RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 SPRED2Q7Z698 418 aa9.08□□□□□ -0.96
CCDC47-205ENST00000582331 ITPRIPQ8IWB1 547 aa9.08□□□□□ -0.96
CCDC47-205ENST00000582331 FBXO16Q8IX29 292 aaPredicted RBP9.08□□□□□ -0.96
CCDC47-205ENST00000582331 RPAP2Q8IXW5 612 aaPredicted RBP9.08□□□□□ -0.96
CCDC47-205ENST00000582331 ZNF444Q8N0Y2 327 aaPredicted RBP9.08□□□□□ -0.96
CCDC47-205ENST00000582331 GMCL1P1Q8NEA9 526 aa9.08□□□□□ -0.96
CCDC47-205ENST00000582331 TRERF1Q96PN7 1200 aa9.08□□□□□ -0.96
CCDC47-205ENST00000582331 MTG1Q9BT17 334 aaPredicted RBP9.08□□□□□ -0.96
CCDC47-205ENST00000582331 ZBED2Q9BTP6 218 aa9.08□□□□□ -0.96
CCDC47-205ENST00000582331 BCL11AQ9H165 835 aa9.08□□□□□ -0.96
CCDC47-205ENST00000582331 KCNH6Q9H252 994 aa9.08□□□□□ -0.96
CCDC47-205ENST00000582331 BOLA2Q9H3K6 86 aa9.08□□□□□ -0.96
CCDC47-205ENST00000582331 VTA1Q9NP79 307 aa9.08□□□□□ -0.96
CCDC47-205ENST00000582331 SYNPO2Q9UMS6 1093 aa9.08□□□□□ -0.96
CCDC47-205ENST00000582331 DDX49Q9Y6V7 483 aaKnown RBP9.08□□□□□ -0.96
CCDC47-205ENST00000582331 ZNF536O15090 1300 aa9.07□□□□□ -0.96
CCDC47-205ENST00000582331 IGKV6D-41A0A0C4DH26 115 aa9.07□□□□□ -0.96
CCDC47-205ENST00000582331 LCHNA4D1U4 455 aa9.07□□□□□ -0.96
CCDC47-205ENST00000582331 TMEM232C9JQI7 657 aa9.07□□□□□ -0.96
CCDC47-205ENST00000582331 CHGBP05060 677 aa9.07□□□□□ -0.96
CCDC47-205ENST00000582331 ALAS1P13196 640 aa9.07□□□□□ -0.96
CCDC47-205ENST00000582331 KCNA5P22460 613 aa9.07□□□□□ -0.96
CCDC47-205ENST00000582331 PURAQ00577 322 aaKnown RBP9.07□□□□□ -0.96
CCDC47-205ENST00000582331 NBPF20Q3BBV1 942 aa9.07□□□□□ -0.96
CCDC47-205ENST00000582331 ZSCAN25Q6NSZ9 544 aa9.07□□□□□ -0.96
CCDC47-205ENST00000582331 FAM160B2Q86V87 743 aa9.07□□□□□ -0.96
CCDC47-205ENST00000582331 FTSJ3Q8IY81 847 aaKnown RBP9.07□□□□□ -0.96
CCDC47-205ENST00000582331 LRRC47Q8N1G4 583 aaKnown RBP9.07□□□□□ -0.96
CCDC47-205ENST00000582331 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.07□□□□□ -0.96
CCDC47-205ENST00000582331 GDPD5Q8WTR4 605 aa9.07□□□□□ -0.96
CCDC47-205ENST00000582331 CHURC1Q8WUH1 139 aa9.07□□□□□ -0.96
CCDC47-205ENST00000582331 KIF1BPQ96EK5 621 aa9.07□□□□□ -0.96
CCDC47-205ENST00000582331 CEP95Q96GE4 821 aa9.07□□□□□ -0.96
CCDC47-205ENST00000582331 DDX27Q96GQ7 796 aaKnown RBP9.07□□□□□ -0.96
CCDC47-205ENST00000582331 FBXL18Q96ME1 805 aa9.07□□□□□ -0.96
CCDC47-205ENST00000582331 LARP6Q9BRS8 491 aaKnown RBP9.07□□□□□ -0.96
CCDC47-205ENST00000582331 WDR11Q9BZH6 1224 aa9.07□□□□□ -0.96
CCDC47-205ENST00000582331 SUGCTQ9HAC7 445 aa9.07□□□□□ -0.96
CCDC47-205ENST00000582331 MTMR4Q9NYA4 1195 aa9.07□□□□□ -0.96
CCDC47-205ENST00000582331 ISY1Q9ULR0 285 aaKnown RBP9.07□□□□□ -0.96
CCDC47-205ENST00000582331 SCN5AQ14524 2016 aa9.07□□□□□ -0.96
CCDC47-205ENST00000582331 MUC6Q6W4X9 2439 aa9.06□□□□□ -0.96
CCDC47-205ENST00000582331 PIEZO1Q92508 2521 aa9.06□□□□□ -0.96
CCDC47-205ENST00000582331 GREB1LQ9C091 1923 aaPredicted RBP9.06□□□□□ -0.96
CCDC47-205ENST00000582331 GRXCR2A6NFK2 248 aa9.06□□□□□ -0.96
CCDC47-205ENST00000582331 KPNA6O60684 536 aa9.06□□□□□ -0.96
CCDC47-205ENST00000582331 TTLL1O95922 423 aa9.06□□□□□ -0.96
CCDC47-205ENST00000582331 IL9P15248 144 aa9.06□□□□□ -0.96
CCDC47-205ENST00000582331 ATP5JP18859 108 aa9.06□□□□□ -0.96
CCDC47-205ENST00000582331 STAT2P52630 851 aa9.06□□□□□ -0.96
CCDC47-205ENST00000582331 ERVK-21P61565 698 aa9.06□□□□□ -0.96
CCDC47-205ENST00000582331 PTPN11Q06124 597 aaPredicted RBP9.06□□□□□ -0.96
CCDC47-205ENST00000582331 IKQ13123 557 aaPredicted RBP9.06□□□□□ -0.96
CCDC47-205ENST00000582331 LRRFIP1Q32MZ4 808 aaKnown RBP9.06□□□□□ -0.96
CCDC47-205ENST00000582331 PUS10Q3MIT2 529 aaKnown RBP9.06□□□□□ -0.96
CCDC47-205ENST00000582331 BRDTQ58F21 947 aaPredicted RBP9.06□□□□□ -0.96
CCDC47-205ENST00000582331 PTCRAQ6ISU1 281 aaPredicted RBP9.06□□□□□ -0.96
CCDC47-205ENST00000582331 NFRKBQ6P4R8 1299 aa9.06□□□□□ -0.96
CCDC47-205ENST00000582331 GIMAP6Q6P9H5 292 aa9.06□□□□□ -0.96
CCDC47-205ENST00000582331 OR6J1Q8NGC5 347 aa9.06□□□□□ -0.96
CCDC47-205ENST00000582331 MORC4Q8TE76 937 aa9.06□□□□□ -0.96
CCDC47-205ENST00000582331 STAG1Q8WVM7 1258 aa9.06□□□□□ -0.96
CCDC47-205ENST00000582331 TGS1Q96RS0 853 aaKnown RBP9.06□□□□□ -0.96
CCDC47-205ENST00000582331 HAUS7Q99871 368 aa9.06□□□□□ -0.96
CCDC47-205ENST00000582331 PUS7LQ9H0K6 701 aaKnown RBP9.06□□□□□ -0.96
CCDC47-205ENST00000582331 ZNF287Q9HBT7 754 aa9.06□□□□□ -0.96
CCDC47-205ENST00000582331 CYP39A1Q9NYL5 469 aa9.06□□□□□ -0.96
CCDC47-205ENST00000582331 MTUS1Q9ULD2 1270 aa9.06□□□□□ -0.96
CCDC47-205ENST00000582331 NOD1Q9Y239 953 aa9.06□□□□□ -0.96
CCDC47-205ENST00000582331 GSG1L2A8MUP6 293 aa9.05□□□□□ -0.96
CCDC47-205ENST00000582331 ARHGAP33O14559 1287 aa9.05□□□□□ -0.96
CCDC47-205ENST00000582331 DCXO43602 365 aa9.05□□□□□ -0.96
CCDC47-205ENST00000582331 WDR5P61964 334 aaKnown RBP9.05□□□□□ -0.96
CCDC47-205ENST00000582331 MFSD10Q14728 455 aa9.05□□□□□ -0.96
CCDC47-205ENST00000582331 MUM1L1Q5H9M0 696 aa9.05□□□□□ -0.96
CCDC47-205ENST00000582331 PPP4R3BQ5MIZ7 849 aa9.05□□□□□ -0.96
CCDC47-205ENST00000582331 NSMFQ6X4W1 530 aa9.05□□□□□ -0.96
CCDC47-205ENST00000582331 TMCO2Q7Z6W1 182 aaPredicted RBP9.05□□□□□ -0.96
CCDC47-205ENST00000582331 CCDC155Q8N6L0 562 aa9.05□□□□□ -0.96
CCDC47-205ENST00000582331 PPP1R13LQ8WUF5 828 aa9.05□□□□□ -0.96
CCDC47-205ENST00000582331 PURBQ96QR8 312 aaKnown RBP9.05□□□□□ -0.96
CCDC47-205ENST00000582331 STRBPQ96SI9 672 aaKnown RBP9.05□□□□□ -0.96
CCDC47-205ENST00000582331 CRBNQ96SW2 442 aa9.05□□□□□ -0.96
CCDC47-205ENST00000582331 RAD9AQ99638 391 aa9.05□□□□□ -0.96
CCDC47-205ENST00000582331 ADD3Q9UEY8 706 aaKnown RBP9.05□□□□□ -0.96
CCDC47-205ENST00000582331 WDFY4Q6ZS81 3184 aa9.05□□□□□ -0.96
CCDC47-205ENST00000582331 RAD50Q92878 1312 aa9.05□□□□□ -0.96
CCDC47-205ENST00000582331 COL4A4P53420 1690 aaPredicted RBP9.04□□□□□ -0.96
CCDC47-205ENST00000582331 MYH4Q9Y623 1939 aa9.04□□□□□ -0.96
CCDC47-205ENST00000582331 RBM47A0AV96 593 aaKnown RBP9.04□□□□□ -0.96
CCDC47-205ENST00000582331 PLA2G6O60733 806 aa9.04□□□□□ -0.96
CCDC47-205ENST00000582331 PRDM1O75626 825 aa9.04□□□□□ -0.96
CCDC47-205ENST00000582331 GJB5O95377 273 aa9.04□□□□□ -0.96
CCDC47-205ENST00000582331 TSPY3P0CV98 308 aa9.04□□□□□ -0.96
CCDC47-205ENST00000582331 TSPY8P0CW00 308 aa9.04□□□□□ -0.96
CCDC47-205ENST00000582331 RLBP1P12271 317 aa9.04□□□□□ -0.96
CCDC47-205ENST00000582331 ALDH5A1P51649 535 aaPredicted RBP9.04□□□□□ -0.96
CCDC47-205ENST00000582331 SNAP25P60880 206 aa9.04□□□□□ -0.96
CCDC47-205ENST00000582331 DEFB103AP81534 67 aa9.04□□□□□ -0.96
CCDC47-205ENST00000582331 PTGISQ16647 500 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms