RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 VSIG10LQ86VR7 867 aa14.59□□□□□ -0.07
SNORD55-201ENST00000581525 ZNF713Q8N859 430 aaPredicted RBP14.59□□□□□ -0.07
SNORD55-201ENST00000581525 PDCD2LQ9BRP1 358 aa14.59□□□□□ -0.07
SNORD55-201ENST00000581525 SEC63Q9UGP8 760 aaKnown RBP14.59□□□□□ -0.07
SNORD55-201ENST00000581525 DDX49Q9Y6V7 483 aaKnown RBP14.59□□□□□ -0.07
SNORD55-201ENST00000581525 SYNRGQ9UMZ2 1314 aa14.59□□□□□ -0.07
SNORD55-201ENST00000581525 FRMPD3Q5JV73 1810 aa14.59□□□□□ -0.07
SNORD55-201ENST00000581525 NKRFO15226 690 aaKnown RBP eCLIP14.58□□□□□ -0.08
SNORD55-201ENST00000581525 PRPF3O43395 683 aaKnown RBP14.58□□□□□ -0.08
SNORD55-201ENST00000581525 PGK1P00558 417 aa14.58□□□□□ -0.08
SNORD55-201ENST00000581525 NR3C2P08235 984 aa14.58□□□□□ -0.08
SNORD55-201ENST00000581525 IFNAR1P17181 557 aa14.58□□□□□ -0.08
SNORD55-201ENST00000581525 SMPD1P17405 629 aa14.58□□□□□ -0.08
SNORD55-201ENST00000581525 ADCYAP1R1P41586 468 aa14.58□□□□□ -0.08
SNORD55-201ENST00000581525 METAP2P50579 478 aaKnown RBP eCLIP14.58□□□□□ -0.08
SNORD55-201ENST00000581525 FGD1P98174 961 aa14.58□□□□□ -0.08
SNORD55-201ENST00000581525 PDE4DQ08499 809 aa14.58□□□□□ -0.08
SNORD55-201ENST00000581525 STXBP2Q15833 593 aa14.58□□□□□ -0.08
SNORD55-201ENST00000581525 GJC2Q5T442 439 aaPredicted RBP14.58□□□□□ -0.08
SNORD55-201ENST00000581525 RAB11FIP4Q86YS3 637 aa14.58□□□□□ -0.08
SNORD55-201ENST00000581525 V9GY48 417 aaPredicted RBP14.58□□□□□ -0.08
SNORD55-201ENST00000581525 MCM3APO60318 1980 aa14.57□□□□□ -0.08
SNORD55-201ENST00000581525 MOXD2PA6NHM9 499 aa14.57□□□□□ -0.08
SNORD55-201ENST00000581525 KBTBD13C9JR72 458 aa14.57□□□□□ -0.08
SNORD55-201ENST00000581525 EIF3JO75822 258 aaKnown RBP14.57□□□□□ -0.08
SNORD55-201ENST00000581525 PKN1Q16512 942 aa14.57□□□□□ -0.08
SNORD55-201ENST00000581525 PPP1R18Q6NYC8 613 aa14.57□□□□□ -0.08
SNORD55-201ENST00000581525 FBXO16Q8IX29 292 aaPredicted RBP14.57□□□□□ -0.08
SNORD55-201ENST00000581525 CCDC82Q8N4S0 544 aa14.57□□□□□ -0.08
SNORD55-201ENST00000581525 SCFD2Q8WU76 684 aa14.57□□□□□ -0.08
SNORD55-201ENST00000581525 UPF3BQ9BZI7 483 aaKnown RBP14.57□□□□□ -0.08
SNORD55-201ENST00000581525 PDRG1Q9NUG6 133 aa14.57□□□□□ -0.08
SNORD55-201ENST00000581525 BARHL2Q9NY43 387 aa14.57□□□□□ -0.08
SNORD55-201ENST00000581525 RBM27Q9P2N5 1060 aaKnown RBP14.57□□□□□ -0.08
SNORD55-201ENST00000581525 LRRC37A2A6NM11 1700 aa14.57□□□□□ -0.08
SNORD55-201ENST00000581525 MYH6P13533 1939 aa14.56□□□□□ -0.08
SNORD55-201ENST00000581525 STAM2O75886 525 aa14.56□□□□□ -0.08
SNORD55-201ENST00000581525 RGS20O76081 388 aa14.56□□□□□ -0.08
SNORD55-201ENST00000581525 HOXA13P31271 388 aaPredicted RBP14.56□□□□□ -0.08
SNORD55-201ENST00000581525 PGM5Q15124 567 aa14.56□□□□□ -0.08
SNORD55-201ENST00000581525 KCNA10Q16322 511 aa14.56□□□□□ -0.08
SNORD55-201ENST00000581525 PFKFB3Q16875 520 aaPredicted RBP14.56□□□□□ -0.08
SNORD55-201ENST00000581525 LRRC26Q2I0M4 334 aa14.56□□□□□ -0.08
SNORD55-201ENST00000581525 TMEM63BQ5T3F8 832 aa14.56□□□□□ -0.08
SNORD55-201ENST00000581525 PRPF38BQ5VTL8 546 aaKnown RBP14.56□□□□□ -0.08
SNORD55-201ENST00000581525 ARHGEF16Q5VV41 709 aa14.56□□□□□ -0.08
SNORD55-201ENST00000581525 SLC39A5Q6ZMH5 540 aa14.56□□□□□ -0.08
SNORD55-201ENST00000581525 PCSK9Q8NBP7 692 aaKnown RBP14.56□□□□□ -0.08
SNORD55-201ENST00000581525 LENG1Q96BZ8 264 aaPredicted RBP14.56□□□□□ -0.08
SNORD55-201ENST00000581525 WDR11Q9BZH6 1224 aa14.56□□□□□ -0.08
SNORD55-201ENST00000581525 SENP6Q9GZR1 1112 aaPredicted RBP14.56□□□□□ -0.08
SNORD55-201ENST00000581525 PSTPIP2Q9H939 334 aa14.56□□□□□ -0.08
SNORD55-201ENST00000581525 hCG_1642624A0A1W2PR95 340 aa14.55□□□□□ -0.08
SNORD55-201ENST00000581525 MYADML2A6NDP7 307 aa14.55□□□□□ -0.08
SNORD55-201ENST00000581525 STXBP3O00186 592 aa14.55□□□□□ -0.08
SNORD55-201ENST00000581525 TGFB3P10600 412 aa14.55□□□□□ -0.08
SNORD55-201ENST00000581525 WWC2Q6AWC2 1192 aa14.55□□□□□ -0.08
SNORD55-201ENST00000581525 TYW1BQ6NUM6 668 aa14.55□□□□□ -0.08
SNORD55-201ENST00000581525 XRRA1Q6P2D8 792 aa14.55□□□□□ -0.08
SNORD55-201ENST00000581525 USP17L6PQ6QN14 398 aa14.55□□□□□ -0.08
SNORD55-201ENST00000581525 EEPD1Q7L9B9 569 aa14.55□□□□□ -0.08
SNORD55-201ENST00000581525 PIBF1Q8WXW3 757 aa14.55□□□□□ -0.08
SNORD55-201ENST00000581525 RNF26Q9BY78 433 aaPredicted RBP14.55□□□□□ -0.08
SNORD55-201ENST00000581525 SPC25Q9HBM1 224 aa14.55□□□□□ -0.08
SNORD55-201ENST00000581525 RIC8AQ9NPQ8 531 aa14.55□□□□□ -0.08
SNORD55-201ENST00000581525 ELP1O95163 1332 aa14.55□□□□□ -0.08
SNORD55-201ENST00000581525 ESYT2A0FGR8 921 aa14.54□□□□□ -0.08
SNORD55-201ENST00000581525 A6NJR5 290 aa14.54□□□□□ -0.08
SNORD55-201ENST00000581525 DYNC1LI2O43237 492 aaPredicted RBP14.54□□□□□ -0.08
SNORD55-201ENST00000581525 ARIH2O95376 493 aa14.54□□□□□ -0.08
SNORD55-201ENST00000581525 EIF2AK2P19525 551 aaKnown RBP14.54□□□□□ -0.08
SNORD55-201ENST00000581525 ICAM3P32942 547 aa14.54□□□□□ -0.08
SNORD55-201ENST00000581525 RBM25P49756 843 aaKnown RBP14.54□□□□□ -0.08
SNORD55-201ENST00000581525 CLK2P49760 499 aaKnown RBP14.54□□□□□ -0.08
SNORD55-201ENST00000581525 CDK7P50613 346 aa14.54□□□□□ -0.08
SNORD55-201ENST00000581525 ACLYP53396 1101 aa14.54□□□□□ -0.08
SNORD55-201ENST00000581525 IRX5P78411 483 aaPredicted RBP14.54□□□□□ -0.08
SNORD55-201ENST00000581525 MRPS9P82933 396 aaKnown RBP14.54□□□□□ -0.08
SNORD55-201ENST00000581525 ANKRD1Q15327 319 aa14.54□□□□□ -0.08
SNORD55-201ENST00000581525 KCNV1Q6PIU1 500 aa14.54□□□□□ -0.08
SNORD55-201ENST00000581525 TLK2Q86UE8 772 aa14.54□□□□□ -0.08
SNORD55-201ENST00000581525 FAM177A1Q8N128 213 aaPredicted RBP14.54□□□□□ -0.08
SNORD55-201ENST00000581525 SLC43A3Q8NBI5 491 aa14.54□□□□□ -0.08
SNORD55-201ENST00000581525 IL27Q8NEV9 243 aa14.54□□□□□ -0.08
SNORD55-201ENST00000581525 DPF3Q92784 378 aa14.54□□□□□ -0.08
SNORD55-201ENST00000581525 EMID1Q96A84 441 aaPredicted RBP14.54□□□□□ -0.08
SNORD55-201ENST00000581525 INPP4AQ96PE3 977 aaPredicted RBP14.54□□□□□ -0.08
SNORD55-201ENST00000581525 KIF2CQ99661 725 aa14.54□□□□□ -0.08
SNORD55-201ENST00000581525 SEZ6LQ9BYH1 1024 aa14.54□□□□□ -0.08
SNORD55-201ENST00000581525 GLT8D2Q9H1C3 349 aa14.54□□□□□ -0.08
SNORD55-201ENST00000581525 DDX41Q9UJV9 622 aaKnown RBP14.54□□□□□ -0.08
SNORD55-201ENST00000581525 NR2E3Q9Y5X4 410 aa14.54□□□□□ -0.08
SNORD55-201ENST00000581525 A0A1W2PQ45 241 aaPredicted RBP14.53□□□□□ -0.08
SNORD55-201ENST00000581525 A0A1W2PQY0 241 aa14.53□□□□□ -0.08
SNORD55-201ENST00000581525 EVI5O60447 810 aa14.53□□□□□ -0.08
SNORD55-201ENST00000581525 PFKFB2O60825 505 aa14.53□□□□□ -0.08
SNORD55-201ENST00000581525 CABYRO75952 493 aa14.53□□□□□ -0.08
SNORD55-201ENST00000581525 ASGR1P07306 291 aa14.53□□□□□ -0.08
SNORD55-201ENST00000581525 C6orf222P0C671 652 aaPredicted RBP14.53□□□□□ -0.08
SNORD55-201ENST00000581525 SCG2P13521 617 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms