RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	NOC4L	Q9BVI4	516 aa	Known RBP	7.37	□□□□□ -1.23
KPNB1-209	ENST00000580158	KIAA1683	Q9H0B3	1180 aa		7.37	□□□□□ -1.23
KPNB1-209	ENST00000580158	SIL1	Q9H173	461 aa		7.37	□□□□□ -1.23
KPNB1-209	ENST00000580158	WNT8A	Q9H1J5	351 aa		7.37	□□□□□ -1.23
KPNB1-209	ENST00000580158	BICC1	Q9H694	974 aa	Known RBP	7.37	□□□□□ -1.23
KPNB1-209	ENST00000580158	ZHX1	Q9UKY1	873 aa	Predicted RBP	7.37	□□□□□ -1.23
KPNB1-209	ENST00000580158	COL4A6	Q14031	1691 aa		7.37	□□□□□ -1.23
KPNB1-209	ENST00000580158	TET1	Q8NFU7	2136 aa		7.36	□□□□□ -1.23
KPNB1-209	ENST00000580158	DCHS1	Q96JQ0	3298 aa		7.36	□□□□□ -1.23
KPNB1-209	ENST00000580158		A0A1B0GUL7	405 aa		7.36	□□□□□ -1.23
KPNB1-209	ENST00000580158	MYADML2	A6NDP7	307 aa		7.36	□□□□□ -1.23
KPNB1-209	ENST00000580158	PPFIA3	O75145	1194 aa		7.36	□□□□□ -1.23
KPNB1-209	ENST00000580158	CABYR	O75952	493 aa		7.36	□□□□□ -1.23
KPNB1-209	ENST00000580158	GH2	P01242	217 aa		7.36	□□□□□ -1.23
KPNB1-209	ENST00000580158	AVPR2	P30518	371 aa		7.36	□□□□□ -1.23
KPNB1-209	ENST00000580158	MECOM	Q03112	1051 aa		7.36	□□□□□ -1.23
KPNB1-209	ENST00000580158	ITGA7	Q13683	1181 aa		7.36	□□□□□ -1.23
KPNB1-209	ENST00000580158	ATP2B3	Q16720	1220 aa		7.36	□□□□□ -1.23
KPNB1-209	ENST00000580158	PTPRO	Q16827	1216 aa		7.36	□□□□□ -1.23
KPNB1-209	ENST00000580158	VASH1	Q7L8A9	365 aa	Predicted RBP	7.36	□□□□□ -1.23
KPNB1-209	ENST00000580158	ADSSL1	Q8N142	457 aa		7.36	□□□□□ -1.23
KPNB1-209	ENST00000580158	LINC00528	Q8N1L1	170 aa		7.36	□□□□□ -1.23
KPNB1-209	ENST00000580158	MSL3	Q8N5Y2	521 aa	Known RBP	7.36	□□□□□ -1.23
KPNB1-209	ENST00000580158	NKD2	Q969F2	451 aa	Predicted RBP	7.36	□□□□□ -1.23
KPNB1-209	ENST00000580158	PABPC5	Q96DU9	382 aa	Known RBP	7.36	□□□□□ -1.23
KPNB1-209	ENST00000580158	TGS1	Q96RS0	853 aa	Known RBP	7.36	□□□□□ -1.23
KPNB1-209	ENST00000580158	CRBN	Q96SW2	442 aa		7.36	□□□□□ -1.23
KPNB1-209	ENST00000580158	PCGF6	Q9BYE7	350 aa		7.36	□□□□□ -1.23
KPNB1-209	ENST00000580158	FTO	Q9C0B1	505 aa	Known RBP eCLIP	7.36	□□□□□ -1.23
KPNB1-209	ENST00000580158	TANGO6	Q9C0B7	1094 aa		7.36	□□□□□ -1.23
KPNB1-209	ENST00000580158	SRCIN1	Q9C0H9	1055 aa		7.36	□□□□□ -1.23
KPNB1-209	ENST00000580158	SUGCT	Q9HAC7	445 aa		7.36	□□□□□ -1.23
KPNB1-209	ENST00000580158	CABP5	Q9NP86	173 aa		7.36	□□□□□ -1.23
KPNB1-209	ENST00000580158	MTUS1	Q9ULD2	1270 aa		7.36	□□□□□ -1.23
KPNB1-209	ENST00000580158	PARP14	Q460N5	1801 aa		7.36	□□□□□ -1.23
KPNB1-209	ENST00000580158	NLRC5	Q86WI3	1866 aa		7.35	□□□□□ -1.23
KPNB1-209	ENST00000580158	EYA2	O00167	538 aa		7.35	□□□□□ -1.23
KPNB1-209	ENST00000580158	ZEB2	O60315	1214 aa		7.35	□□□□□ -1.23
KPNB1-209	ENST00000580158	ARHGEF15	O94989	841 aa		7.35	□□□□□ -1.23
KPNB1-209	ENST00000580158	BAG3	O95817	575 aa		7.35	□□□□□ -1.23
KPNB1-209	ENST00000580158	PGK2	P07205	417 aa		7.35	□□□□□ -1.23
KPNB1-209	ENST00000580158	SUPT20HL2	P0C7V6	817 aa		7.35	□□□□□ -1.23
KPNB1-209	ENST00000580158	RFC2	P35250	354 aa		7.35	□□□□□ -1.23
KPNB1-209	ENST00000580158	NBL1	P41271	181 aa		7.35	□□□□□ -1.23
KPNB1-209	ENST00000580158	PHKA1	P46020	1223 aa		7.35	□□□□□ -1.23
KPNB1-209	ENST00000580158	GJA9	P57773	515 aa		7.35	□□□□□ -1.23
KPNB1-209	ENST00000580158	SHROOM1	Q2M3G4	852 aa	Predicted RBP	7.35	□□□□□ -1.23
KPNB1-209	ENST00000580158	TUSC1	Q2TAM9	212 aa		7.35	□□□□□ -1.23
KPNB1-209	ENST00000580158	ZNF792	Q3KQV3	632 aa		7.35	□□□□□ -1.23
KPNB1-209	ENST00000580158	RABL6	Q3YEC7	729 aa	Predicted RBP	7.35	□□□□□ -1.23
KPNB1-209	ENST00000580158	MCTP2	Q6DN12	878 aa		7.35	□□□□□ -1.23
KPNB1-209	ENST00000580158	SLC4A10	Q6U841	1118 aa		7.35	□□□□□ -1.23
KPNB1-209	ENST00000580158	METTL16	Q86W50	562 aa	Known RBP	7.35	□□□□□ -1.23
KPNB1-209	ENST00000580158	SLC43A3	Q8NBI5	491 aa		7.35	□□□□□ -1.23
KPNB1-209	ENST00000580158	KLHDC4	Q8TBB5	520 aa		7.35	□□□□□ -1.23
KPNB1-209	ENST00000580158	KAZALD1	Q96I82	304 aa		7.35	□□□□□ -1.23
KPNB1-209	ENST00000580158	AGBL1	Q96MI9	1066 aa		7.35	□□□□□ -1.23
KPNB1-209	ENST00000580158	CEP126	Q9P2H0	1117 aa		7.35	□□□□□ -1.23
KPNB1-209	ENST00000580158	CACNA1H	O95180	2353 aa		7.35	□□□□□ -1.23
KPNB1-209	ENST00000580158	MYH8	P13535	1937 aa		7.35	□□□□□ -1.23
KPNB1-209	ENST00000580158	TANC1	Q9C0D5	1861 aa		7.34	□□□□□ -1.23
KPNB1-209	ENST00000580158	PDS5A	Q29RF7	1337 aa	Known RBP	7.34	□□□□□ -1.23
KPNB1-209	ENST00000580158	NCK2	O43639	380 aa		7.34	□□□□□ -1.23
KPNB1-209	ENST00000580158	B4GALT4	O60513	344 aa		7.34	□□□□□ -1.23
KPNB1-209	ENST00000580158	LILRB3	O75022	631 aa		7.34	□□□□□ -1.23
KPNB1-209	ENST00000580158	BAIAP3	O94812	1187 aa		7.34	□□□□□ -1.23
KPNB1-209	ENST00000580158	NBPF7	P0C2Y1	421 aa	Predicted RBP	7.34	□□□□□ -1.23
KPNB1-209	ENST00000580158	ERVK-21	P61565	698 aa		7.34	□□□□□ -1.23
KPNB1-209	ENST00000580158	ZXDA	P98168	799 aa		7.34	□□□□□ -1.23
KPNB1-209	ENST00000580158	COL9A2	Q14055	689 aa	Predicted RBP	7.34	□□□□□ -1.23
KPNB1-209	ENST00000580158	PUM1	Q14671	1186 aa	Known RBP eCLIP	7.34	□□□□□ -1.23
KPNB1-209	ENST00000580158	SMAD2	Q15796	467 aa	Known RBP	7.34	□□□□□ -1.23
KPNB1-209	ENST00000580158	QPCT	Q16769	361 aa		7.34	□□□□□ -1.23
KPNB1-209	ENST00000580158	TIGD5	Q53EQ6	642 aa		7.34	□□□□□ -1.23
KPNB1-209	ENST00000580158	MYSM1	Q5VVJ2	828 aa		7.34	□□□□□ -1.23
KPNB1-209	ENST00000580158	CCDC102B	Q68D86	513 aa		7.34	□□□□□ -1.23
KPNB1-209	ENST00000580158	MEIOB	Q8N635	442 aa		7.34	□□□□□ -1.23
KPNB1-209	ENST00000580158	TSR2	Q969E8	191 aa	Known RBP	7.34	□□□□□ -1.23
KPNB1-209	ENST00000580158	TRPV6	Q9H1D0	765 aa		7.34	□□□□□ -1.23
KPNB1-209	ENST00000580158	UPF3A	Q9H1J1	476 aa	Known RBP	7.34	□□□□□ -1.23
KPNB1-209	ENST00000580158	ABHD16B	Q9H3Z7	469 aa		7.34	□□□□□ -1.23
KPNB1-209	ENST00000580158	DNAJC18	Q9H819	358 aa		7.34	□□□□□ -1.23
KPNB1-209	ENST00000580158	CLDND1	Q9NY35	253 aa		7.34	□□□□□ -1.23
KPNB1-209	ENST00000580158	LIMD1	Q9UGP4	676 aa		7.34	□□□□□ -1.23
KPNB1-209	ENST00000580158	PALD1	Q9ULE6	856 aa		7.34	□□□□□ -1.23
KPNB1-209	ENST00000580158	ADAMTS8	Q9UP79	889 aa		7.34	□□□□□ -1.23
KPNB1-209	ENST00000580158	MAP4K5	Q9Y4K4	846 aa		7.34	□□□□□ -1.23
KPNB1-209	ENST00000580158	KMT2B	Q9UMN6	2715 aa	Predicted RBP	7.34	□□□□□ -1.23
KPNB1-209	ENST00000580158	MAGEB6P1	A0A0J9YX57	407 aa		7.33	□□□□□ -1.24
KPNB1-209	ENST00000580158	STXBP3	O00186	592 aa		7.33	□□□□□ -1.24
KPNB1-209	ENST00000580158	APAF1	O14727	1248 aa		7.33	□□□□□ -1.24
KPNB1-209	ENST00000580158	FLOT1	O75955	427 aa		7.33	□□□□□ -1.24
KPNB1-209	ENST00000580158	FSHR	P23945	695 aa		7.33	□□□□□ -1.24
KPNB1-209	ENST00000580158	COPB2	P35606	906 aa		7.33	□□□□□ -1.24
KPNB1-209	ENST00000580158	VCP	P55072	806 aa	Known RBP	7.33	□□□□□ -1.24
KPNB1-209	ENST00000580158	SIGLEC14	Q08ET2	396 aa		7.33	□□□□□ -1.24
KPNB1-209	ENST00000580158	ACVR2B	Q13705	512 aa		7.33	□□□□□ -1.24
KPNB1-209	ENST00000580158	ST3GAL2	Q16842	350 aa		7.33	□□□□□ -1.24
KPNB1-209	ENST00000580158	ABCB5	Q2M3G0	1257 aa		7.33	□□□□□ -1.24
KPNB1-209	ENST00000580158	CCDC144B	Q3MJ40	725 aa		7.33	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms