA1	P30542	326 aa		13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911	ZAP70	P43403	619 aa		13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911	PPP4R3A	Q6IN85	833 aa		13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911	C3orf20	Q8ND61	904 aa		13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911	TRIM58	Q8NG06	486 aa		13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911	FERMT2	Q96AC1	680 aa		13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911	SGSM3	Q96HU1	749 aa		13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911	ZNF594	Q96JF6	807 aa	Predicted RBP	13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911	TSGA10	Q9BZW7	698 aa		13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911	GDF3	Q9NR23	364 aa		13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911	VPS54	Q9P1Q0	977 aa		13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911	TPX2	Q9ULW0	747 aa	Known RBP	13.24	□□□□□ -0.29
LINC00473-205	ENST00000584911	RASSF10	A6NK89	507 aa		13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	DEXI	O95424	95 aa		13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	CDR1	P51861	262 aa		13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	MRPS25	P82663	173 aa	Known RBP	13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	CDK17	Q00537	523 aa		13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	ITGB3BP	Q13352	177 aa	Predicted RBP	13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	GLE1	Q53GS7	698 aa	Known RBP	13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	TRIM22	Q8IYM9	498 aa		13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	JDP2	Q8WYK2	163 aa		13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	CCDC43	Q96MW1	224 aa	Known RBP	13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	MTR	Q99707	1265 aa		13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	PUS3	Q9BZE2	481 aa	Known RBP	13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	GOLGA6L7	A0A1B0GV03	622 aa		13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	MACROD2	A1Z1Q3	448 aa		13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	ZNF263	O14978	683 aa		13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	GTPBP6	O43824	516 aa	Predicted RBP	13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	POTEI	P0CG38	1075 aa		13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	POTEJ	P0CG39	1038 aa		13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	TCP1	P17987	556 aa	Known RBP	13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	CTDSPL2	Q05D32	466 aa		13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	CFAP58	Q5T655	872 aa		13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	CHADL	Q6NUI6	762 aa		13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	PDXDC2P	Q6P474	469 aa		13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	SP8	Q8IXZ3	490 aa		13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	GPC2	Q8N158	579 aa		13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	KLRG1	Q96E93	195 aa		13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	CYFIP2	Q96F07	1278 aa		13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	ATP6V1G3	Q96LB4	118 aa		13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	CCDC114	Q96M63	670 aa		13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	OSBPL9	Q96SU4	736 aa		13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	OSBPL7	Q9BZF2	842 aa		13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	VPS33B	Q9H267	617 aa		13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	BLZF1	Q9H2G9	400 aa		13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	CENPH	Q9H3R5	247 aa		13.23	□□□□□ -0.29
LINC00473-205	ENST00000584911	FAM205C	A6NFA0	338 aa		13.22	□□□□□ -0.29
LINC00473-205	ENST00000584911	HMGB1P1	B2RPK0	211 aa	Predicted RBP	13.22	□□□□□ -0.29
LINC00473-205	ENST00000584911	NEBL	O76041	1014 aa		13.22	□□□□□ -0.29
LINC00473-205	ENST00000584911	EEF1G	P26641	437 aa	Known RBP	13.22	□□□□□ -0.29
LINC00473-205	ENST00000584911	ADD2	P35612	726 aa		13.22	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms