RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 A6NJR5 290 aa14.54□□□□□ -0.08
SENP3-204ENST00000580997 CSF2RAP15509 400 aa14.54□□□□□ -0.08
SENP3-204ENST00000580997 CPT1AP50416 773 aa14.54□□□□□ -0.08
SENP3-204ENST00000580997 PURAQ00577 322 aaKnown RBP14.54□□□□□ -0.08
SENP3-204ENST00000580997 RASIP1Q5U651 963 aa14.54□□□□□ -0.08
SENP3-204ENST00000580997 FBXO11Q86XK2 927 aa14.54□□□□□ -0.08
SENP3-204ENST00000580997 TMEM199Q8N511 208 aa14.54□□□□□ -0.08
SENP3-204ENST00000580997 NSUN6Q8TEA1 469 aaKnown RBP14.54□□□□□ -0.08
SENP3-204ENST00000580997 IWS1Q96ST2 819 aa14.54□□□□□ -0.08
SENP3-204ENST00000580997 SEMA6BQ9H3T3 888 aa14.54□□□□□ -0.08
SENP3-204ENST00000580997 VAT1LQ9HCJ6 419 aa14.54□□□□□ -0.08
SENP3-204ENST00000580997 POLR3EQ9NVU0 708 aa14.54□□□□□ -0.08
SENP3-204ENST00000580997 COL20A1Q9P218 1284 aa14.54□□□□□ -0.08
SENP3-204ENST00000580997 E7EWF7 191 aa14.53□□□□□ -0.08
SENP3-204ENST00000580997 OPLAHO14841 1288 aa14.53□□□□□ -0.08
SENP3-204ENST00000580997 B4GALT4O60513 344 aa14.53□□□□□ -0.08
SENP3-204ENST00000580997 TXNP10599 105 aaKnown RBP14.53□□□□□ -0.08
SENP3-204ENST00000580997 PSMC6P62333 389 aa14.53□□□□□ -0.08
SENP3-204ENST00000580997 TROAPQ12815 778 aa14.53□□□□□ -0.08
SENP3-204ENST00000580997 PPIGQ13427 754 aaKnown RBP eCLIP14.53□□□□□ -0.081e-6■■■□□ 18.4
SENP3-204ENST00000580997 PPP2R5BQ15173 497 aa14.53□□□□□ -0.08
SENP3-204ENST00000580997 TMEM240Q5SV17 173 aa14.53□□□□□ -0.08
SENP3-204ENST00000580997 ZNF697Q5TEC3 545 aa14.53□□□□□ -0.08
SENP3-204ENST00000580997 CCDC62Q6P9F0 684 aa14.53□□□□□ -0.08
SENP3-204ENST00000580997 SLC17A8Q8NDX2 589 aa14.53□□□□□ -0.08
SENP3-204ENST00000580997 TAAR1Q96RJ0 339 aa14.53□□□□□ -0.08
SENP3-204ENST00000580997 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.53□□□□□ -0.083e-6■■■□□ 18.2
SENP3-204ENST00000580997 AMNQ9BXJ7 453 aa14.53□□□□□ -0.08
SENP3-204ENST00000580997 TRPV6Q9H1D0 765 aa14.53□□□□□ -0.08
SENP3-204ENST00000580997 ALDH8A1Q9H2A2 487 aaPredicted RBP14.53□□□□□ -0.08
SENP3-204ENST00000580997 MAP3K20Q9NYL2 800 aaKnown RBP14.53□□□□□ -0.08
SENP3-204ENST00000580997 TAF6LQ9Y6J9 622 aa14.53□□□□□ -0.08
SENP3-204ENST00000580997 TMEM265A0A087WTH1 108 aa14.52□□□□□ -0.09
SENP3-204ENST00000580997 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.52□□□□□ -0.09
SENP3-204ENST00000580997 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.52□□□□□ -0.09
SENP3-204ENST00000580997 IFIT3O14879 490 aaKnown RBP14.52□□□□□ -0.09
SENP3-204ENST00000580997 ZBTB5O15062 677 aa14.52□□□□□ -0.09
SENP3-204ENST00000580997 KPNA6O60684 536 aa14.52□□□□□ -0.09
SENP3-204ENST00000580997 PPP1R11O60927 126 aaPredicted RBP14.52□□□□□ -0.09
SENP3-204ENST00000580997 HSD17B4P51659 736 aa14.52□□□□□ -0.09
SENP3-204ENST00000580997 TTLL4Q14679 1199 aa14.52□□□□□ -0.09
SENP3-204ENST00000580997 GRM4Q14833 912 aa14.52□□□□□ -0.09
SENP3-204ENST00000580997 STXBP2Q15833 593 aa14.52□□□□□ -0.09
SENP3-204ENST00000580997 SLC35G1Q2M3R5 365 aa14.52□□□□□ -0.09
SENP3-204ENST00000580997 BRDTQ58F21 947 aaPredicted RBP14.52□□□□□ -0.09
SENP3-204ENST00000580997 STOX1Q6ZVD7 989 aa14.52□□□□□ -0.09
SENP3-204ENST00000580997 SAMD3Q8N6K7 520 aa14.52□□□□□ -0.09
SENP3-204ENST00000580997 OR6J1Q8NGC5 347 aa14.52□□□□□ -0.09
SENP3-204ENST00000580997 NCOA7Q8NI08 942 aa14.52□□□□□ -0.09
SENP3-204ENST00000580997 RMDN3Q96TC7 470 aa14.52□□□□□ -0.09
SENP3-204ENST00000580997 MTG1Q9BT17 334 aaPredicted RBP14.52□□□□□ -0.09
SENP3-204ENST00000580997 TTYH1Q9H313 450 aaPredicted RBP14.52□□□□□ -0.09
SENP3-204ENST00000580997 HIPK3Q9H422 1215 aa14.52□□□□□ -0.09
SENP3-204ENST00000580997 RIOX1Q9H6W3 641 aa14.52□□□□□ -0.09
SENP3-204ENST00000580997 DHX16O60231 1041 aaKnown RBP14.51□□□□□ -0.09
SENP3-204ENST00000580997 ARIH2O95376 493 aa14.51□□□□□ -0.09
SENP3-204ENST00000580997 CYP2C18P33260 490 aa14.51□□□□□ -0.09
SENP3-204ENST00000580997 RALYLQ86SE5 291 aaKnown RBP14.51□□□□□ -0.09
SENP3-204ENST00000580997 IGDCC4Q8TDY8 1250 aa14.51□□□□□ -0.09
SENP3-204ENST00000580997 COPS5Q92905 334 aa14.51□□□□□ -0.09
SENP3-204ENST00000580997 FAM161BQ96MY7 647 aa14.51□□□□□ -0.09
SENP3-204ENST00000580997 CDX2Q99626 313 aaPredicted RBP14.51□□□□□ -0.09
SENP3-204ENST00000580997 NOC4LQ9BVI4 516 aaKnown RBP14.51□□□□□ -0.09
SENP3-204ENST00000580997 PPP1R12CQ9BZL4 782 aa14.51□□□□□ -0.09
SENP3-204ENST00000580997 SENP2Q9HC62 589 aa14.51□□□□□ -0.09
SENP3-204ENST00000580997 IL23AQ9NPF7 189 aa14.51□□□□□ -0.09
SENP3-204ENST00000580997 UMODL1Q5DID0 1318 aa14.5□□□□□ -0.09
SENP3-204ENST00000580997 ERICH2A1L162 156 aa14.5□□□□□ -0.09
SENP3-204ENST00000580997 CYTH3O43739 400 aa14.5□□□□□ -0.09
SENP3-204ENST00000580997 EIF3JO75822 258 aaKnown RBP14.5□□□□□ -0.09
SENP3-204ENST00000580997 MYL3P08590 195 aa14.5□□□□□ -0.09
SENP3-204ENST00000580997 SUPT20HL2P0C7V6 817 aa14.5□□□□□ -0.09
SENP3-204ENST00000580997 ANTXR2P58335 489 aa14.5□□□□□ -0.09
SENP3-204ENST00000580997 TRAF1Q13077 416 aa14.5□□□□□ -0.09
SENP3-204ENST00000580997 SART3Q15020 963 aaKnown RBP14.5□□□□□ -0.09
SENP3-204ENST00000580997 NFRKBQ6P4R8 1299 aa14.5□□□□□ -0.09
SENP3-204ENST00000580997 PSRC1Q6PGN9 363 aaPredicted RBP14.5□□□□□ -0.09
SENP3-204ENST00000580997 ZNF365Q70YC5 407 aa14.5□□□□□ -0.09
SENP3-204ENST00000580997 MB21D2Q8IYB1 491 aaPredicted RBP14.5□□□□□ -0.09
SENP3-204ENST00000580997 MAP3K14Q99558 947 aa14.5□□□□□ -0.09
SENP3-204ENST00000580997 MTA3Q9BTC8 594 aa14.5□□□□□ -0.09
SENP3-204ENST00000580997 GPHNQ9NQX3 736 aaPredicted RBP14.5□□□□□ -0.09
SENP3-204ENST00000580997 PXMP2Q9NR77 195 aa14.5□□□□□ -0.09
SENP3-204ENST00000580997 PCDHA1Q9Y5I3 950 aa14.5□□□□□ -0.09
SENP3-204ENST00000580997 CFBP00751 764 aa14.49□□□□□ -0.09
SENP3-204ENST00000580997 PRR29P0C7W0 189 aa14.49□□□□□ -0.09
SENP3-204ENST00000580997 PTPN11Q06124 597 aaPredicted RBP14.49□□□□□ -0.09
SENP3-204ENST00000580997 WTAPQ15007 396 aa14.49□□□□□ -0.09
SENP3-204ENST00000580997 NBPF20Q3BBV1 942 aa14.49□□□□□ -0.09
SENP3-204ENST00000580997 ARHGEF16Q5VV41 709 aa14.49□□□□□ -0.09
SENP3-204ENST00000580997 HERVK_113Q902F9 699 aa14.49□□□□□ -0.09
SENP3-204ENST00000580997 EMID1Q96A84 441 aaPredicted RBP14.49□□□□□ -0.09
SENP3-204ENST00000580997 VWCEQ96DN2 955 aa14.49□□□□□ -0.09
SENP3-204ENST00000580997 WNT8AQ9H1J5 351 aa14.49□□□□□ -0.09
SENP3-204ENST00000580997 TRMT13Q9NUP7 481 aaKnown RBP14.49□□□□□ -0.09
SENP3-204ENST00000580997 DDX41Q9UJV9 622 aaKnown RBP14.49□□□□□ -0.09
SENP3-204ENST00000580997 RBM8AQ9Y5S9 174 aaKnown RBP14.49□□□□□ -0.09
SENP3-204ENST00000580997 CHD9Q3L8U1 2897 aa14.49□□□□□ -0.09
SENP3-204ENST00000580997 PNMA6FA0A0J9YX94 578 aa14.48□□□□□ -0.09
SENP3-204ENST00000580997 GH1P01241 217 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms