RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 MED15Q96RN5 788 aa11.51□□□□□ -0.57
RFFL-212ENST00000584655 P2RX7Q99572 595 aaKnown RBP11.51□□□□□ -0.57
RFFL-212ENST00000584655 MYCP01106 439 aaPredicted RBP11.51□□□□□ -0.57
RFFL-212ENST00000584655 PDIA4P13667 645 aaKnown RBP11.51□□□□□ -0.57
RFFL-212ENST00000584655 CYP27A1Q02318 531 aa11.51□□□□□ -0.57
RFFL-212ENST00000584655 CCDC40Q4G0X9 1142 aa11.51□□□□□ -0.57
RFFL-212ENST00000584655 FILIP1LQ4L180 1135 aa11.51□□□□□ -0.57
RFFL-212ENST00000584655 PAXIP1Q6ZW49 1069 aaPredicted RBP11.51□□□□□ -0.57
RFFL-212ENST00000584655 ACRBPQ8NEB7 543 aa11.51□□□□□ -0.57
RFFL-212ENST00000584655 AMNQ9BXJ7 453 aa11.51□□□□□ -0.57
RFFL-212ENST00000584655 FGFBP2Q9BYJ0 223 aa11.51□□□□□ -0.57
RFFL-212ENST00000584655 PCDHB13Q9Y5F0 798 aa11.51□□□□□ -0.57
RFFL-212ENST00000584655 WDR19Q8NEZ3 1342 aa11.51□□□□□ -0.57
RFFL-212ENST00000584655 STK36Q9NRP7 1315 aa11.51□□□□□ -0.57
RFFL-212ENST00000584655 ADM5C9JUS6 153 aa11.51□□□□□ -0.57
RFFL-212ENST00000584655 H7C1D1 291 aa11.51□□□□□ -0.57
RFFL-212ENST00000584655 TPM3P06753 285 aa11.51□□□□□ -0.57
RFFL-212ENST00000584655 USP8P40818 1118 aa11.51□□□□□ -0.57
RFFL-212ENST00000584655 MATR3P43243 847 aaKnown RBP eCLIP11.51□□□□□ -0.573e-6■■■□□ 15.2
RFFL-212ENST00000584655 RBL2Q08999 1139 aa11.51□□□□□ -0.57
RFFL-212ENST00000584655 PAK1Q13153 545 aa11.51□□□□□ -0.57
RFFL-212ENST00000584655 SIAH1Q8IUQ4 282 aa11.51□□□□□ -0.57
RFFL-212ENST00000584655 IRS2Q9Y4H2 1338 aa11.51□□□□□ -0.57
RFFL-212ENST00000584655 TNRC6CQ9HCJ0 1690 aaKnown RBP11.51□□□□□ -0.57
RFFL-212ENST00000584655 PRPF6O94906 941 aaKnown RBP11.51□□□□□ -0.57
RFFL-212ENST00000584655 MORC3Q14149 939 aa11.51□□□□□ -0.57
RFFL-212ENST00000584655 ATL3Q6DD88 541 aa11.51□□□□□ -0.57
RFFL-212ENST00000584655 HHIPL2Q6UWX4 724 aa11.51□□□□□ -0.57
RFFL-212ENST00000584655 GADL1Q6ZQY3 521 aa11.51□□□□□ -0.57
RFFL-212ENST00000584655 SV2BQ7L1I2 683 aa11.51□□□□□ -0.57
RFFL-212ENST00000584655 FERMT2Q96AC1 680 aa11.51□□□□□ -0.57
RFFL-212ENST00000584655 OTUD5Q96G74 571 aa11.51□□□□□ -0.57
RFFL-212ENST00000584655 PUF60Q9UHX1 559 aaKnown RBP11.51□□□□□ -0.57
RFFL-212ENST00000584655 HPSEQ9Y251 543 aa11.51□□□□□ -0.57
RFFL-212ENST00000584655 GAKO14976 1311 aa11.5□□□□□ -0.57
RFFL-212ENST00000584655 NFKBIEO00221 500 aa11.5□□□□□ -0.57
RFFL-212ENST00000584655 ARHGAP4P98171 946 aa11.5□□□□□ -0.57
RFFL-212ENST00000584655 RTKN2Q8IZC4 609 aa11.5□□□□□ -0.57
RFFL-212ENST00000584655 DDX12PQ92771 950 aa11.5□□□□□ -0.57
RFFL-212ENST00000584655 GUCA1BQ9UMX6 200 aa11.5□□□□□ -0.57
RFFL-212ENST00000584655 TDRD12Q587J7 1177 aaKnown RBP11.5□□□□□ -0.57
RFFL-212ENST00000584655 TOGARAM2Q6ZUX3 1019 aa11.5□□□□□ -0.57
RFFL-212ENST00000584655 TMEM179Q6ZVK1 233 aa11.5□□□□□ -0.57
RFFL-212ENST00000584655 CCDC112Q8NEF3 446 aa11.5□□□□□ -0.57
RFFL-212ENST00000584655 ANKRD20A12PQ8NF67 263 aa11.5□□□□□ -0.57
RFFL-212ENST00000584655 KIAA1524Q8TCG1 905 aa11.5□□□□□ -0.57
RFFL-212ENST00000584655 PCIF1Q9H4Z3 704 aa11.5□□□□□ -0.57
RFFL-212ENST00000584655 TRIM10Q9UDY6 481 aa11.5□□□□□ -0.57
RFFL-212ENST00000584655 C4BP0C0L5 1744 aa11.5□□□□□ -0.57
RFFL-212ENST00000584655 NWD2Q9ULI1 1742 aa11.5□□□□□ -0.57
RFFL-212ENST00000584655 MYMKA6NI61 221 aa11.5□□□□□ -0.57
RFFL-212ENST00000584655 ENC1O14682 589 aa11.5□□□□□ -0.57
RFFL-212ENST00000584655 PNMA6AP0CW24 399 aaPredicted RBP11.5□□□□□ -0.57
RFFL-212ENST00000584655 ASPRV1Q53RT3 343 aa11.5□□□□□ -0.57
RFFL-212ENST00000584655 CCDC47Q96A33 483 aaKnown RBP11.5□□□□□ -0.57
RFFL-212ENST00000584655 CAPZA3Q96KX2 299 aa11.5□□□□□ -0.57
RFFL-212ENST00000584655 GDAP1L1Q96MZ0 367 aa11.5□□□□□ -0.57
RFFL-212ENST00000584655 MYH3P11055 1940 aa11.5□□□□□ -0.57
RFFL-212ENST00000584655 TMCO5BA8MYB1 307 aa11.49□□□□□ -0.57
RFFL-212ENST00000584655 FAM86B1E9PN63 330 aa11.49□□□□□ -0.57
RFFL-212ENST00000584655 ABL1P00519 1130 aa11.49□□□□□ -0.57
RFFL-212ENST00000584655 FAM86B2P0C5J1 330 aa11.49□□□□□ -0.57
RFFL-212ENST00000584655 KCNA1Q09470 495 aa11.49□□□□□ -0.57
RFFL-212ENST00000584655 PLA2G4DQ86XP0 818 aa11.49□□□□□ -0.57
RFFL-212ENST00000584655 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.49□□□□□ -0.57
RFFL-212ENST00000584655 SPON1Q9HCB6 807 aa11.49□□□□□ -0.57
RFFL-212ENST00000584655 PICK1Q9NRD5 415 aa11.49□□□□□ -0.57
RFFL-212ENST00000584655 MACROD2A1Z1Q3 448 aa11.49□□□□□ -0.57
RFFL-212ENST00000584655 KCNJ18B7U540 433 aa11.49□□□□□ -0.57
RFFL-212ENST00000584655 OFD1O75665 1012 aa11.49□□□□□ -0.57
RFFL-212ENST00000584655 KCNA3P22001 575 aa11.49□□□□□ -0.57
RFFL-212ENST00000584655 KRT9P35527 623 aa11.49□□□□□ -0.57
RFFL-212ENST00000584655 TBC1D8BQ0IIM8 1120 aa11.49□□□□□ -0.57
RFFL-212ENST00000584655 STIM1Q13586 685 aa11.49□□□□□ -0.57
RFFL-212ENST00000584655 KCNJ12Q14500 433 aa11.49□□□□□ -0.57
RFFL-212ENST00000584655 KIF4BQ2VIQ3 1234 aa11.49□□□□□ -0.57
RFFL-212ENST00000584655 STYK1Q6J9G0 422 aa11.49□□□□□ -0.57
RFFL-212ENST00000584655 ATG4CQ96DT6 458 aa11.49□□□□□ -0.57
RFFL-212ENST00000584655 PDCL3Q9H2J4 239 aa11.49□□□□□ -0.57
RFFL-212ENST00000584655 ZNF541Q9H0D2 1346 aa11.49□□□□□ -0.57
RFFL-212ENST00000584655 CYP2J2P51589 502 aa11.49□□□□□ -0.57
RFFL-212ENST00000584655 TERF1P54274 439 aa11.49□□□□□ -0.57
RFFL-212ENST00000584655 GABPAQ06546 454 aa11.49□□□□□ -0.57
RFFL-212ENST00000584655 TSR1Q2NL82 804 aaKnown RBP11.49□□□□□ -0.57
RFFL-212ENST00000584655 PSMA7O14818 248 aa11.48□□□□□ -0.57
RFFL-212ENST00000584655 KRT31Q15323 416 aa11.48□□□□□ -0.57
RFFL-212ENST00000584655 LRRN4CLQ8ND94 238 aa11.48□□□□□ -0.57
RFFL-212ENST00000584655 RNF225M0QZC1 329 aaPredicted RBP11.48□□□□□ -0.57
RFFL-212ENST00000584655 GCNT3O95395 438 aa11.48□□□□□ -0.57
RFFL-212ENST00000584655 ZC2HC1CQ53FD0 456 aaPredicted RBP11.48□□□□□ -0.57
RFFL-212ENST00000584655 LDHDQ86WU2 507 aa11.48□□□□□ -0.57
RFFL-212ENST00000584655 SUPT20HQ8NEM7 779 aa11.48□□□□□ -0.57
RFFL-212ENST00000584655 IL31RAQ8NI17 732 aa11.48□□□□□ -0.57
RFFL-212ENST00000584655 KIFC3Q9BVG8 833 aa11.48□□□□□ -0.57
RFFL-212ENST00000584655 NOC4LQ9BVI4 516 aaKnown RBP11.48□□□□□ -0.57
RFFL-212ENST00000584655 ZMYND12Q9H0C1 365 aa11.48□□□□□ -0.57
RFFL-212ENST00000584655 DEF6Q9H4E7 631 aa11.48□□□□□ -0.57
RFFL-212ENST00000584655 BACH1O14867 736 aa11.48□□□□□ -0.57
RFFL-212ENST00000584655 GAS7O60861 476 aa11.48□□□□□ -0.57
RFFL-212ENST00000584655 ARP10275 920 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms