RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 WASF1Q92558 559 aa12.93□□□□□ -0.34
CDK5RAP3-231ENST00000584063 SLF1Q9BQI6 1058 aa12.93□□□□□ -0.34
CDK5RAP3-231ENST00000584063 RNF41Q9H4P4 317 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-231ENST00000584063 PDE11AQ9HCR9 933 aa12.93□□□□□ -0.34
CDK5RAP3-231ENST00000584063 DCP1AQ9NPI6 582 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-231ENST00000584063 SHTN1A0MZ66 631 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 TRIM75PA6NK02 468 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 BOLA2-SMG1P6H3BVE0 249 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 ZMYND10O75800 440 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 NPR1P16066 1061 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 MCM7P33993 719 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 SARSP49591 514 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 LONRF2Q1L5Z9 754 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 NCAPH2Q6IBW4 605 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 STAG2Q8N3U4 1231 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 PHF20Q9BVI0 1012 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 ALDH1B1P30837 517 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 HOXA10P31260 410 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 KRT2P35908 639 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 TRPC1P48995 793 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 CHMP4BP1P59074 171 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 MRPS25P82663 173 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 FXNQ16595 210 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 ZCCHC8Q6NZY4 707 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 CATIPQ7Z7H3 387 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 PAGE5Q96GU1 130 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 CRAMP1Q96RY5 1269 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 SENP7Q9BQF6 1050 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 VPS18Q9P253 973 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 HOOK1Q9UJC3 728 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 ADGRG1Q9Y653 693 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 CACNA1SQ13698 1873 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 FAM205AQ6ZU69 1335 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 PP2D1A8MPX8 630 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 VDRP11473 427 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 TBX4P57082 545 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 PTGDRQ13258 359 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 CCDC92Q53HC0 331 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 RRAGBQ5VZM2 374 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 KANK3Q6NY19 840 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 MLKLQ8NB16 471 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 SPACA7Q96KW9 195 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 NUP88Q99567 741 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 FUT8Q9BYC5 575 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 HDAC6Q9UBN7 1215 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 ATP6V0A2Q9Y487 856 aa12.92□□□□□ -0.34
CDK5RAP3-231ENST00000584063 CNTNAP5Q8WYK1 1306 aa12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 TRIM49BA6NDI0 452 aa12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 TSPY2A6NKD2 308 aa12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 N4BP3O15049 544 aa12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 BAG3O95817 575 aa12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 BTDP43251 543 aa12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 PLCD1P51178 756 aa12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 FKBP15Q5T1M5 1219 aa12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 TYW1BQ6NUM6 668 aa12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 GOLGA1Q92805 767 aa12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 MASTLQ96GX5 879 aa12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 MTRQ99707 1265 aa12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 RNF26Q9BY78 433 aaPredicted RBP12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 MKNK2Q9HBH9 465 aa12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 LCMT1Q9UIC8 334 aa12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 GUCA1BQ9UMX6 200 aa12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 GDAQ9Y2T3 454 aa12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 MYH13Q9UKX3 1938 aa12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 USP17L3A6NCW0 530 aa12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 USP17L4A6NCW7 530 aa12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 SRGAP2O75044 1071 aa12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 PPFIA2O75334 1257 aa12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 EIF3JO75822 258 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 KCNJ6P48051 423 aa12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 LMBRD2Q68DH5 695 aaPredicted RBP12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 TMTC3Q6ZXV5 915 aa12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 USP17L1Q7RTZ2 530 aa12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 SP8Q8IXZ3 490 aa12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 SMCR8Q8TEV9 937 aaPredicted RBP12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 CAMKK2Q96RR4 588 aa12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 CHP1Q99653 195 aa12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 PCDHGA4Q9Y5G9 962 aa12.91□□□□□ -0.34
CDK5RAP3-231ENST00000584063 NID2Q14112 1375 aa12.9□□□□□ -0.34
CDK5RAP3-231ENST00000584063 CCDC196A0A1B0GTZ2 297 aa12.9□□□□□ -0.34
CDK5RAP3-231ENST00000584063 KIF5CO60282 957 aa12.9□□□□□ -0.34
CDK5RAP3-231ENST00000584063 GYPCP04921 128 aa12.9□□□□□ -0.34
CDK5RAP3-231ENST00000584063 CUL4BQ13620 913 aa12.9□□□□□ -0.34
CDK5RAP3-231ENST00000584063 SLC35G1Q2M3R5 365 aa12.9□□□□□ -0.34
CDK5RAP3-231ENST00000584063 RSRC2Q7L4I2 434 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-231ENST00000584063 TAX1BP1Q86VP1 789 aa12.9□□□□□ -0.34
CDK5RAP3-231ENST00000584063 GPR161Q8N6U8 529 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-231ENST00000584063 CAPZA3Q96KX2 299 aa12.9□□□□□ -0.34
CDK5RAP3-231ENST00000584063 DUOX1Q9NRD9 1551 aa12.9□□□□□ -0.34
CDK5RAP3-231ENST00000584063 ANKRD33BA6NCL7 494 aa12.9□□□□□ -0.34
CDK5RAP3-231ENST00000584063 TRIM66O15016 1216 aa12.9□□□□□ -0.34
CDK5RAP3-231ENST00000584063 GOLGA8HP0CJ92 632 aa12.9□□□□□ -0.34
CDK5RAP3-231ENST00000584063 SETSIPP0DME0 302 aa12.9□□□□□ -0.34
CDK5RAP3-231ENST00000584063 PTK7Q13308 1070 aa12.9□□□□□ -0.34
CDK5RAP3-231ENST00000584063 TSNAXIP1Q2TAA8 658 aa12.9□□□□□ -0.34
CDK5RAP3-231ENST00000584063 TTC38Q5R3I4 469 aa12.9□□□□□ -0.34
CDK5RAP3-231ENST00000584063 APTXQ7Z2E3 356 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-231ENST00000584063 SAPCD2Q86UD0 394 aa12.9□□□□□ -0.34
CDK5RAP3-231ENST00000584063 IQCA1Q86XH1 822 aa12.9□□□□□ -0.34
CDK5RAP3-231ENST00000584063 NOA1Q8NC60 698 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms