RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 TBC1D5Q92609 795 aa15.46■□□□□ 0.07
SREBF1-223ENST00000584760 TSEN34Q9BSV6 310 aaKnown RBP15.46■□□□□ 0.07
SREBF1-223ENST00000584760 AMNQ9BXJ7 453 aa15.46■□□□□ 0.07
SREBF1-223ENST00000584760 STARD7Q9NQZ5 370 aa15.46■□□□□ 0.07
SREBF1-223ENST00000584760 PDGFCQ9NRA1 345 aa15.46■□□□□ 0.07
SREBF1-223ENST00000584760 COL20A1Q9P218 1284 aa15.46■□□□□ 0.07
SREBF1-223ENST00000584760 MRPL11Q9Y3B7 192 aaKnown RBP15.46■□□□□ 0.07
SREBF1-223ENST00000584760 VCANP13611 3396 aa15.46■□□□□ 0.07
SREBF1-223ENST00000584760 EYSQ5T1H1 3165 aa15.45■□□□□ 0.06
SREBF1-223ENST00000584760 TNFRSF10AO00220 468 aa15.45■□□□□ 0.06
SREBF1-223ENST00000584760 C6orf222P0C671 652 aaPredicted RBP15.45■□□□□ 0.06
SREBF1-223ENST00000584760 TNFAIP2Q03169 654 aa15.45■□□□□ 0.06
SREBF1-223ENST00000584760 ADCK5Q3MIX3 580 aa15.45■□□□□ 0.06
SREBF1-223ENST00000584760 ANKRD33Q7Z3H0 272 aa15.45■□□□□ 0.06
SREBF1-223ENST00000584760 TLK2Q86UE8 772 aa15.45■□□□□ 0.06
SREBF1-223ENST00000584760 HOMER1Q86YM7 354 aa15.45■□□□□ 0.06
SREBF1-223ENST00000584760 MCF2L2Q86YR7 1114 aa15.45■□□□□ 0.06
SREBF1-223ENST00000584760 SYTL5Q8TDW5 730 aaPredicted RBP15.45■□□□□ 0.06
SREBF1-223ENST00000584760 NUP133Q8WUM0 1156 aa15.45■□□□□ 0.06
SREBF1-223ENST00000584760 TIFAQ96CG3 184 aa15.45■□□□□ 0.06
SREBF1-223ENST00000584760 TOX2Q96NM4 488 aa15.45■□□□□ 0.06
SREBF1-223ENST00000584760 NEK1Q96PY6 1258 aa15.45■□□□□ 0.06
SREBF1-223ENST00000584760 PIGSQ96S52 555 aa15.45■□□□□ 0.06
SREBF1-223ENST00000584760 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.45■□□□□ 0.062e-10■■■■□ 20.7
SREBF1-223ENST00000584760 SPZ1Q9BXG8 430 aa15.45■□□□□ 0.06
SREBF1-223ENST00000584760 LRRC2Q9BYS8 371 aa15.45■□□□□ 0.06
SREBF1-223ENST00000584760 MOXD2PA6NHM9 499 aa15.44■□□□□ 0.06
SREBF1-223ENST00000584760 TIMP1P01033 207 aa15.44■□□□□ 0.06
SREBF1-223ENST00000584760 SMPD1P17405 629 aa15.44■□□□□ 0.06
SREBF1-223ENST00000584760 COL9A1P20849 921 aa15.44■□□□□ 0.06
SREBF1-223ENST00000584760 PTGS1P23219 599 aa15.44■□□□□ 0.06
SREBF1-223ENST00000584760 KIF5BP33176 963 aa15.44■□□□□ 0.06
SREBF1-223ENST00000584760 HSD17B4P51659 736 aa15.44■□□□□ 0.06
SREBF1-223ENST00000584760 KCNA10Q16322 511 aa15.44■□□□□ 0.06
SREBF1-223ENST00000584760 TMEM63BQ5T3F8 832 aa15.44■□□□□ 0.06
SREBF1-223ENST00000584760 NFXL1Q6ZNB6 911 aa15.44■□□□□ 0.06
SREBF1-223ENST00000584760 SGMS1Q86VZ5 419 aa15.44■□□□□ 0.06
SREBF1-223ENST00000584760 TMTC2Q8N394 836 aa15.44■□□□□ 0.06
SREBF1-223ENST00000584760 CTCFLQ8NI51 663 aaPredicted RBP15.44■□□□□ 0.06
SREBF1-223ENST00000584760 KCNB2Q92953 911 aa15.44■□□□□ 0.06
SREBF1-223ENST00000584760 SPC25Q9HBM1 224 aa15.44■□□□□ 0.06
SREBF1-223ENST00000584760 PCDHA1Q9Y5I3 950 aa15.44■□□□□ 0.06
SREBF1-223ENST00000584760 RBM47A0AV96 593 aaKnown RBP15.43■□□□□ 0.06
SREBF1-223ENST00000584760 CCDC69A6NI79 296 aa15.43■□□□□ 0.06
SREBF1-223ENST00000584760 GRXCR1A8MXD5 290 aa15.43■□□□□ 0.06
SREBF1-223ENST00000584760 RXRAP19793 462 aa15.43■□□□□ 0.06
SREBF1-223ENST00000584760 HSPA4P34932 840 aa15.43■□□□□ 0.06
SREBF1-223ENST00000584760 PBX2P40425 430 aa15.43■□□□□ 0.06
SREBF1-223ENST00000584760 EXOSC10Q01780 885 aaKnown RBP15.43■□□□□ 0.06
SREBF1-223ENST00000584760 PDE4DQ08499 809 aa15.43■□□□□ 0.06
SREBF1-223ENST00000584760 KRT32Q14532 448 aa15.43■□□□□ 0.06
SREBF1-223ENST00000584760 IQSEC1Q6DN90 963 aa15.43■□□□□ 0.06
SREBF1-223ENST00000584760 VTI1AQ96AJ9 217 aa15.43■□□□□ 0.06
SREBF1-223ENST00000584760 TCEANC2Q96MN5 208 aa15.43■□□□□ 0.06
SREBF1-223ENST00000584760 MPHOSPH6Q99547 160 aaKnown RBP15.43■□□□□ 0.06
SREBF1-223ENST00000584760 SPTBN5Q9NRC6 3674 aaKnown RBP15.42■□□□□ 0.06
SREBF1-223ENST00000584760 PNMA6FA0A0J9YX94 578 aa15.42■□□□□ 0.06
SREBF1-223ENST00000584760 PLEKHA8P1O95397 391 aa15.42■□□□□ 0.06
SREBF1-223ENST00000584760 CFBP00751 764 aa15.42■□□□□ 0.06
SREBF1-223ENST00000584760 ASGR1P07306 291 aa15.42■□□□□ 0.06
SREBF1-223ENST00000584760 CALM1P0DP23 149 aa15.42■□□□□ 0.06
SREBF1-223ENST00000584760 CALM2P0DP24 149 aa15.42■□□□□ 0.06
SREBF1-223ENST00000584760 CALM3P0DP25 149 aa15.42■□□□□ 0.06
SREBF1-223ENST00000584760 SMARCA1P28370 1054 aa15.42■□□□□ 0.06
SREBF1-223ENST00000584760 DUSP28Q4G0W2 176 aa15.42■□□□□ 0.06
SREBF1-223ENST00000584760 GNASQ5JWF2 1037 aa15.42■□□□□ 0.06
SREBF1-223ENST00000584760 MFSD5Q6N075 450 aa15.42■□□□□ 0.06
SREBF1-223ENST00000584760 NOL8Q76FK4 1167 aaKnown RBP15.42■□□□□ 0.06
SREBF1-223ENST00000584760 C16orf59Q7L2K0 433 aa15.42■□□□□ 0.06
SREBF1-223ENST00000584760 DHX32Q7L7V1 743 aaKnown RBP15.42■□□□□ 0.06
SREBF1-223ENST00000584760 PCSK9Q8NBP7 692 aaKnown RBP15.42■□□□□ 0.06
SREBF1-223ENST00000584760 NSUN6Q8TEA1 469 aaKnown RBP15.42■□□□□ 0.06
SREBF1-223ENST00000584760 TAAR1Q96RJ0 339 aa15.42■□□□□ 0.06
SREBF1-223ENST00000584760 GAS2L1Q99501 681 aaPredicted RBP15.42■□□□□ 0.06
SREBF1-223ENST00000584760 PRDM12Q9H4Q4 367 aa15.42■□□□□ 0.06
SREBF1-223ENST00000584760 TBX21Q9UL17 535 aa15.42■□□□□ 0.06
SREBF1-223ENST00000584760 Q9Y3F1 56 aa15.42■□□□□ 0.06
SREBF1-223ENST00000584760 SLC12A7Q9Y666 1083 aa15.42■□□□□ 0.06
SREBF1-223ENST00000584760 SCN10AQ9Y5Y9 1956 aa15.42■□□□□ 0.06
SREBF1-223ENST00000584760 MYH7BA7E2Y1 1941 aa15.41■□□□□ 0.06
SREBF1-223ENST00000584760 B4DLN1 442 aa15.41■□□□□ 0.06
SREBF1-223ENST00000584760 REC8O95072 547 aa15.41■□□□□ 0.06
SREBF1-223ENST00000584760 CSF2RAP15509 400 aa15.41■□□□□ 0.06
SREBF1-223ENST00000584760 GNAQP50148 359 aa15.41■□□□□ 0.06
SREBF1-223ENST00000584760 MRPL12P52815 198 aaKnown RBP15.41■□□□□ 0.06
SREBF1-223ENST00000584760 BEX3Q00994 111 aa15.41■□□□□ 0.06
SREBF1-223ENST00000584760 TRAF1Q13077 416 aa15.41■□□□□ 0.06
SREBF1-223ENST00000584760 PPIGQ13427 754 aaKnown RBP eCLIP15.41■□□□□ 0.062e-9■□□□□ 9.9
SREBF1-223ENST00000584760 FSCN1Q16658 493 aaKnown RBP15.41■□□□□ 0.06
SREBF1-223ENST00000584760 TMEM240Q5SV17 173 aa15.41■□□□□ 0.06
SREBF1-223ENST00000584760 APOA5Q6Q788 366 aa15.41■□□□□ 0.06
SREBF1-223ENST00000584760 MICU3Q86XE3 530 aa15.41■□□□□ 0.06
SREBF1-223ENST00000584760 RAB11FIP4Q86YS3 637 aa15.41■□□□□ 0.06
SREBF1-223ENST00000584760 SRBD1Q8N5C6 995 aaKnown RBP15.41■□□□□ 0.06
SREBF1-223ENST00000584760 GLT1D1Q96MS3 346 aa15.41■□□□□ 0.06
SREBF1-223ENST00000584760 RMDN3Q96TC7 470 aa15.41■□□□□ 0.06
SREBF1-223ENST00000584760 LZTS2Q9BRK4 669 aa15.41■□□□□ 0.06
SREBF1-223ENST00000584760 PBX4Q9BYU1 374 aa15.41■□□□□ 0.06
SREBF1-223ENST00000584760 WDR11Q9BZH6 1224 aa15.41■□□□□ 0.06
SREBF1-223ENST00000584760 PXMP2Q9NR77 195 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms