RNA–Protein interactions for RNA: ENST00000583483.1

CDH8-210, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 380 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-210ENST00000583483 LRRC24Q50LG9 513 aa8.03□□□□□ -1.12
CDH8-210ENST00000583483 CCDC158Q5M9N0 1113 aa8.03□□□□□ -1.12
CDH8-210ENST00000583483 LDHAL6AQ6ZMR3 332 aa8.03□□□□□ -1.12
CDH8-210ENST00000583483 SV2BQ7L1I2 683 aa8.03□□□□□ -1.12
CDH8-210ENST00000583483 PTF1AQ7RTS3 328 aa8.03□□□□□ -1.12
CDH8-210ENST00000583483 FBXO41Q8TF61 875 aa8.03□□□□□ -1.12
CDH8-210ENST00000583483 MPHOSPH8Q99549 860 aa8.03□□□□□ -1.12
CDH8-210ENST00000583483 CEP44Q9C0F1 390 aa8.03□□□□□ -1.12
CDH8-210ENST00000583483 CNNM1Q9NRU3 951 aa8.03□□□□□ -1.12
CDH8-210ENST00000583483 CACNA2D2Q9NY47 1150 aa8.03□□□□□ -1.12
CDH8-210ENST00000583483 RIPOR2Q9Y4F9 1068 aa8.03□□□□□ -1.12
CDH8-210ENST00000583483 CCDC171Q6TFL3 1326 aa8.03□□□□□ -1.12
CDH8-210ENST00000583483 ZFYP08048 801 aaPredicted RBP8.02□□□□□ -1.13
CDH8-210ENST00000583483 UQCRFS1P1P0C7P4 283 aa8.02□□□□□ -1.13
CDH8-210ENST00000583483 SLC5A1P13866 664 aa8.02□□□□□ -1.13
CDH8-210ENST00000583483 AP3B2Q13367 1082 aa8.02□□□□□ -1.13
CDH8-210ENST00000583483 CCDC85BQ15834 202 aaPredicted RBP8.02□□□□□ -1.13
CDH8-210ENST00000583483 MAP3K11Q16584 847 aa8.02□□□□□ -1.13
CDH8-210ENST00000583483 NBPF5PQ86XG9 351 aaPredicted RBP8.02□□□□□ -1.13
CDH8-210ENST00000583483 ARMC10Q8N2F6 343 aa8.02□□□□□ -1.13
CDH8-210ENST00000583483 KBTBD3Q8NAB2 608 aa8.02□□□□□ -1.13
CDH8-210ENST00000583483 SMG8Q8ND04 991 aaKnown RBP8.02□□□□□ -1.13
CDH8-210ENST00000583483 FLAD1Q8NFF5 587 aa8.02□□□□□ -1.13
CDH8-210ENST00000583483 LPIN2Q92539 896 aa8.02□□□□□ -1.13
CDH8-210ENST00000583483 KIF2CQ99661 725 aa8.02□□□□□ -1.13
CDH8-210ENST00000583483 CORO1BQ9BR76 489 aa8.02□□□□□ -1.13
CDH8-210ENST00000583483 PAG1Q9NWQ8 432 aa8.02□□□□□ -1.13
CDH8-210ENST00000583483 PPP1R9AQ9ULJ8 1098 aa8.02□□□□□ -1.13
CDH8-210ENST00000583483 ANKRD31Q8N7Z5 1873 aa8.02□□□□□ -1.13
CDH8-210ENST00000583483 LTBP1Q14766 1721 aa8.01□□□□□ -1.13
CDH8-210ENST00000583483 TRIM37O94972 964 aa8.01□□□□□ -1.13
CDH8-210ENST00000583483 PDE8BO95263 885 aa8.01□□□□□ -1.13
CDH8-210ENST00000583483 TIAF1O95411 115 aa8.01□□□□□ -1.13
CDH8-210ENST00000583483 IFIT1P09914 478 aaKnown RBP8.01□□□□□ -1.13
CDH8-210ENST00000583483 HCLS1P14317 486 aaPredicted RBP8.01□□□□□ -1.13
CDH8-210ENST00000583483 GLB1P16278 677 aa8.01□□□□□ -1.13
CDH8-210ENST00000583483 FGFR2P21802 821 aa8.01□□□□□ -1.13
CDH8-210ENST00000583483 HSPA4P34932 840 aa8.01□□□□□ -1.13
CDH8-210ENST00000583483 PREPP48147 710 aa8.01□□□□□ -1.13
CDH8-210ENST00000583483 ST13P50502 369 aaKnown RBP8.01□□□□□ -1.13
CDH8-210ENST00000583483 TTF1Q15361 905 aaPredicted RBP8.01□□□□□ -1.13
CDH8-210ENST00000583483 TTC39AQ5SRH9 613 aa8.01□□□□□ -1.13
CDH8-210ENST00000583483 GORABQ5T7V8 394 aa8.01□□□□□ -1.13
CDH8-210ENST00000583483 PCNX4Q63HM2 1172 aa8.01□□□□□ -1.13
CDH8-210ENST00000583483 TBC1D9BQ66K14 1250 aa8.01□□□□□ -1.13
CDH8-210ENST00000583483 ANKRD18AQ8IVF6 992 aa8.01□□□□□ -1.13
CDH8-210ENST00000583483 CRELD1Q96HD1 420 aa8.01□□□□□ -1.13
CDH8-210ENST00000583483 FAM46AQ96IP4 442 aaKnown RBP8.01□□□□□ -1.13
CDH8-210ENST00000583483 PUS3Q9BZE2 481 aaKnown RBP8.01□□□□□ -1.13
CDH8-210ENST00000583483 LSG1Q9H089 658 aaKnown RBP8.01□□□□□ -1.13
CDH8-210ENST00000583483 RNF208Q9H0X6 261 aa8.01□□□□□ -1.13
CDH8-210ENST00000583483 BOLA2Q9H3K6 86 aa8.01□□□□□ -1.13
CDH8-210ENST00000583483 HMG20BQ9P0W2 317 aa8.01□□□□□ -1.13
CDH8-210ENST00000583483 PCDHB5Q9Y5E4 795 aa8.01□□□□□ -1.13
CDH8-210ENST00000583483 CHD4Q14839 1912 aa8.01□□□□□ -1.13
CDH8-210ENST00000583483 PDS5AQ29RF7 1337 aaKnown RBP8.01□□□□□ -1.13
CDH8-210ENST00000583483 TIAM2Q8IVF5 1701 aa8□□□□□ -1.13
CDH8-210ENST00000583483 CCDC88AQ3V6T2 1871 aa8□□□□□ -1.13
CDH8-210ENST00000583483 COL4A1P02462 1669 aa8□□□□□ -1.13
CDH8-210ENST00000583483 K7ELQ4 463 aaPredicted RBP8□□□□□ -1.13
CDH8-210ENST00000583483 IGSF3O75054 1194 aa8□□□□□ -1.13
CDH8-210ENST00000583483 AOC2O75106 756 aa8□□□□□ -1.13
CDH8-210ENST00000583483 ST5P78524 1137 aa8□□□□□ -1.13
CDH8-210ENST00000583483 TXNRD1Q16881 649 aa8□□□□□ -1.13
CDH8-210ENST00000583483 MAP1SQ66K74 1059 aaPredicted RBP8□□□□□ -1.13
CDH8-210ENST00000583483 TMED8Q6PL24 325 aaPredicted RBP8□□□□□ -1.13
CDH8-210ENST00000583483 CWC27Q6UX04 472 aaKnown RBP8□□□□□ -1.13
CDH8-210ENST00000583483 SYNE4Q8N205 404 aa8□□□□□ -1.13
CDH8-210ENST00000583483 C12orf50Q8NA57 414 aaPredicted RBP8□□□□□ -1.13
CDH8-210ENST00000583483 CNBD1Q8NA66 436 aa8□□□□□ -1.13
CDH8-210ENST00000583483 KCNB2Q92953 911 aa8□□□□□ -1.13
CDH8-210ENST00000583483 NEUROD6Q96NK8 337 aa8□□□□□ -1.13
CDH8-210ENST00000583483 DNAJC2Q99543 621 aaKnown RBP8□□□□□ -1.13
CDH8-210ENST00000583483 WDR18Q9BV38 432 aa8□□□□□ -1.13
CDH8-210ENST00000583483 DDX24Q9GZR7 859 aaKnown RBP eCLIP8□□□□□ -1.13
CDH8-210ENST00000583483 SUGCTQ9HAC7 445 aa8□□□□□ -1.13
CDH8-210ENST00000583483 HELLSQ9NRZ9 838 aa8□□□□□ -1.13
CDH8-210ENST00000583483 BSDC1Q9NW68 430 aaPredicted RBP8□□□□□ -1.13
CDH8-210ENST00000583483 SRP68Q9UHB9 627 aaKnown RBP8□□□□□ -1.13
CDH8-210ENST00000583483 TLR6Q9Y2C9 796 aa8□□□□□ -1.13
CDH8-210ENST00000583483 COL11A2P13942 1736 aaPredicted RBP8□□□□□ -1.13
CDH8-210ENST00000583483 TAF1P21675 1872 aa8□□□□□ -1.13
CDH8-210ENST00000583483 DLEC1Q9Y238 1755 aa7.99□□□□□ -1.13
CDH8-210ENST00000583483 RPAP1Q9BWH6 1393 aaPredicted RBP7.99□□□□□ -1.13
CDH8-210ENST00000583483 A0A0D9SFI3 127 aa7.99□□□□□ -1.13
CDH8-210ENST00000583483 MAP4K4O95819 1239 aaPredicted RBP7.99□□□□□ -1.13
CDH8-210ENST00000583483 ZKSCAN1P17029 563 aaPredicted RBP7.99□□□□□ -1.13
CDH8-210ENST00000583483 NMIQ13287 307 aaPredicted RBP7.99□□□□□ -1.13
CDH8-210ENST00000583483 UBE4AQ14139 1066 aa7.99□□□□□ -1.13
CDH8-210ENST00000583483 NKAPLQ5M9Q1 402 aa7.99□□□□□ -1.13
CDH8-210ENST00000583483 TTBK2Q6IQ55 1244 aa7.99□□□□□ -1.13
CDH8-210ENST00000583483 ZSCAN25Q6NSZ9 544 aa7.99□□□□□ -1.13
CDH8-210ENST00000583483 C2CD4AQ8NCU7 369 aaPredicted RBP7.99□□□□□ -1.13
CDH8-210ENST00000583483 GPBAR1Q8TDU6 330 aa7.99□□□□□ -1.13
CDH8-210ENST00000583483 MRRFQ96E11 262 aaKnown RBP7.99□□□□□ -1.13
CDH8-210ENST00000583483 TM6SF1Q9BZW5 370 aa7.99□□□□□ -1.13
CDH8-210ENST00000583483 CBX8Q9HC52 389 aa7.99□□□□□ -1.13
CDH8-210ENST00000583483 MYO5AQ9Y4I1 1855 aaKnown RBP7.99□□□□□ -1.13
CDH8-210ENST00000583483 PCDHGC5Q9Y5F6 944 aa7.99□□□□□ -1.13
CDH8-210ENST00000583483 ZNF804BA4D1E1 1349 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms