RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 ADD3Q9UEY8 706 aaKnown RBP16.78■□□□□ 0.28
CSNK1D-224ENST00000584672 SYNPO2Q9UMS6 1093 aa16.78■□□□□ 0.28
CSNK1D-224ENST00000584672 PLIN4Q96Q06 1357 aa16.77■□□□□ 0.28
CSNK1D-224ENST00000584672 RAD50Q92878 1312 aa16.77■□□□□ 0.28
CSNK1D-224ENST00000584672 M0R2C6 588 aa16.77■□□□□ 0.28
CSNK1D-224ENST00000584672 GPAA1O43292 621 aa16.77■□□□□ 0.28
CSNK1D-224ENST00000584672 CCDC96Q2M329 555 aa16.77■□□□□ 0.28
CSNK1D-224ENST00000584672 LRRFIP1Q32MZ4 808 aaKnown RBP16.77■□□□□ 0.28
CSNK1D-224ENST00000584672 GDF6Q6KF10 455 aaPredicted RBP16.77■□□□□ 0.28
CSNK1D-224ENST00000584672 CNKSR3Q6P9H4 555 aa16.77■□□□□ 0.28
CSNK1D-224ENST00000584672 GIMAP6Q6P9H5 292 aa16.77■□□□□ 0.28
CSNK1D-224ENST00000584672 LRRC8DQ7L1W4 858 aa16.77■□□□□ 0.28
CSNK1D-224ENST00000584672 SIRT2Q8IXJ6 389 aa16.77■□□□□ 0.28
CSNK1D-224ENST00000584672 CCDC155Q8N6L0 562 aa16.77■□□□□ 0.28
CSNK1D-224ENST00000584672 FBXO22Q8NEZ5 403 aa16.77■□□□□ 0.28
CSNK1D-224ENST00000584672 AFAP1L1Q8TED9 768 aa16.77■□□□□ 0.28
CSNK1D-224ENST00000584672 RAD9AQ99638 391 aa16.77■□□□□ 0.28
CSNK1D-224ENST00000584672 STX8Q9UNK0 236 aa16.77■□□□□ 0.28
CSNK1D-224ENST00000584672 ZNF318Q5VUA4 2279 aa16.76■□□□□ 0.27
CSNK1D-224ENST00000584672 RBM47A0AV96 593 aaKnown RBP16.76■□□□□ 0.27
CSNK1D-224ENST00000584672 SMARCA5O60264 1052 aaPredicted RBP16.76■□□□□ 0.27
CSNK1D-224ENST00000584672 ICAM1P05362 532 aa16.76■□□□□ 0.27
CSNK1D-224ENST00000584672 SELPP16109 830 aa16.76■□□□□ 0.27
CSNK1D-224ENST00000584672 SLC16A2P36021 539 aa16.76■□□□□ 0.27
CSNK1D-224ENST00000584672 PTPN11Q06124 597 aaPredicted RBP16.76■□□□□ 0.27
CSNK1D-224ENST00000584672 PDE4DQ08499 809 aa16.76■□□□□ 0.27
CSNK1D-224ENST00000584672 RCSD1Q6JBY9 416 aa16.76■□□□□ 0.27
CSNK1D-224ENST00000584672 HFE2Q6ZVN8 426 aa16.76■□□□□ 0.27
CSNK1D-224ENST00000584672 DHX38Q92620 1227 aaKnown RBP16.76■□□□□ 0.27
CSNK1D-224ENST00000584672 CTAGE1Q96RT6 745 aa16.76■□□□□ 0.27
CSNK1D-224ENST00000584672 A6NJR5 290 aa16.75■□□□□ 0.27
CSNK1D-224ENST00000584672 NMT2O60551 498 aa16.75■□□□□ 0.27
CSNK1D-224ENST00000584672 NBNO60934 754 aa16.75■□□□□ 0.27
CSNK1D-224ENST00000584672 RAB11FIP3O75154 756 aa16.75■□□□□ 0.27
CSNK1D-224ENST00000584672 HMMRO75330 724 aa16.75■□□□□ 0.27
CSNK1D-224ENST00000584672 TXNP10599 105 aaKnown RBP16.75■□□□□ 0.27
CSNK1D-224ENST00000584672 TTBK2Q6IQ55 1244 aa16.75■□□□□ 0.27
CSNK1D-224ENST00000584672 CAGE1Q8TC20 777 aa16.75■□□□□ 0.27
CSNK1D-224ENST00000584672 APPBP2Q92624 585 aa16.75■□□□□ 0.27
CSNK1D-224ENST00000584672 KPNA6O60684 536 aa16.74■□□□□ 0.27
CSNK1D-224ENST00000584672 ARIH2O95376 493 aa16.74■□□□□ 0.27
CSNK1D-224ENST00000584672 PDE4BQ07343 736 aa16.74■□□□□ 0.27
CSNK1D-224ENST00000584672 CHST3Q7LGC8 479 aa16.74■□□□□ 0.27
CSNK1D-224ENST00000584672 IFNL3Q8IZI9 196 aa16.74■□□□□ 0.27
CSNK1D-224ENST00000584672 NEK9Q8TD19 979 aa16.74■□□□□ 0.27
CSNK1D-224ENST00000584672 SCFD2Q8WU76 684 aa16.74■□□□□ 0.27
CSNK1D-224ENST00000584672 POTEB3A0JP26 581 aa16.73■□□□□ 0.27
CSNK1D-224ENST00000584672 NKRFO15226 690 aaKnown RBP eCLIP16.73■□□□□ 0.27
CSNK1D-224ENST00000584672 PLA2G6O60733 806 aa16.73■□□□□ 0.27
CSNK1D-224ENST00000584672 CKBP12277 381 aa16.73■□□□□ 0.27
CSNK1D-224ENST00000584672 ZP2Q05996 745 aa16.73■□□□□ 0.27
CSNK1D-224ENST00000584672 TSHZ3Q63HK5 1081 aa16.73■□□□□ 0.27
CSNK1D-224ENST00000584672 POTEBQ6S5H4 581 aa16.73■□□□□ 0.27
CSNK1D-224ENST00000584672 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.73■□□□□ 0.272e-10■■□□□ 12.8
CSNK1D-224ENST00000584672 KBTBD3Q8NAB2 608 aa16.73■□□□□ 0.27
CSNK1D-224ENST00000584672 AFG1LQ8WV93 481 aa16.73■□□□□ 0.27
CSNK1D-224ENST00000584672 MRPL38Q96DV4 380 aaKnown RBP16.73■□□□□ 0.27
CSNK1D-224ENST00000584672 RANBP17Q9H2T7 1088 aaKnown RBP16.73■□□□□ 0.27
CSNK1D-224ENST00000584672 INCENPQ9NQS7 918 aa16.73■□□□□ 0.27
CSNK1D-224ENST00000584672 FRMPD2Q68DX3 1309 aaPredicted RBP16.72■□□□□ 0.27
CSNK1D-224ENST00000584672 ABHD14A-ACY1A0A1B0GW23 586 aa16.72■□□□□ 0.27
CSNK1D-224ENST00000584672 RNF113AO15541 343 aaKnown RBP16.72■□□□□ 0.27
CSNK1D-224ENST00000584672 CXCL10P02778 98 aa16.72■□□□□ 0.27
CSNK1D-224ENST00000584672 IKBKEQ14164 716 aa16.72■□□□□ 0.27
CSNK1D-224ENST00000584672 CLUL1Q15846 466 aa16.72■□□□□ 0.27
CSNK1D-224ENST00000584672 PUS10Q3MIT2 529 aaKnown RBP16.72■□□□□ 0.27
CSNK1D-224ENST00000584672 TCEAL5Q5H9L2 206 aa16.72■□□□□ 0.27
CSNK1D-224ENST00000584672 SEC62Q99442 399 aaKnown RBP16.72■□□□□ 0.27
CSNK1D-224ENST00000584672 KCNH6Q9H252 994 aa16.72■□□□□ 0.27
CSNK1D-224ENST00000584672 GPCPD1Q9NPB8 672 aa16.72■□□□□ 0.27
CSNK1D-224ENST00000584672 MICAL3Q7RTP6 2002 aa16.71■□□□□ 0.27
CSNK1D-224ENST00000584672 TSPY2A6NKD2 308 aa16.71■□□□□ 0.27
CSNK1D-224ENST00000584672 MMP3P08254 477 aa16.71■□□□□ 0.27
CSNK1D-224ENST00000584672 GNAT2P19087 354 aa16.71■□□□□ 0.27
CSNK1D-224ENST00000584672 IRS1P35568 1242 aa16.71■□□□□ 0.27
CSNK1D-224ENST00000584672 CTDSPL2Q05D32 466 aa16.71■□□□□ 0.27
CSNK1D-224ENST00000584672 PPARAQ07869 468 aa16.71■□□□□ 0.27
CSNK1D-224ENST00000584672 SYDE2Q5VT97 1194 aa16.71■□□□□ 0.27
CSNK1D-224ENST00000584672 RNF207Q6ZRF8 634 aa16.71■□□□□ 0.27
CSNK1D-224ENST00000584672 MYOCDQ8IZQ8 938 aa16.71■□□□□ 0.27
CSNK1D-224ENST00000584672 BANK1Q8NDB2 785 aa16.71■□□□□ 0.27
CSNK1D-224ENST00000584672 WNT8BQ93098 351 aa16.71■□□□□ 0.27
CSNK1D-224ENST00000584672 ALG1Q9BT22 464 aa16.71■□□□□ 0.27
CSNK1D-224ENST00000584672 IL17RBQ9NRM6 502 aa16.71■□□□□ 0.27
CSNK1D-224ENST00000584672 CLDND1Q9NY35 253 aa16.71■□□□□ 0.27
CSNK1D-224ENST00000584672 MUTYHQ9UIF7 546 aa16.71■□□□□ 0.27
CSNK1D-224ENST00000584672 NLRC5Q86WI3 1866 aa16.71■□□□□ 0.27
CSNK1D-224ENST00000584672 MYO7AQ13402 2215 aa16.7■□□□□ 0.26
CSNK1D-224ENST00000584672 TRIOO75962 3097 aa16.7■□□□□ 0.26
CSNK1D-224ENST00000584672 PATL2C9JE40 543 aaKnown RBP16.7■□□□□ 0.26
CSNK1D-224ENST00000584672 SLC3A2P08195 630 aaKnown RBP16.7■□□□□ 0.26
CSNK1D-224ENST00000584672 RPS6P62753 249 aaKnown RBP16.7■□□□□ 0.26
CSNK1D-224ENST00000584672 GPM6BQ13491 265 aa16.7■□□□□ 0.26
CSNK1D-224ENST00000584672 MBTPS1Q14703 1052 aa16.7■□□□□ 0.26
CSNK1D-224ENST00000584672 EPC2Q52LR7 807 aa16.7■□□□□ 0.26
CSNK1D-224ENST00000584672 TIGD5Q53EQ6 642 aa16.7■□□□□ 0.26
CSNK1D-224ENST00000584672 ZNF618Q5T7W0 954 aa16.7■□□□□ 0.26
CSNK1D-224ENST00000584672 CLEC4DQ8WXI8 215 aa16.7■□□□□ 0.26
CSNK1D-224ENST00000584672 KAT2BQ92831 832 aa16.7■□□□□ 0.26
CSNK1D-224ENST00000584672 NAPBQ9H115 298 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms