RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 FAM47CQ5HY64 1035 aa18.33■□□□□ 0.52
SKA2-209ENST00000583976 MFSD6Q6ZSS7 791 aa18.33■□□□□ 0.52
SKA2-209ENST00000583976 RUFY2Q8WXA3 655 aa18.33■□□□□ 0.52
SKA2-209ENST00000583976 GAS2L1Q99501 681 aaPredicted RBP18.33■□□□□ 0.52
SKA2-209ENST00000583976 MYH6P13533 1939 aa18.32■□□□□ 0.52
SKA2-209ENST00000583976 PTPRSQ13332 1948 aa18.32■□□□□ 0.52
SKA2-209ENST00000583976 CPT1AP50416 773 aa18.32■□□□□ 0.52
SKA2-209ENST00000583976 PDE4DQ08499 809 aa18.32■□□□□ 0.52
SKA2-209ENST00000583976 TTLL4Q14679 1199 aa18.32■□□□□ 0.52
SKA2-209ENST00000583976 UBA5Q9GZZ9 404 aa18.32■□□□□ 0.52
SKA2-209ENST00000583976 MSRAQ9UJ68 235 aa18.32■□□□□ 0.52
SKA2-209ENST00000583976 COL4A4P53420 1690 aaPredicted RBP18.31■□□□□ 0.52
SKA2-209ENST00000583976 ZBBXA8MT70 800 aa18.31■□□□□ 0.52
SKA2-209ENST00000583976 CDC37Q16543 378 aaPredicted RBP18.31■□□□□ 0.52
SKA2-209ENST00000583976 TJAP1Q5JTD0 557 aa18.31■□□□□ 0.52
SKA2-209ENST00000583976 DEFB128Q7Z7B8 93 aa18.31■□□□□ 0.52
SKA2-209ENST00000583976 MTG1Q9BT17 334 aaPredicted RBP18.31■□□□□ 0.52
SKA2-209ENST00000583976 MTIF3Q9H2K0 278 aaKnown RBP18.31■□□□□ 0.52
SKA2-209ENST00000583976 POLR3EQ9NVU0 708 aa18.31■□□□□ 0.52
SKA2-209ENST00000583976 COL20A1Q9P218 1284 aa18.31■□□□□ 0.52
SKA2-209ENST00000583976 TRANK1O15050 2925 aa18.31■□□□□ 0.52
SKA2-209ENST00000583976 B4E1Z4 1266 aa18.3■□□□□ 0.52
SKA2-209ENST00000583976 IGFBP4P22692 258 aa18.3■□□□□ 0.52
SKA2-209ENST00000583976 CCDC85BQ15834 202 aaPredicted RBP18.3■□□□□ 0.52
SKA2-209ENST00000583976 NBPF20Q3BBV1 942 aa18.3■□□□□ 0.52
SKA2-209ENST00000583976 TET1Q8NFU7 2136 aa18.29■□□□□ 0.52
SKA2-209ENST00000583976 KIAA1217Q5T5P2 1943 aa18.29■□□□□ 0.52
SKA2-209ENST00000583976 LOC102724159A0A0B4J2E5 919 aa18.29■□□□□ 0.52
SKA2-209ENST00000583976 SGSM2O43147 1006 aa18.29■□□□□ 0.52
SKA2-209ENST00000583976 KDM4AO75164 1064 aa18.29■□□□□ 0.52
SKA2-209ENST00000583976 CDC45O75419 566 aa18.29■□□□□ 0.52
SKA2-209ENST00000583976 PCP11498 1178 aaKnown RBP18.29■□□□□ 0.52
SKA2-209ENST00000583976 PWP2Q15269 919 aaKnown RBP18.29■□□□□ 0.52
SKA2-209ENST00000583976 PPP2R2DQ66LE6 453 aa18.29■□□□□ 0.52
SKA2-209ENST00000583976 PNMA1Q8ND90 353 aa18.29■□□□□ 0.52
SKA2-209ENST00000583976 SCFD2Q8WU76 684 aa18.29■□□□□ 0.52
SKA2-209ENST00000583976 TBC1D5Q92609 795 aa18.29■□□□□ 0.52
SKA2-209ENST00000583976 ESR2Q92731 530 aa18.29■□□□□ 0.52
SKA2-209ENST00000583976 RNF41Q9H4P4 317 aaPredicted RBP18.29■□□□□ 0.52
SKA2-209ENST00000583976 SLC28A3Q9HAS3 691 aa18.29■□□□□ 0.52
SKA2-209ENST00000583976 THEGQ9P2T0 379 aa18.29■□□□□ 0.52
SKA2-209ENST00000583976 SLC4A7Q9Y6M7 1214 aa18.29■□□□□ 0.52
SKA2-209ENST00000583976 RAD50Q92878 1312 aa18.28■□□□□ 0.52
SKA2-209ENST00000583976 ARHGEF15O94989 841 aa18.28■□□□□ 0.52
SKA2-209ENST00000583976 TXNP10599 105 aaKnown RBP18.28■□□□□ 0.52
SKA2-209ENST00000583976 CHMP4BP1P59074 171 aa18.28■□□□□ 0.52
SKA2-209ENST00000583976 GPATCH4Q5T3I0 446 aaKnown RBP18.28■□□□□ 0.52
SKA2-209ENST00000583976 CASC1Q6TDU7 716 aa18.28■□□□□ 0.52
SKA2-209ENST00000583976 MICALL1Q8N3F8 863 aa18.28■□□□□ 0.52
SKA2-209ENST00000583976 DNERQ8NFT8 737 aa18.28■□□□□ 0.52
SKA2-209ENST00000583976 TTC14Q96N46 770 aa18.28■□□□□ 0.52
SKA2-209ENST00000583976 SEZ6LQ9BYH1 1024 aa18.28■□□□□ 0.52
SKA2-209ENST00000583976 A6NJR5 290 aa18.27■□□□□ 0.52
SKA2-209ENST00000583976 ATP2A2P16615 1042 aaKnown RBP18.27■□□□□ 0.52
SKA2-209ENST00000583976 ENAHQ8N8S7 591 aaPredicted RBP18.27■□□□□ 0.52
SKA2-209ENST00000583976 SYTL5Q8TDW5 730 aaPredicted RBP18.27■□□□□ 0.52
SKA2-209ENST00000583976 ESYT1Q9BSJ8 1104 aa18.27■□□□□ 0.52
SKA2-209ENST00000583976 DSCC1Q9BVC3 393 aa18.27■□□□□ 0.52
SKA2-209ENST00000583976 GPHNQ9NQX3 736 aaPredicted RBP18.27■□□□□ 0.52
SKA2-209ENST00000583976 ZNF213O14771 459 aa18.26■□□□□ 0.51
SKA2-209ENST00000583976 CA3P07451 260 aa18.26■□□□□ 0.51
SKA2-209ENST00000583976 PTH1RQ03431 593 aa18.26■□□□□ 0.51
SKA2-209ENST00000583976 QRICH1Q2TAL8 776 aa18.26■□□□□ 0.51
SKA2-209ENST00000583976 RPUSD2Q8IZ73 545 aaKnown RBP18.26■□□□□ 0.51
SKA2-209ENST00000583976 ADGRF4Q8IZF3 695 aa18.26■□□□□ 0.51
SKA2-209ENST00000583976 AFG1LQ8WV93 481 aa18.26■□□□□ 0.51
SKA2-209ENST00000583976 TAAR1Q96RJ0 339 aa18.26■□□□□ 0.51
SKA2-209ENST00000583976 CTAGE1Q96RT6 745 aa18.26■□□□□ 0.51
SKA2-209ENST00000583976 ABCB11O95342 1321 aa18.25■□□□□ 0.51
SKA2-209ENST00000583976 EPOPA6NHQ4 379 aa18.25■□□□□ 0.51
SKA2-209ENST00000583976 RFXAPO00287 272 aa18.25■□□□□ 0.51
SKA2-209ENST00000583976 NKRFO15226 690 aaKnown RBP eCLIP18.25■□□□□ 0.51
SKA2-209ENST00000583976 PFKMP08237 780 aa18.25■□□□□ 0.51
SKA2-209ENST00000583976 MMP3P08254 477 aa18.25■□□□□ 0.51
SKA2-209ENST00000583976 SUPT20HL2P0C7V6 817 aa18.25■□□□□ 0.51
SKA2-209ENST00000583976 ARHGAP1Q07960 439 aa18.25■□□□□ 0.51
SKA2-209ENST00000583976 LY6KQ17RY6 165 aa18.25■□□□□ 0.51
SKA2-209ENST00000583976 NFRKBQ6P4R8 1299 aa18.25■□□□□ 0.51
SKA2-209ENST00000583976 CCDC62Q6P9F0 684 aa18.25■□□□□ 0.51
SKA2-209ENST00000583976 SEPT14Q6ZU15 432 aa18.25■□□□□ 0.51
SKA2-209ENST00000583976 SPRED2Q7Z698 418 aa18.25■□□□□ 0.51
SKA2-209ENST00000583976 DGKHQ86XP1 1220 aa18.25■□□□□ 0.51
SKA2-209ENST00000583976 SYMPKQ92797 1274 aaKnown RBP18.25■□□□□ 0.51
SKA2-209ENST00000583976 KAT14Q9H8E8 782 aa18.25■□□□□ 0.51
SKA2-209ENST00000583976 CERS4Q9HA82 394 aa18.25■□□□□ 0.51
SKA2-209ENST00000583976 PNMA2Q9UL42 364 aa18.25■□□□□ 0.51
SKA2-209ENST00000583976 PCDHA11Q9Y5I1 949 aa18.25■□□□□ 0.51
SKA2-209ENST00000583976 TRIP12Q14669 1992 aaPredicted RBP18.24■□□□□ 0.51
SKA2-209ENST00000583976 DHX16O60231 1041 aaKnown RBP18.24■□□□□ 0.51
SKA2-209ENST00000583976 EIF2AK2P19525 551 aaKnown RBP18.24■□□□□ 0.51
SKA2-209ENST00000583976 CHST3Q7LGC8 479 aa18.24■□□□□ 0.51
SKA2-209ENST00000583976 IQCA1Q86XH1 822 aa18.24■□□□□ 0.51
SKA2-209ENST00000583976 ZSCAN10Q96SZ4 725 aaPredicted RBP18.24■□□□□ 0.51
SKA2-209ENST00000583976 MPHOSPH6Q99547 160 aaKnown RBP18.24■□□□□ 0.51
SKA2-209ENST00000583976 PRRC2BQ5JSZ5 2229 aaKnown RBP18.23■□□□□ 0.51
SKA2-209ENST00000583976 PITPNM1O00562 1244 aa18.23■□□□□ 0.51
SKA2-209ENST00000583976 OPLAHO14841 1288 aa18.23■□□□□ 0.51
SKA2-209ENST00000583976 IQCF3P0C7M6 154 aa18.23■□□□□ 0.51
SKA2-209ENST00000583976 ASPRV1Q53RT3 343 aa18.23■□□□□ 0.51
SKA2-209ENST00000583976 BRDTQ58F21 947 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms