RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 LCE3BQ5TA77 95 aa2.56□□□□□ -2
SMCHD1-211ENST00000584897 FBXW10Q5XX13 1052 aa2.56□□□□□ -2
SMCHD1-211ENST00000584897 TTLL7Q6ZT98 887 aa2.56□□□□□ -2
SMCHD1-211ENST00000584897 PRPF38AQ8NAV1 312 aaKnown RBP2.56□□□□□ -2
SMCHD1-211ENST00000584897 ZCRB1Q8TBF4 217 aaKnown RBP2.56□□□□□ -2
SMCHD1-211ENST00000584897 JARID2Q92833 1246 aaPredicted RBP2.56□□□□□ -2
SMCHD1-211ENST00000584897 CRELD1Q96HD1 420 aa2.56□□□□□ -2
SMCHD1-211ENST00000584897 C19orf44Q9H6X5 657 aa2.56□□□□□ -2
SMCHD1-211ENST00000584897 WWC3Q9ULE0 1092 aa2.56□□□□□ -2
SMCHD1-211ENST00000584897 FAN1Q9Y2M0 1017 aa2.56□□□□□ -2
SMCHD1-211ENST00000584897 BMP6P22004 513 aa2.56□□□□□ -2
SMCHD1-211ENST00000584897 R3HDM1Q15032 1099 aaKnown RBP2.56□□□□□ -2
SMCHD1-211ENST00000584897 ADAMTSL4Q6UY14 1074 aa2.56□□□□□ -2
SMCHD1-211ENST00000584897 ATG14Q6ZNE5 492 aa2.56□□□□□ -2
SMCHD1-211ENST00000584897 C3orf58Q8NDZ4 430 aa2.56□□□□□ -2
SMCHD1-211ENST00000584897 ANKRD50Q9ULJ7 1429 aa2.56□□□□□ -2
SMCHD1-211ENST00000584897 KIF15Q9NS87 1388 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 CLEC3AO75596 197 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 FGRP09769 529 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 NFE2L2Q16236 605 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 SPATS1Q496A3 300 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 NOP9Q86U38 636 aaKnown RBP2.55□□□□□ -2
SMCHD1-211ENST00000584897 MCATQ8IVS2 390 aaKnown RBP2.55□□□□□ -2
SMCHD1-211ENST00000584897 DIRC2Q96SL1 478 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 TGIF2Q9GZN2 237 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 USP40Q9NVE5 1235 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 PIK3C2AO00443 1686 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 ADAMTS13Q76LX8 1427 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 A0A1W2PQ45 241 aaPredicted RBP2.55□□□□□ -2
SMCHD1-211ENST00000584897 A0A1W2PQY0 241 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 B8ZZF3 427 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 ZBTB7AO95365 584 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 MED14OSP0DP75 135 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 ZSCAN22P10073 491 aaPredicted RBP2.55□□□□□ -2
SMCHD1-211ENST00000584897 JAG1P78504 1218 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 POU4F1Q01851 419 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 KCNA10Q16322 511 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 PRAMEF13Q5VWM6 474 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 CDH24Q86UP0 819 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 PDZD3Q86UT5 571 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 UNC5CLQ8IV45 518 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 SIGLEC10Q96LC7 697 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 GPR20Q99678 358 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.55□□□□□ -2
SMCHD1-211ENST00000584897 KIF13BQ9NQT8 1826 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 PLEKHG2Q9H7P9 1386 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 NPIPB6E9PJ23 425 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 GJA8P48165 433 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 CTSWP56202 376 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 IFRD2Q12894 506 aaPredicted RBP2.55□□□□□ -2
SMCHD1-211ENST00000584897 NBPF9Q3BBW0 867 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 HS1BP3Q53T59 392 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 KRT27Q7Z3Y8 459 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 PLPPR2Q96GM1 343 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 ACBD3Q9H3P7 528 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 DDX41Q9UJV9 622 aaKnown RBP2.55□□□□□ -2
SMCHD1-211ENST00000584897 TBX22Q9Y458 520 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 C1orf167Q5SNV9 1468 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 KIF1BO60333 1816 aa2.55□□□□□ -2
SMCHD1-211ENST00000584897 ZC3H12DA2A288 527 aaKnown RBP2.54□□□□□ -2
SMCHD1-211ENST00000584897 POLD1P28340 1107 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 HK2P52789 917 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 SLC9A5Q14940 896 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 CHRNA2Q15822 529 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 ZNF827Q17R98 1081 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 NOL9Q5SY16 702 aaKnown RBP2.54□□□□□ -2
SMCHD1-211ENST00000584897 ZNF648Q5T619 568 aaPredicted RBP2.54□□□□□ -2
SMCHD1-211ENST00000584897 SPACA3Q8IXA5 215 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 NKD1Q969G9 470 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 PCDHB12Q9Y5F1 795 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 EID1Q9Y6B2 187 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 ALS2Q96Q42 1657 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 TRPM3Q9HCF6 1732 aaPredicted RBP2.54□□□□□ -2
SMCHD1-211ENST00000584897 LEFTY1O75610 366 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 ITGA4P13612 1032 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 KIAA2012Q0VF49 1180 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 FAAP100Q0VG06 881 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 BORAQ6PGQ7 559 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 RASGRP4Q8TDF6 673 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 TMEM74Q96NL1 305 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 OSBPL7Q9BZF2 842 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 SEMA3GQ9NS98 782 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 YBX2Q9Y2T7 364 aaKnown RBP2.54□□□□□ -2
SMCHD1-211ENST00000584897 KIAA1551Q9HCM1 1747 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 MAFKO60675 156 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 POU3F3P20264 500 aaPredicted RBP2.54□□□□□ -2
SMCHD1-211ENST00000584897 RPL10P27635 214 aaKnown RBP2.54□□□□□ -2
SMCHD1-211ENST00000584897 NFIXQ14938 502 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 NBPF8Q3BBV2 869 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 AXDND1Q5T1B0 1012 aaPredicted RBP2.54□□□□□ -2
SMCHD1-211ENST00000584897 GIMAP6Q6P9H5 292 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 CEP89Q96ST8 783 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 LNPKQ9C0E8 428 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 KCTD3Q9Y597 815 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 PCDHGC5Q9Y5F6 944 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 TUBGCP6Q96RT7 1819 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 USP31Q70CQ4 1352 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 PTPRUQ92729 1446 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 FMN2Q9NZ56 1722 aa2.54□□□□□ -2
SMCHD1-211ENST00000584897 A0A087WZG4 1122 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms