RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 RAD9AQ99638 391 aa9.27□□□□□ -0.93
SMARCE1-217ENST00000580654 ZBED2Q9BTP6 218 aa9.27□□□□□ -0.93
SMARCE1-217ENST00000580654 UPF3BQ9BZI7 483 aaKnown RBP9.27□□□□□ -0.93
SMARCE1-217ENST00000580654 SLC38A10Q9HBR0 1119 aa9.27□□□□□ -0.93
SMARCE1-217ENST00000580654 MRS2Q9HD23 443 aa9.27□□□□□ -0.93
SMARCE1-217ENST00000580654 GOPCQ9HD26 462 aa9.27□□□□□ -0.93
SMARCE1-217ENST00000580654 FAM186AA6NE01 2351 aa9.27□□□□□ -0.93
SMARCE1-217ENST00000580654 TULP1O00294 542 aaPredicted RBP9.26□□□□□ -0.93
SMARCE1-217ENST00000580654 GNAI3P08754 354 aa9.26□□□□□ -0.93
SMARCE1-217ENST00000580654 VCPP55072 806 aaKnown RBP9.26□□□□□ -0.93
SMARCE1-217ENST00000580654 SMAD2Q15796 467 aaKnown RBP9.26□□□□□ -0.93
SMARCE1-217ENST00000580654 NBPF20Q3BBV1 942 aa9.26□□□□□ -0.93
SMARCE1-217ENST00000580654 IQSEC1Q6DN90 963 aa9.26□□□□□ -0.93
SMARCE1-217ENST00000580654 TRIM67Q6ZTA4 783 aa9.26□□□□□ -0.93
SMARCE1-217ENST00000580654 EEPD1Q7L9B9 569 aa9.26□□□□□ -0.93
SMARCE1-217ENST00000580654 ASCL5Q7RTU5 278 aa9.26□□□□□ -0.93
SMARCE1-217ENST00000580654 PRPF38AQ8NAV1 312 aaKnown RBP9.26□□□□□ -0.93
SMARCE1-217ENST00000580654 RETREG2Q8NC44 543 aa9.26□□□□□ -0.93
SMARCE1-217ENST00000580654 CHST13Q8NET6 341 aa9.26□□□□□ -0.93
SMARCE1-217ENST00000580654 EAF2Q96CJ1 260 aaPredicted RBP9.26□□□□□ -0.93
SMARCE1-217ENST00000580654 CRNKL1Q9BZJ0 848 aaKnown RBP9.26□□□□□ -0.93
SMARCE1-217ENST00000580654 CCDC8Q9H0W5 538 aaPredicted RBP9.26□□□□□ -0.93
SMARCE1-217ENST00000580654 KANSL2Q9H9L4 492 aa9.26□□□□□ -0.93
SMARCE1-217ENST00000580654 A1CFQ9NQ94 594 aaKnown RBP9.26□□□□□ -0.93
SMARCE1-217ENST00000580654 FBXO40Q9UH90 709 aa9.26□□□□□ -0.93
SMARCE1-217ENST00000580654 VPS13AQ96RL7 3174 aa9.26□□□□□ -0.93
SMARCE1-217ENST00000580654 MICAL3Q7RTP6 2002 aa9.26□□□□□ -0.93
SMARCE1-217ENST00000580654 DMDP11532 3685 aa9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 ZFHX4Q86UP3 3567 aa9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 TCRBV5S4A2TA0A5A2 114 aa9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 ASB14A6NK59 587 aa9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 PROB1E7EW31 1015 aa9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 MBTPS2O43462 519 aa9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 PRKAB2O43741 272 aa9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 NBNO60934 754 aa9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 ZBED4O75132 1171 aa9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 NDUFB10O96000 172 aa9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 PDE6AP16499 860 aa9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 DLX2Q07687 328 aaPredicted RBP9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 PKN1Q16512 942 aa9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 FAM47CQ5HY64 1035 aa9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 C12orf60Q5U649 245 aa9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 FAM117BQ6P1L5 589 aa9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 TMED8Q6PL24 325 aaPredicted RBP9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 Q6ZNB5 142 aa9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 C16orf86Q6ZW13 317 aa9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 FBXL6Q8N531 539 aa9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 BANK1Q8NDB2 785 aa9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 PURBQ96QR8 312 aaKnown RBP9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 API5Q9BZZ5 524 aaKnown RBP9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 HOMER2Q9NSB8 354 aa9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 POLR3EQ9NVU0 708 aa9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 FAM50BQ9Y247 325 aa9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 RALGAPA2Q2PPJ7 1873 aa9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 PKD1L2Q7Z442 2459 aa9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 WDR87Q6ZQQ6 2873 aa9.25□□□□□ -0.93
SMARCE1-217ENST00000580654 F5H6K3 240 aa9.24□□□□□ -0.93
SMARCE1-217ENST00000580654 KRT37O76014 449 aa9.24□□□□□ -0.93
SMARCE1-217ENST00000580654 CXCL10P02778 98 aa9.24□□□□□ -0.93
SMARCE1-217ENST00000580654 MYL3P08590 195 aa9.24□□□□□ -0.93
SMARCE1-217ENST00000580654 OAZ1P54368 228 aa9.24□□□□□ -0.93
SMARCE1-217ENST00000580654 KLRC3Q07444 240 aa9.24□□□□□ -0.93
SMARCE1-217ENST00000580654 BFSP2Q13515 415 aa9.24□□□□□ -0.93
SMARCE1-217ENST00000580654 CLUL1Q15846 466 aa9.24□□□□□ -0.93
SMARCE1-217ENST00000580654 CTC1Q2NKJ3 1217 aa9.24□□□□□ -0.93
SMARCE1-217ENST00000580654 LRRFIP1Q32MZ4 808 aaKnown RBP9.24□□□□□ -0.93
SMARCE1-217ENST00000580654 SLFNL1Q499Z3 407 aa9.24□□□□□ -0.93
SMARCE1-217ENST00000580654 DUSP28Q4G0W2 176 aa9.24□□□□□ -0.93
SMARCE1-217ENST00000580654 TIGD5Q53EQ6 642 aa9.24□□□□□ -0.93
SMARCE1-217ENST00000580654 NFRKBQ6P4R8 1299 aa9.24□□□□□ -0.93
SMARCE1-217ENST00000580654 CNKSR3Q6P9H4 555 aa9.24□□□□□ -0.93
SMARCE1-217ENST00000580654 EP400NLQ6ZTU2 488 aa9.24□□□□□ -0.93
SMARCE1-217ENST00000580654 KIAA1211Q6ZU35 1233 aa9.24□□□□□ -0.93
SMARCE1-217ENST00000580654 RPAINQ86UA6 219 aa9.24□□□□□ -0.93
SMARCE1-217ENST00000580654 MORC4Q8TE76 937 aa9.24□□□□□ -0.93
SMARCE1-217ENST00000580654 DHX38Q92620 1227 aaKnown RBP9.24□□□□□ -0.93
SMARCE1-217ENST00000580654 ATOH1Q92858 354 aaPredicted RBP9.24□□□□□ -0.93
SMARCE1-217ENST00000580654 KIFC2Q96AC6 838 aa9.24□□□□□ -0.93
SMARCE1-217ENST00000580654 MTG1Q9BT17 334 aaPredicted RBP9.24□□□□□ -0.93
SMARCE1-217ENST00000580654 ARMT1Q9H993 441 aa9.24□□□□□ -0.93
SMARCE1-217ENST00000580654 CLDND1Q9NY35 253 aa9.24□□□□□ -0.93
SMARCE1-217ENST00000580654 STK24Q9Y6E0 443 aa9.24□□□□□ -0.93
SMARCE1-217ENST00000580654 ZNF532Q9HCE3 1301 aa9.24□□□□□ -0.93
SMARCE1-217ENST00000580654 CHD8Q9HCK8 2581 aa9.23□□□□□ -0.93
SMARCE1-217ENST00000580654 PRR23AA6NEV1 266 aa9.23□□□□□ -0.93
SMARCE1-217ENST00000580654 H3BNC9 293 aa9.23□□□□□ -0.93
SMARCE1-217ENST00000580654 GNAI2P04899 355 aa9.23□□□□□ -0.93
SMARCE1-217ENST00000580654 HTRA4P83105 476 aaPredicted RBP9.23□□□□□ -0.93
SMARCE1-217ENST00000580654 ZXDAP98168 799 aa9.23□□□□□ -0.93
SMARCE1-217ENST00000580654 SLFN5Q08AF3 891 aa9.23□□□□□ -0.93
SMARCE1-217ENST00000580654 EPC2Q52LR7 807 aa9.23□□□□□ -0.93
SMARCE1-217ENST00000580654 SLC9C2Q5TAH2 1124 aa9.23□□□□□ -0.93
SMARCE1-217ENST00000580654 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.23□□□□□ -0.93
SMARCE1-217ENST00000580654 SUGP1Q8IWZ8 645 aaKnown RBP9.23□□□□□ -0.93
SMARCE1-217ENST00000580654 AFAP1L1Q8TED9 768 aa9.23□□□□□ -0.93
SMARCE1-217ENST00000580654 SLC4A5Q9BY07 1137 aa9.23□□□□□ -0.93
SMARCE1-217ENST00000580654 IRF2BPLQ9H1B7 796 aa9.23□□□□□ -0.93
SMARCE1-217ENST00000580654 NSUN3Q9H649 340 aaKnown RBP9.23□□□□□ -0.93
SMARCE1-217ENST00000580654 ACAD9Q9H845 621 aa9.23□□□□□ -0.93
SMARCE1-217ENST00000580654 VTA1Q9NP79 307 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms