RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 RPS6KB1P23443 525 aa31.39■■■□□ 2.62
SMARCD2-210ENST00000584400 RTP1P59025 263 aa31.39■■■□□ 2.62
SMARCD2-210ENST00000584400 CCSAPQ6IQ19 270 aaPredicted RBP31.39■■■□□ 2.62
SMARCD2-210ENST00000584400 Q6ZUG5 572 aa31.39■■■□□ 2.62
SMARCD2-210ENST00000584400 FBXL16Q8N461 479 aa31.39■■■□□ 2.62
SMARCD2-210ENST00000584400 STARD7Q9NQZ5 370 aa31.39■■■□□ 2.62
SMARCD2-210ENST00000584400 BRPF3Q9ULD4 1205 aa31.39■■■□□ 2.62
SMARCD2-210ENST00000584400 SMCHD1A6NHR9 2005 aa31.38■■■□□ 2.61
SMARCD2-210ENST00000584400 CCDC196A0A1B0GTZ2 297 aa31.38■■■□□ 2.61
SMARCD2-210ENST00000584400 DYNC1LI2O43237 492 aaPredicted RBP31.38■■■□□ 2.61
SMARCD2-210ENST00000584400 CASTP20810 708 aaKnown RBP31.38■■■□□ 2.61
SMARCD2-210ENST00000584400 SNX17Q15036 470 aa31.38■■■□□ 2.61
SMARCD2-210ENST00000584400 PXMP2Q9NR77 195 aa31.38■■■□□ 2.61
SMARCD2-210ENST00000584400 PRKAG2Q9UGJ0 569 aa31.38■■■□□ 2.61
SMARCD2-210ENST00000584400 NAP1L2Q9ULW6 460 aaPredicted RBP31.38■■■□□ 2.61
SMARCD2-210ENST00000584400 GOLGA8AA7E2F4 631 aa31.37■■■□□ 2.61
SMARCD2-210ENST00000584400 GOLGA8BA8MQT2 603 aa31.37■■■□□ 2.61
SMARCD2-210ENST00000584400 TTLL4Q14679 1199 aa31.37■■■□□ 2.61
SMARCD2-210ENST00000584400 CMTR1Q8N1G2 835 aaKnown RBP31.37■■■□□ 2.61
SMARCD2-210ENST00000584400 CUL5Q93034 780 aa31.37■■■□□ 2.61
SMARCD2-210ENST00000584400 ATP11BQ9Y2G3 1177 aa31.37■■■□□ 2.61
SMARCD2-210ENST00000584400 ELP1O95163 1332 aa31.36■■■□□ 2.61
SMARCD2-210ENST00000584400 MYADML2A6NDP7 307 aa31.36■■■□□ 2.61
SMARCD2-210ENST00000584400 EIF3JO75822 258 aaKnown RBP31.36■■■□□ 2.61
SMARCD2-210ENST00000584400 ASGR1P07306 291 aa31.36■■■□□ 2.61
SMARCD2-210ENST00000584400 EIF2AK2P19525 551 aaKnown RBP31.36■■■□□ 2.61
SMARCD2-210ENST00000584400 FSCN1Q16658 493 aaKnown RBP31.36■■■□□ 2.61
SMARCD2-210ENST00000584400 CCDC82Q8N4S0 544 aa31.36■■■□□ 2.61
SMARCD2-210ENST00000584400 ZMYND8Q9ULU4 1186 aaPredicted RBP31.36■■■□□ 2.61
SMARCD2-210ENST00000584400 CABYRO75952 493 aa31.35■■■□□ 2.61
SMARCD2-210ENST00000584400 NR3C2P08235 984 aa31.35■■■□□ 2.61
SMARCD2-210ENST00000584400 CPA1P15085 419 aa31.35■■■□□ 2.61
SMARCD2-210ENST00000584400 HOXA13P31271 388 aaPredicted RBP31.35■■■□□ 2.61
SMARCD2-210ENST00000584400 BRDTQ58F21 947 aaPredicted RBP31.35■■■□□ 2.61
SMARCD2-210ENST00000584400 BRF1Q92994 677 aa31.35■■■□□ 2.61
SMARCD2-210ENST00000584400 VTI1AQ96AJ9 217 aa31.35■■■□□ 2.61
SMARCD2-210ENST00000584400 LCTP09848 1927 aa31.34■■■□□ 2.61
SMARCD2-210ENST00000584400 METAP2P50579 478 aaKnown RBP eCLIP31.34■■■□□ 2.61
SMARCD2-210ENST00000584400 RUFY3Q7L099 469 aa31.34■■■□□ 2.61
SMARCD2-210ENST00000584400 TM6SF1Q9BZW5 370 aa31.34■■■□□ 2.61
SMARCD2-210ENST00000584400 ZSWIM6Q9HCJ5 1215 aa31.34■■■□□ 2.61
SMARCD2-210ENST00000584400 CYP46A1Q9Y6A2 500 aa31.34■■■□□ 2.61
SMARCD2-210ENST00000584400 TXNP10599 105 aaKnown RBP31.33■■■□□ 2.61
SMARCD2-210ENST00000584400 CPT1AP50416 773 aa31.33■■■□□ 2.61
SMARCD2-210ENST00000584400 TRIM60Q495X7 471 aa31.33■■■□□ 2.61
SMARCD2-210ENST00000584400 CHRDL2Q6WN34 429 aa31.33■■■□□ 2.61
SMARCD2-210ENST00000584400 FCHSD1Q86WN1 690 aa31.33■■■□□ 2.61
SMARCD2-210ENST00000584400 SMARCC2Q8TAQ2 1214 aa31.33■■■□□ 2.61
SMARCD2-210ENST00000584400 PDCD2LQ9BRP1 358 aa31.33■■■□□ 2.61
SMARCD2-210ENST00000584400 AGXT2Q9BYV1 514 aa31.33■■■□□ 2.61
SMARCD2-210ENST00000584400 MCM3APO60318 1980 aa31.33■■■□□ 2.61
SMARCD2-210ENST00000584400 LRRC37A2A6NM11 1700 aa31.32■■■□□ 2.61
SMARCD2-210ENST00000584400 CTAGE5O15320 804 aa31.32■■■□□ 2.6
SMARCD2-210ENST00000584400 SYN1P17600 705 aa31.32■■■□□ 2.6
SMARCD2-210ENST00000584400 BEX3Q00994 111 aa31.32■■■□□ 2.6
SMARCD2-210ENST00000584400 APOBRQ0VD83 1088 aa31.32■■■□□ 2.6
SMARCD2-210ENST00000584400 SEPT14Q6ZU15 432 aa31.32■■■□□ 2.6
SMARCD2-210ENST00000584400 OR6J1Q8NGC5 347 aa31.32■■■□□ 2.6
SMARCD2-210ENST00000584400 COLQQ9Y215 455 aaPredicted RBP31.32■■■□□ 2.6
SMARCD2-210ENST00000584400 MYH6P13533 1939 aa31.32■■■□□ 2.6
SMARCD2-210ENST00000584400 MROH7Q68CQ1 1323 aa31.31■■■□□ 2.6
SMARCD2-210ENST00000584400 PIK3CDO00329 1044 aa31.31■■■□□ 2.6
SMARCD2-210ENST00000584400 SEZ6LQ9BYH1 1024 aa31.31■■■□□ 2.6
SMARCD2-210ENST00000584400 A0A0U1RQG5 324 aaPredicted RBP31.3■■■□□ 2.6
SMARCD2-210ENST00000584400 MYCLP12524 364 aaPredicted RBP31.3■■■□□ 2.6
SMARCD2-210ENST00000584400 CCND2P30279 289 aa31.3■■■□□ 2.6
SMARCD2-210ENST00000584400 IRX5P78411 483 aaPredicted RBP31.3■■■□□ 2.6
SMARCD2-210ENST00000584400 PGM5Q15124 567 aa31.3■■■□□ 2.6
SMARCD2-210ENST00000584400 KCNV1Q6PIU1 500 aa31.3■■■□□ 2.6
SMARCD2-210ENST00000584400 HEATR3Q7Z4Q2 680 aa31.3■■■□□ 2.6
SMARCD2-210ENST00000584400 PSTPIP2Q9H939 334 aa31.3■■■□□ 2.6
SMARCD2-210ENST00000584400 POLR3EQ9NVU0 708 aa31.3■■■□□ 2.6
SMARCD2-210ENST00000584400 CNTNAP5Q8WYK1 1306 aa31.29■■■□□ 2.6
SMARCD2-210ENST00000584400 hCG_1984214I3L0E3 225 aa31.29■■■□□ 2.6
SMARCD2-210ENST00000584400 VSIG10LQ86VR7 867 aa31.29■■■□□ 2.6
SMARCD2-210ENST00000584400 TEX2Q8IWB9 1127 aa31.29■■■□□ 2.6
SMARCD2-210ENST00000584400 ZNF713Q8N859 430 aaPredicted RBP31.29■■■□□ 2.6
SMARCD2-210ENST00000584400 TOX2Q96NM4 488 aa31.29■■■□□ 2.6
SMARCD2-210ENST00000584400 LBHD1Q9BQE6 289 aaPredicted RBP31.29■■■□□ 2.6
SMARCD2-210ENST00000584400 DCDC2CA8MYV0 355 aa31.28■■■□□ 2.6
SMARCD2-210ENST00000584400 STAM2O75886 525 aa31.28■■■□□ 2.6
SMARCD2-210ENST00000584400 TLE2Q04725 743 aa31.28■■■□□ 2.6
SMARCD2-210ENST00000584400 TMEM63BQ5T3F8 832 aa31.28■■■□□ 2.6
SMARCD2-210ENST00000584400 ANKRD33Q7Z3H0 272 aa31.28■■■□□ 2.6
SMARCD2-210ENST00000584400 RBM27Q9P2N5 1060 aaKnown RBP31.28■■■□□ 2.6
SMARCD2-210ENST00000584400 MRVI1Q9Y6F6 885 aa31.28■■■□□ 2.6
SMARCD2-210ENST00000584400 hCG_1642624A0A1W2PR95 340 aa31.27■■■□□ 2.6
SMARCD2-210ENST00000584400 KPNA6O60684 536 aa31.27■■■□□ 2.6
SMARCD2-210ENST00000584400 ANAPC15P60006 121 aa31.27■■■□□ 2.6
SMARCD2-210ENST00000584400 CCDC62Q6P9F0 684 aa31.27■■■□□ 2.6
SMARCD2-210ENST00000584400 CXCL17Q6UXB2 119 aa31.27■■■□□ 2.6
SMARCD2-210ENST00000584400 PRDM5Q9NQX1 630 aaPredicted RBP31.27■■■□□ 2.6
SMARCD2-210ENST00000584400 V9GY48 417 aaPredicted RBP31.27■■■□□ 2.6
SMARCD2-210ENST00000584400 ALPK3Q96L96 1907 aa31.27■■■□□ 2.6
SMARCD2-210ENST00000584400 ARVCFO00192 962 aa31.26■■■□□ 2.59
SMARCD2-210ENST00000584400 PQBP1O60828 265 aaKnown RBP31.26■■■□□ 2.59
SMARCD2-210ENST00000584400 GH1P01241 217 aa31.26■■■□□ 2.59
SMARCD2-210ENST00000584400 CDC27P30260 824 aa31.26■■■□□ 2.59
SMARCD2-210ENST00000584400 EVCP57679 992 aa31.26■■■□□ 2.59
SMARCD2-210ENST00000584400 FUT2Q10981 343 aa31.26■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 250.9 ms