RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 SPDL1Q96EA4 605 aa14.2□□□□□ -0.14
RNF43-208ENST00000584437 GPR108Q9NPR9 543 aa14.2□□□□□ -0.14
RNF43-208ENST00000584437 TTLL3Q9Y4R7 772 aa14.2□□□□□ -0.14
RNF43-208ENST00000584437 RASGRF2O14827 1237 aa14.19□□□□□ -0.14
RNF43-208ENST00000584437 MX2P20592 715 aa14.19□□□□□ -0.14
RNF43-208ENST00000584437 PHEXP78562 749 aa14.19□□□□□ -0.14
RNF43-208ENST00000584437 MYL7Q01449 175 aa14.19□□□□□ -0.14
RNF43-208ENST00000584437 TCIRG1Q13488 830 aa14.19□□□□□ -0.14
RNF43-208ENST00000584437 E2F4Q16254 413 aa14.19□□□□□ -0.14
RNF43-208ENST00000584437 ARMCX5Q6P1M9 558 aa14.19□□□□□ -0.14
RNF43-208ENST00000584437 FAM81BQ96LP2 452 aa14.19□□□□□ -0.14
RNF43-208ENST00000584437 CDCA7Q9BWT1 371 aaPredicted RBP14.19□□□□□ -0.14
RNF43-208ENST00000584437 NOVA2Q9UNW9 492 aaKnown RBP14.19□□□□□ -0.14
RNF43-208ENST00000584437 LIG4P49917 911 aa14.19□□□□□ -0.14
RNF43-208ENST00000584437 FKBP3Q00688 224 aaKnown RBP14.19□□□□□ -0.14
RNF43-208ENST00000584437 ADCY2Q08462 1091 aa14.19□□□□□ -0.14
RNF43-208ENST00000584437 TCP11X2Q5H9J9 407 aa14.19□□□□□ -0.14
RNF43-208ENST00000584437 ZMYM1Q5SVZ6 1142 aa14.19□□□□□ -0.14
RNF43-208ENST00000584437 LARP4BQ92615 738 aaKnown RBP14.19□□□□□ -0.14
RNF43-208ENST00000584437 COPRSQ9NQ92 184 aa14.19□□□□□ -0.14
RNF43-208ENST00000584437 FGFR1OP2Q9NVK5 253 aa14.19□□□□□ -0.14
RNF43-208ENST00000584437 PTPN22Q9Y2R2 807 aa14.19□□□□□ -0.14
RNF43-208ENST00000584437 AFPP02771 609 aaKnown RBP14.19□□□□□ -0.14
RNF43-208ENST00000584437 SCYL2Q6P3W7 929 aa14.19□□□□□ -0.14
RNF43-208ENST00000584437 SLC17A8Q8NDX2 589 aa14.19□□□□□ -0.14
RNF43-208ENST00000584437 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.19□□□□□ -0.14
RNF43-208ENST00000584437 IFT122Q9HBG6 1241 aa14.19□□□□□ -0.14
RNF43-208ENST00000584437 ANAPC5Q9UJX4 755 aa14.19□□□□□ -0.14
RNF43-208ENST00000584437 PFDN6O15212 129 aa14.19□□□□□ -0.14
RNF43-208ENST00000584437 TNNC2P02585 160 aa14.19□□□□□ -0.14
RNF43-208ENST00000584437 PDE1BQ01064 536 aa14.19□□□□□ -0.14
RNF43-208ENST00000584437 PPP2R5AQ15172 486 aa14.19□□□□□ -0.14
RNF43-208ENST00000584437 SGO2Q562F6 1265 aa14.19□□□□□ -0.14
RNF43-208ENST00000584437 TRAPPC3LQ5T215 181 aa14.19□□□□□ -0.14
RNF43-208ENST00000584437 CD2APQ9Y5K6 639 aa14.19□□□□□ -0.14
RNF43-208ENST00000584437 DNMT1P26358 1616 aaKnown RBP14.18□□□□□ -0.14
RNF43-208ENST00000584437 ABCC10Q5T3U5 1492 aa14.18□□□□□ -0.14
RNF43-208ENST00000584437 POLE2P56282 527 aa14.18□□□□□ -0.14
RNF43-208ENST00000584437 APOA5Q6Q788 366 aa14.18□□□□□ -0.14
RNF43-208ENST00000584437 CXorf38Q8TB03 319 aa14.18□□□□□ -0.14
RNF43-208ENST00000584437 NHEJ1Q9H9Q4 299 aaPredicted RBP14.18□□□□□ -0.14
RNF43-208ENST00000584437 MAD1L1Q9Y6D9 718 aa14.18□□□□□ -0.14
RNF43-208ENST00000584437 MSH2P43246 934 aa14.18□□□□□ -0.14
RNF43-208ENST00000584437 MUM1L1Q5H9M0 696 aa14.18□□□□□ -0.14
RNF43-208ENST00000584437 FAM102BQ5T8I3 360 aa14.18□□□□□ -0.14
RNF43-208ENST00000584437 HOOK2Q96ED9 719 aa14.18□□□□□ -0.14
RNF43-208ENST00000584437 FMO2Q99518 471 aa14.18□□□□□ -0.14
RNF43-208ENST00000584437 CENPKQ9BS16 269 aa14.18□□□□□ -0.14
RNF43-208ENST00000584437 SEMA3EO15041 775 aa14.18□□□□□ -0.14
RNF43-208ENST00000584437 CTSWP56202 376 aa14.18□□□□□ -0.14
RNF43-208ENST00000584437 NSMFQ6X4W1 530 aa14.18□□□□□ -0.14
RNF43-208ENST00000584437 CABLES1Q8TDN4 633 aa14.18□□□□□ -0.14
RNF43-208ENST00000584437 TFCP2L1Q9NZI6 479 aa14.18□□□□□ -0.14
RNF43-208ENST00000584437 SERPING1P05155 500 aa14.18□□□□□ -0.14
RNF43-208ENST00000584437 GAP43P17677 238 aa14.18□□□□□ -0.14
RNF43-208ENST00000584437 ST13P4Q8IZP2 240 aaPredicted RBP14.18□□□□□ -0.14
RNF43-208ENST00000584437 ZNF496Q96IT1 587 aaPredicted RBP14.18□□□□□ -0.14
RNF43-208ENST00000584437 NT5C1BQ96P26 610 aa14.18□□□□□ -0.14
RNF43-208ENST00000584437 PACSIN2Q9UNF0 486 aaPredicted RBP14.18□□□□□ -0.14
RNF43-208ENST00000584437 CCDC188H7C350 402 aa14.17□□□□□ -0.14
RNF43-208ENST00000584437 FOSP01100 380 aaPredicted RBP14.17□□□□□ -0.14
RNF43-208ENST00000584437 NR2F2P24468 414 aa14.17□□□□□ -0.14
RNF43-208ENST00000584437 STX1BP61266 288 aa14.17□□□□□ -0.14
RNF43-208ENST00000584437 KRT26Q7Z3Y9 468 aa14.17□□□□□ -0.14
RNF43-208ENST00000584437 H7C0C1 242 aa14.17□□□□□ -0.14
RNF43-208ENST00000584437 MAPK13O15264 365 aa14.17□□□□□ -0.14
RNF43-208ENST00000584437 PSMC2P35998 433 aaKnown RBP14.17□□□□□ -0.14
RNF43-208ENST00000584437 ATP5OP48047 213 aa14.17□□□□□ -0.14
RNF43-208ENST00000584437 TMED2Q15363 201 aa14.17□□□□□ -0.14
RNF43-208ENST00000584437 TSC22D3Q99576 134 aa14.17□□□□□ -0.14
RNF43-208ENST00000584437 ERBB4Q15303 1308 aa14.17□□□□□ -0.14
RNF43-208ENST00000584437 MOCS3O95396 460 aa14.17□□□□□ -0.14
RNF43-208ENST00000584437 CYP21A2P08686 494 aa14.17□□□□□ -0.14
RNF43-208ENST00000584437 YARSP54577 528 aaKnown RBP14.17□□□□□ -0.14
RNF43-208ENST00000584437 DEUP1Q05D60 604 aa14.17□□□□□ -0.14
RNF43-208ENST00000584437 RESTQ13127 1097 aa14.17□□□□□ -0.14
RNF43-208ENST00000584437 ZBTB8OSQ8IWT0 167 aa14.17□□□□□ -0.14
RNF43-208ENST00000584437 UIMC1Q96RL1 719 aa14.17□□□□□ -0.14
RNF43-208ENST00000584437 HESX1Q9UBX0 185 aa14.17□□□□□ -0.14
RNF43-208ENST00000584437 MAST1Q9Y2H9 1570 aa14.17□□□□□ -0.14
RNF43-208ENST00000584437 GNPATO15228 680 aa14.17□□□□□ -0.14
RNF43-208ENST00000584437 CCNE1P24864 410 aa14.17□□□□□ -0.14
RNF43-208ENST00000584437 KAZNQ674X7 775 aa14.17□□□□□ -0.14
RNF43-208ENST00000584437 PCDHA13Q9Y5I0 950 aa14.17□□□□□ -0.14
RNF43-208ENST00000584437 ATP5HO75947 161 aa14.17□□□□□ -0.14
RNF43-208ENST00000584437 APOEP02649 317 aa14.17□□□□□ -0.14
RNF43-208ENST00000584437 CC2D1AQ6P1N0 951 aaPredicted RBP14.17□□□□□ -0.14
RNF43-208ENST00000584437 RSPH3Q86UC2 560 aa14.17□□□□□ -0.14
RNF43-208ENST00000584437 EIF2AQ9BY44 585 aaKnown RBP14.17□□□□□ -0.14
RNF43-208ENST00000584437 ZMYND12Q9H0C1 365 aa14.17□□□□□ -0.14
RNF43-208ENST00000584437 CCDC87Q9NVE4 849 aa14.17□□□□□ -0.14
RNF43-208ENST00000584437 SCINQ9Y6U3 715 aa14.17□□□□□ -0.14
RNF43-208ENST00000584437 SGK1O00141 431 aa14.16□□□□□ -0.14
RNF43-208ENST00000584437 MT-ND3P03897 115 aa14.16□□□□□ -0.14
RNF43-208ENST00000584437 MAPK4P31152 587 aa14.16□□□□□ -0.14
RNF43-208ENST00000584437 EIF4A3P38919 411 aaKnown RBP14.16□□□□□ -0.14
RNF43-208ENST00000584437 GNPTABQ3T906 1256 aa14.16□□□□□ -0.14
RNF43-208ENST00000584437 NBPF10Q6P3W6 841 aaKnown RBP14.16□□□□□ -0.14
RNF43-208ENST00000584437 TEKT3Q9BXF9 490 aa14.16□□□□□ -0.14
RNF43-208ENST00000584437 TBX22Q9Y458 520 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms