RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 VAT1LQ9HCJ6 419 aa20.75■□□□□ 0.91
ERBB2-221ENST00000584888 GRIN2DO15399 1336 aa20.75■□□□□ 0.91
ERBB2-221ENST00000584888 ABCB11O95342 1321 aa20.75■□□□□ 0.91
ERBB2-221ENST00000584888 LIFRP42702 1097 aa20.74■□□□□ 0.91
ERBB2-221ENST00000584888 RPS6P62753 249 aaKnown RBP20.74■□□□□ 0.91
ERBB2-221ENST00000584888 ITGA7Q13683 1181 aa20.74■□□□□ 0.91
ERBB2-221ENST00000584888 USH1GQ495M9 461 aa20.74■□□□□ 0.91
ERBB2-221ENST00000584888 DUSP28Q4G0W2 176 aa20.74■□□□□ 0.91
ERBB2-221ENST00000584888 RNF20Q5VTR2 975 aa20.74■□□□□ 0.91
ERBB2-221ENST00000584888 CATIPQ7Z7H3 387 aa20.74■□□□□ 0.91
ERBB2-221ENST00000584888 FBXO11Q86XK2 927 aa20.74■□□□□ 0.91
ERBB2-221ENST00000584888 TMTC2Q8N394 836 aa20.74■□□□□ 0.91
ERBB2-221ENST00000584888 TBC1D5Q92609 795 aa20.74■□□□□ 0.91
ERBB2-221ENST00000584888 WDR11Q9BZH6 1224 aa20.74■□□□□ 0.91
ERBB2-221ENST00000584888 RBM47A0AV96 593 aaKnown RBP20.73■□□□□ 0.91
ERBB2-221ENST00000584888 CYTH3O43739 400 aa20.73■□□□□ 0.91
ERBB2-221ENST00000584888 PPP1R11O60927 126 aaPredicted RBP20.73■□□□□ 0.91
ERBB2-221ENST00000584888 EXOSC10Q01780 885 aaKnown RBP20.73■□□□□ 0.91
ERBB2-221ENST00000584888 PPIGQ13427 754 aaKnown RBP eCLIP20.73■□□□□ 0.91
ERBB2-221ENST00000584888 C16orf59Q7L2K0 433 aa20.73■□□□□ 0.91
ERBB2-221ENST00000584888 ZNF654Q8IZM8 581 aa20.73■□□□□ 0.91
ERBB2-221ENST00000584888 TMEM199Q8N511 208 aa20.73■□□□□ 0.91
ERBB2-221ENST00000584888 CDX2Q99626 313 aaPredicted RBP20.73■□□□□ 0.91
ERBB2-221ENST00000584888 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.73■□□□□ 0.91
ERBB2-221ENST00000584888 PPP1R12CQ9BZL4 782 aa20.73■□□□□ 0.91
ERBB2-221ENST00000584888 TTYH1Q9H313 450 aaPredicted RBP20.73■□□□□ 0.91
ERBB2-221ENST00000584888 DLL1O00548 723 aa20.72■□□□□ 0.91
ERBB2-221ENST00000584888 ZBTB5O15062 677 aa20.72■□□□□ 0.91
ERBB2-221ENST00000584888 DDAH1O94760 285 aa20.72■□□□□ 0.91
ERBB2-221ENST00000584888 CSF2RAP15509 400 aa20.72■□□□□ 0.91
ERBB2-221ENST00000584888 PSMC6P62333 389 aa20.72■□□□□ 0.91
ERBB2-221ENST00000584888 SEZ6LQ9BYH1 1024 aa20.72■□□□□ 0.91
ERBB2-221ENST00000584888 LAMA2P24043 3122 aaKnown RBP20.72■□□□□ 0.91
ERBB2-221ENST00000584888 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.71■□□□□ 0.91
ERBB2-221ENST00000584888 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.71■□□□□ 0.91
ERBB2-221ENST00000584888 OPLAHO14841 1288 aa20.71■□□□□ 0.91
ERBB2-221ENST00000584888 EDNRBP24530 442 aa20.71■□□□□ 0.91
ERBB2-221ENST00000584888 CYP2C18P33260 490 aa20.71■□□□□ 0.91
ERBB2-221ENST00000584888 GHRHRQ02643 423 aa20.71■□□□□ 0.91
ERBB2-221ENST00000584888 PDE4DQ08499 809 aa20.71■□□□□ 0.91
ERBB2-221ENST00000584888 ADCK5Q3MIX3 580 aa20.71■□□□□ 0.91
ERBB2-221ENST00000584888 TMEM240Q5SV17 173 aa20.71■□□□□ 0.91
ERBB2-221ENST00000584888 SGMS1Q86VZ5 419 aa20.71■□□□□ 0.91
ERBB2-221ENST00000584888 DNERQ8NFT8 737 aa20.71■□□□□ 0.91
ERBB2-221ENST00000584888 NEK1Q96PY6 1258 aa20.71■□□□□ 0.91
ERBB2-221ENST00000584888 MPHOSPH6Q99547 160 aaKnown RBP20.71■□□□□ 0.91
ERBB2-221ENST00000584888 AMNQ9BXJ7 453 aa20.71■□□□□ 0.91
ERBB2-221ENST00000584888 MRPL11Q9Y3B7 192 aaKnown RBP20.71■□□□□ 0.91
ERBB2-221ENST00000584888 DHX16O60231 1041 aaKnown RBP20.7■□□□□ 0.9
ERBB2-221ENST00000584888 SMARCA1P28370 1054 aa20.7■□□□□ 0.9
ERBB2-221ENST00000584888 SYTL5Q8TDW5 730 aaPredicted RBP20.7■□□□□ 0.9
ERBB2-221ENST00000584888 TRPV6Q9H1D0 765 aa20.7■□□□□ 0.9
ERBB2-221ENST00000584888 B4GALT4O60513 344 aa20.69■□□□□ 0.9
ERBB2-221ENST00000584888 ACRP10323 421 aa20.69■□□□□ 0.9
ERBB2-221ENST00000584888 HSPA4P34932 840 aa20.69■□□□□ 0.9
ERBB2-221ENST00000584888 ZNF365Q70YC5 407 aa20.69■□□□□ 0.9
ERBB2-221ENST00000584888 DHX32Q7L7V1 743 aaKnown RBP20.69■□□□□ 0.9
ERBB2-221ENST00000584888 MCF2L2Q86YR7 1114 aa20.69■□□□□ 0.9
ERBB2-221ENST00000584888 OR6J1Q8NGC5 347 aa20.69■□□□□ 0.9
ERBB2-221ENST00000584888 PIGSQ96S52 555 aa20.69■□□□□ 0.9
ERBB2-221ENST00000584888 MYL10Q9BUA6 226 aa20.69■□□□□ 0.9
ERBB2-221ENST00000584888 SPZ1Q9BXG8 430 aa20.69■□□□□ 0.9
ERBB2-221ENST00000584888 LRRC2Q9BYS8 371 aa20.69■□□□□ 0.9
ERBB2-221ENST00000584888 HIPK3Q9H422 1215 aa20.69■□□□□ 0.9
ERBB2-221ENST00000584888 POLR3EQ9NVU0 708 aa20.69■□□□□ 0.9
ERBB2-221ENST00000584888 COL20A1Q9P218 1284 aa20.69■□□□□ 0.9
ERBB2-221ENST00000584888 TMEM265A0A087WTH1 108 aa20.68■□□□□ 0.9
ERBB2-221ENST00000584888 PNMA6FA0A0J9YX94 578 aa20.68■□□□□ 0.9
ERBB2-221ENST00000584888 B4DLN1 442 aa20.68■□□□□ 0.9
ERBB2-221ENST00000584888 CPT1AP50416 773 aa20.68■□□□□ 0.9
ERBB2-221ENST00000584888 MRPL12P52815 198 aaKnown RBP20.68■□□□□ 0.9
ERBB2-221ENST00000584888 PURAQ00577 322 aaKnown RBP20.68■□□□□ 0.9
ERBB2-221ENST00000584888 KRT32Q14532 448 aa20.68■□□□□ 0.9
ERBB2-221ENST00000584888 PPP2R5BQ15173 497 aa20.68■□□□□ 0.9
ERBB2-221ENST00000584888 RASIP1Q5U651 963 aa20.68■□□□□ 0.9
ERBB2-221ENST00000584888 SCFD2Q8WU76 684 aa20.68■□□□□ 0.9
ERBB2-221ENST00000584888 CCDC69A6NI79 296 aa20.67■□□□□ 0.9
ERBB2-221ENST00000584888 NKRFO15226 690 aaKnown RBP eCLIP20.67■□□□□ 0.93e-7■■□□□ 13.6
ERBB2-221ENST00000584888 EPB41L2O43491 1005 aaKnown RBP20.67■□□□□ 0.9
ERBB2-221ENST00000584888 MYL3P08590 195 aa20.67■□□□□ 0.9
ERBB2-221ENST00000584888 DNAJB2P25686 324 aa20.67■□□□□ 0.9
ERBB2-221ENST00000584888 HSD17B4P51659 736 aa20.67■□□□□ 0.9
ERBB2-221ENST00000584888 PSRC1Q6PGN9 363 aaPredicted RBP20.67■□□□□ 0.9
ERBB2-221ENST00000584888 SAMD3Q8N6K7 520 aa20.67■□□□□ 0.9
ERBB2-221ENST00000584888 MYLIPQ8WY64 445 aa20.67■□□□□ 0.9
ERBB2-221ENST00000584888 TAAR1Q96RJ0 339 aa20.67■□□□□ 0.9
ERBB2-221ENST00000584888 LZTS2Q9BRK4 669 aa20.67■□□□□ 0.9
ERBB2-221ENST00000584888 NOC4LQ9BVI4 516 aaKnown RBP20.67■□□□□ 0.9
ERBB2-221ENST00000584888 IL23AQ9NPF7 189 aa20.67■□□□□ 0.9
ERBB2-221ENST00000584888 PCDHA1Q9Y5I3 950 aa20.67■□□□□ 0.9
ERBB2-221ENST00000584888 SNX14Q9Y5W7 946 aa20.67■□□□□ 0.9
ERBB2-221ENST00000584888 UMODL1Q5DID0 1318 aa20.67■□□□□ 0.9
ERBB2-221ENST00000584888 CALM1P0DP23 149 aa20.66■□□□□ 0.9
ERBB2-221ENST00000584888 CALM2P0DP24 149 aa20.66■□□□□ 0.9
ERBB2-221ENST00000584888 CALM3P0DP25 149 aa20.66■□□□□ 0.9
ERBB2-221ENST00000584888 KIF5BP33176 963 aa20.66■□□□□ 0.9
ERBB2-221ENST00000584888 GNAQP50148 359 aa20.66■□□□□ 0.9
ERBB2-221ENST00000584888 CCL23P55773 120 aa20.66■□□□□ 0.9
ERBB2-221ENST00000584888 NFXL1Q6ZNB6 911 aa20.66■□□□□ 0.9
ERBB2-221ENST00000584888 SRBD1Q8N5C6 995 aaKnown RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms