RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 TSKSQ9UJT2 592 aa10.9□□□□□ -0.66
RFFL-210ENST00000582308 IVNS1ABPQ9Y6Y0 642 aa10.9□□□□□ -0.66
RFFL-210ENST00000582308 LRRC37A2A6NM11 1700 aa10.89□□□□□ -0.67
RFFL-210ENST00000582308 FRMPD4Q14CM0 1322 aa10.89□□□□□ -0.67
RFFL-210ENST00000582308 RPTORQ8N122 1335 aa10.89□□□□□ -0.67
RFFL-210ENST00000582308 CCDC194A0A1B0GVG4 234 aa10.89□□□□□ -0.67
RFFL-210ENST00000582308 SOWAHBA6NEL2 793 aa10.89□□□□□ -0.67
RFFL-210ENST00000582308 SLC15A5A6NIM6 579 aa10.89□□□□□ -0.67
RFFL-210ENST00000582308 SPDYE3A6NKU9 549 aa10.89□□□□□ -0.67
RFFL-210ENST00000582308 WNT7AO00755 349 aa10.89□□□□□ -0.67
RFFL-210ENST00000582308 SREBF1P36956 1147 aa10.89□□□□□ -0.67
RFFL-210ENST00000582308 PSMC4P43686 418 aa10.89□□□□□ -0.67
RFFL-210ENST00000582308 TOB1P50616 345 aaPredicted RBP10.89□□□□□ -0.67
RFFL-210ENST00000582308 NONOQ15233 471 aaKnown RBP eCLIP10.89□□□□□ -0.67
RFFL-210ENST00000582308 INF2Q27J81 1249 aa10.89□□□□□ -0.67
RFFL-210ENST00000582308 MCTP2Q6DN12 878 aa10.89□□□□□ -0.67
RFFL-210ENST00000582308 BRAPQ7Z569 592 aa10.89□□□□□ -0.67
RFFL-210ENST00000582308 JMYQ8N9B5 988 aa10.89□□□□□ -0.67
RFFL-210ENST00000582308 IL31RAQ8NI17 732 aa10.89□□□□□ -0.67
RFFL-210ENST00000582308 TBCKQ8TEA7 893 aa10.89□□□□□ -0.67
RFFL-210ENST00000582308 CRYGNQ8WXF5 182 aa10.89□□□□□ -0.67
RFFL-210ENST00000582308 USP6NLQ92738 828 aa10.89□□□□□ -0.67
RFFL-210ENST00000582308 RMDN3Q96TC7 470 aa10.89□□□□□ -0.67
RFFL-210ENST00000582308 BEGAINQ9BUH8 593 aa10.89□□□□□ -0.67
RFFL-210ENST00000582308 ZSCAN16Q9H4T2 348 aaPredicted RBP10.89□□□□□ -0.67
RFFL-210ENST00000582308 PXMP2Q9NR77 195 aa10.89□□□□□ -0.67
RFFL-210ENST00000582308 GJD2Q9UKL4 321 aa10.89□□□□□ -0.67
RFFL-210ENST00000582308 FKTNO75072 461 aa10.88□□□□□ -0.67
RFFL-210ENST00000582308 FCGRTP55899 365 aa10.88□□□□□ -0.67
RFFL-210ENST00000582308 UBXN2AP68543 259 aa10.88□□□□□ -0.67
RFFL-210ENST00000582308 ZNF792Q3KQV3 632 aa10.88□□□□□ -0.67
RFFL-210ENST00000582308 FOXD4L6Q3SYB3 417 aaPredicted RBP10.88□□□□□ -0.67
RFFL-210ENST00000582308 MYSM1Q5VVJ2 828 aa10.88□□□□□ -0.67
RFFL-210ENST00000582308 FOXD4L3Q6VB84 417 aaPredicted RBP10.88□□□□□ -0.67
RFFL-210ENST00000582308 CD99L2Q8TCZ2 262 aa10.88□□□□□ -0.67
RFFL-210ENST00000582308 ZNF296Q8WUU4 475 aaPredicted RBP10.88□□□□□ -0.67
RFFL-210ENST00000582308 CHAMP1Q96JM3 812 aa10.88□□□□□ -0.67
RFFL-210ENST00000582308 DOCK5Q9H7D0 1870 aa10.88□□□□□ -0.67
RFFL-210ENST00000582308 DDX49Q9Y6V7 483 aaKnown RBP10.88□□□□□ -0.67
RFFL-210ENST00000582308 TNPO2O14787 897 aaKnown RBP10.87□□□□□ -0.67
RFFL-210ENST00000582308 CYP3A4P08684 503 aa10.87□□□□□ -0.67
RFFL-210ENST00000582308 EIF2AK2P19525 551 aaKnown RBP10.87□□□□□ -0.67
RFFL-210ENST00000582308 ATP2B1P20020 1258 aa10.87□□□□□ -0.67
RFFL-210ENST00000582308 ALDH5A1P51649 535 aaPredicted RBP10.87□□□□□ -0.67
RFFL-210ENST00000582308 USP11P51784 963 aa10.87□□□□□ -0.67
RFFL-210ENST00000582308 ARHGAP4P98171 946 aa10.87□□□□□ -0.67
RFFL-210ENST00000582308 MAP2K5Q13163 448 aa10.87□□□□□ -0.67
RFFL-210ENST00000582308 NBR1Q14596 966 aa10.87□□□□□ -0.67
RFFL-210ENST00000582308 PGM5Q15124 567 aa10.87□□□□□ -0.67
RFFL-210ENST00000582308 ARHGEF16Q5VV41 709 aa10.87□□□□□ -0.67
RFFL-210ENST00000582308 DNERQ8NFT8 737 aa10.87□□□□□ -0.67
RFFL-210ENST00000582308 NPLOC4Q8TAT6 608 aa10.87□□□□□ -0.67
RFFL-210ENST00000582308 NSUN6Q8TEA1 469 aaKnown RBP10.87□□□□□ -0.67
RFFL-210ENST00000582308 PDCD2LQ9BRP1 358 aa10.87□□□□□ -0.67
RFFL-210ENST00000582308 GABRQQ9UN88 632 aa10.87□□□□□ -0.67
RFFL-210ENST00000582308 WDR81Q562E7 1941 aa10.86□□□□□ -0.67
RFFL-210ENST00000582308 NR3C2P08235 984 aa10.86□□□□□ -0.67
RFFL-210ENST00000582308 HOXC6P09630 235 aa10.86□□□□□ -0.67
RFFL-210ENST00000582308 EDNRBP24530 442 aa10.86□□□□□ -0.67
RFFL-210ENST00000582308 TRAPPC10P48553 1259 aa10.86□□□□□ -0.67
RFFL-210ENST00000582308 MRPS9P82933 396 aaKnown RBP10.86□□□□□ -0.67
RFFL-210ENST00000582308 KIF22Q14807 665 aa10.86□□□□□ -0.67
RFFL-210ENST00000582308 RILPL1Q5EBL4 403 aa10.86□□□□□ -0.67
RFFL-210ENST00000582308 PCNX4Q63HM2 1172 aa10.86□□□□□ -0.67
RFFL-210ENST00000582308 NEK8Q86SG6 692 aa10.86□□□□□ -0.67
RFFL-210ENST00000582308 DPP9Q86TI2 863 aa10.86□□□□□ -0.67
RFFL-210ENST00000582308 VSIG10LQ86VR7 867 aa10.86□□□□□ -0.67
RFFL-210ENST00000582308 SOCS4Q8WXH5 440 aa10.86□□□□□ -0.67
RFFL-210ENST00000582308 TNPO1Q92973 898 aaKnown RBP10.86□□□□□ -0.67
RFFL-210ENST00000582308 ERO1AQ96HE7 468 aa10.86□□□□□ -0.67
RFFL-210ENST00000582308 ZFP91Q96JP5 570 aaPredicted RBP10.86□□□□□ -0.67
RFFL-210ENST00000582308 IWS1Q96ST2 819 aa10.86□□□□□ -0.67
RFFL-210ENST00000582308 NUDT12Q9BQG2 462 aa10.86□□□□□ -0.67
RFFL-210ENST00000582308 FTOQ9C0B1 505 aaKnown RBP eCLIP10.86□□□□□ -0.67
RFFL-210ENST00000582308 EHMT1Q9H9B1 1298 aa10.86□□□□□ -0.67
RFFL-210ENST00000582308 TFIP11Q9UBB9 837 aaKnown RBP10.86□□□□□ -0.67
RFFL-210ENST00000582308 ADD3Q9UEY8 706 aaKnown RBP10.86□□□□□ -0.67
RFFL-210ENST00000582308 NOL7Q9UMY1 257 aaKnown RBP10.86□□□□□ -0.67
RFFL-210ENST00000582308 DIS3Q9Y2L1 958 aaKnown RBP10.86□□□□□ -0.67
RFFL-210ENST00000582308 PCDHB6Q9Y5E3 794 aa10.86□□□□□ -0.67
RFFL-210ENST00000582308 CYP3A7-CYP3A51PA0A087WV96 503 aa10.85□□□□□ -0.67
RFFL-210ENST00000582308 FAM86B1E9PN63 330 aa10.85□□□□□ -0.67
RFFL-210ENST00000582308 TDP2O95551 362 aa10.85□□□□□ -0.67
RFFL-210ENST00000582308 FAM86B2P0C5J1 330 aa10.85□□□□□ -0.67
RFFL-210ENST00000582308 MYCLP12524 364 aaPredicted RBP10.85□□□□□ -0.67
RFFL-210ENST00000582308 CYP2B6P20813 491 aa10.85□□□□□ -0.67
RFFL-210ENST00000582308 CYP3A7P24462 503 aa10.85□□□□□ -0.67
RFFL-210ENST00000582308 CCND2P30279 289 aa10.85□□□□□ -0.67
RFFL-210ENST00000582308 CIITAP33076 1130 aa10.85□□□□□ -0.67
RFFL-210ENST00000582308 RGS2P41220 211 aa10.85□□□□□ -0.67
RFFL-210ENST00000582308 DNM1Q05193 864 aaKnown RBP10.85□□□□□ -0.67
RFFL-210ENST00000582308 ZNF174Q15697 407 aa10.85□□□□□ -0.67
RFFL-210ENST00000582308 LETM2Q2VYF4 491 aa10.85□□□□□ -0.67
RFFL-210ENST00000582308 TTC38Q5R3I4 469 aa10.85□□□□□ -0.67
RFFL-210ENST00000582308 ZNF467Q7Z7K2 595 aaPredicted RBP10.85□□□□□ -0.67
RFFL-210ENST00000582308 CYP2W1Q8TAV3 490 aa10.85□□□□□ -0.67
RFFL-210ENST00000582308 MORC4Q8TE76 937 aa10.85□□□□□ -0.67
RFFL-210ENST00000582308 MAML3Q96JK9 1138 aa10.85□□□□□ -0.67
RFFL-210ENST00000582308 MBOAT7Q96N66 472 aa10.85□□□□□ -0.67
RFFL-210ENST00000582308 USP28Q96RU2 1077 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms