RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 DEFB128Q7Z7B8 93 aa20.97■□□□□ 0.95
MKS1-209ENST00000580127 MCF2L2Q86YR7 1114 aa20.97■□□□□ 0.95
MKS1-209ENST00000580127 CCDC155Q8N6L0 562 aa20.97■□□□□ 0.95
MKS1-209ENST00000580127 PHOSPHO2Q8TCD6 241 aa20.97■□□□□ 0.95
MKS1-209ENST00000580127 FTOQ9C0B1 505 aaKnown RBP eCLIP20.97■□□□□ 0.95
MKS1-209ENST00000580127 PITPNM1O00562 1244 aa20.96■□□□□ 0.95
MKS1-209ENST00000580127 GTPBP6O43824 516 aaPredicted RBP20.96■□□□□ 0.95
MKS1-209ENST00000580127 PTGS1P23219 599 aa20.96■□□□□ 0.95
MKS1-209ENST00000580127 RABGGTBP53611 331 aa20.96■□□□□ 0.95
MKS1-209ENST00000580127 NMIQ13287 307 aaPredicted RBP20.96■□□□□ 0.95
MKS1-209ENST00000580127 SLC30A10Q6XR72 485 aa20.96■□□□□ 0.95
MKS1-209ENST00000580127 YBX2Q9Y2T7 364 aaKnown RBP20.96■□□□□ 0.95
MKS1-209ENST00000580127 SNHG28P0DPA3 235 aa20.95■□□□□ 0.94
MKS1-209ENST00000580127 EDNRBP24530 442 aa20.95■□□□□ 0.94
MKS1-209ENST00000580127 ADGRE1Q14246 886 aa20.95■□□□□ 0.94
MKS1-209ENST00000580127 NSUN6Q8TEA1 469 aaKnown RBP20.95■□□□□ 0.94
MKS1-209ENST00000580127 SLC9A7Q96T83 725 aa20.95■□□□□ 0.94
MKS1-209ENST00000580127 RWDD1Q9H446 243 aaPredicted RBP20.95■□□□□ 0.94
MKS1-209ENST00000580127 KAT14Q9H8E8 782 aa20.95■□□□□ 0.94
MKS1-209ENST00000580127 CHMP4BP1P59074 171 aa20.94■□□□□ 0.94
MKS1-209ENST00000580127 STXBP2Q15833 593 aa20.94■□□□□ 0.94
MKS1-209ENST00000580127 USH1GQ495M9 461 aa20.94■□□□□ 0.94
MKS1-209ENST00000580127 IWS1Q96ST2 819 aa20.94■□□□□ 0.94
MKS1-209ENST00000580127 LRRC37A2A6NM11 1700 aa20.94■□□□□ 0.94
MKS1-209ENST00000580127 ABCB11O95342 1321 aa20.94■□□□□ 0.94
MKS1-209ENST00000580127 EYSQ5T1H1 3165 aa20.94■□□□□ 0.94
MKS1-209ENST00000580127 GBF1Q92538 1859 aa20.93■□□□□ 0.94
MKS1-209ENST00000580127 HIP1O00291 1037 aa20.93■□□□□ 0.94
MKS1-209ENST00000580127 SDSP20132 328 aa20.93■□□□□ 0.94
MKS1-209ENST00000580127 CASTP20810 708 aaKnown RBP20.93■□□□□ 0.94
MKS1-209ENST00000580127 PNMA1Q8ND90 353 aa20.93■□□□□ 0.94
MKS1-209ENST00000580127 CRBNQ96SW2 442 aa20.93■□□□□ 0.94
MKS1-209ENST00000580127 CTNNA3Q9UI47 895 aa20.93■□□□□ 0.94
MKS1-209ENST00000580127 LCTP09848 1927 aa20.92■□□□□ 0.94
MKS1-209ENST00000580127 DHX16O60231 1041 aaKnown RBP20.92■□□□□ 0.94
MKS1-209ENST00000580127 PARNO95453 639 aaKnown RBP20.92■□□□□ 0.94
MKS1-209ENST00000580127 GH1P01241 217 aa20.92■□□□□ 0.94
MKS1-209ENST00000580127 IQCF3P0C7M6 154 aa20.92■□□□□ 0.94
MKS1-209ENST00000580127 GOLGA8HP0CJ92 632 aa20.92■□□□□ 0.94
MKS1-209ENST00000580127 PTGISQ16647 500 aa20.92■□□□□ 0.94
MKS1-209ENST00000580127 ASPRV1Q53RT3 343 aa20.92■□□□□ 0.94
MKS1-209ENST00000580127 ZNF589Q86UQ0 364 aaPredicted RBP20.92■□□□□ 0.94
MKS1-209ENST00000580127 ADAMTS19Q8TE59 1207 aa20.92■□□□□ 0.94
MKS1-209ENST00000580127 LNPKQ9C0E8 428 aa20.92■□□□□ 0.94
MKS1-209ENST00000580127 UBA5Q9GZZ9 404 aa20.92■□□□□ 0.94
MKS1-209ENST00000580127 DIAPH3Q9NSV4 1193 aa20.92■□□□□ 0.94
MKS1-209ENST00000580127 MRPL11Q9Y3B7 192 aaKnown RBP20.92■□□□□ 0.94
MKS1-209ENST00000580127 NCOR1O75376 2440 aa20.92■□□□□ 0.94
MKS1-209ENST00000580127 CDH23Q9H251 3354 aa20.91■□□□□ 0.94
MKS1-209ENST00000580127 BAIAP3O94812 1187 aa20.91■□□□□ 0.94
MKS1-209ENST00000580127 MYOGP15173 224 aa20.91■□□□□ 0.94
MKS1-209ENST00000580127 KCNJ6P48051 423 aa20.91■□□□□ 0.94
MKS1-209ENST00000580127 SKIV2LQ15477 1246 aaKnown RBP20.91■□□□□ 0.94
MKS1-209ENST00000580127 SEPT14Q6ZU15 432 aa20.91■□□□□ 0.94
MKS1-209ENST00000580127 MICALL1Q8N3F8 863 aa20.91■□□□□ 0.94
MKS1-209ENST00000580127 CAGE1Q8TC20 777 aa20.91■□□□□ 0.94
MKS1-209ENST00000580127 ZKSCAN3Q9BRR0 538 aa20.91■□□□□ 0.94
MKS1-209ENST00000580127 SCN10AQ9Y5Y9 1956 aa20.9■□□□□ 0.94
MKS1-209ENST00000580127 KDM4AO75164 1064 aa20.9■□□□□ 0.94
MKS1-209ENST00000580127 CDC37Q16543 378 aaPredicted RBP20.9■□□□□ 0.94
MKS1-209ENST00000580127 DGKDQ16760 1214 aa20.9■□□□□ 0.94
MKS1-209ENST00000580127 ADGRF4Q8IZF3 695 aa20.9■□□□□ 0.94
MKS1-209ENST00000580127 AFAP1L1Q8TED9 768 aa20.9■□□□□ 0.94
MKS1-209ENST00000580127 ANKS1AQ92625 1134 aa20.9■□□□□ 0.94
MKS1-209ENST00000580127 COPS5Q92905 334 aa20.9■□□□□ 0.94
MKS1-209ENST00000580127 UHRF1Q96T88 793 aaPredicted RBP20.9■□□□□ 0.94
MKS1-209ENST00000580127 RMDN3Q96TC7 470 aa20.9■□□□□ 0.94
MKS1-209ENST00000580127 KRT23Q9C075 422 aa20.9■□□□□ 0.94
MKS1-209ENST00000580127 EIF3JO75822 258 aaKnown RBP20.89■□□□□ 0.93
MKS1-209ENST00000580127 CA3P07451 260 aa20.89■□□□□ 0.93
MKS1-209ENST00000580127 PARP1P09874 1014 aaKnown RBP20.89■□□□□ 0.93
MKS1-209ENST00000580127 POU3F3P20264 500 aaPredicted RBP20.89■□□□□ 0.93
MKS1-209ENST00000580127 TRAF1Q13077 416 aa20.89■□□□□ 0.93
MKS1-209ENST00000580127 IMMTQ16891 758 aaKnown RBP20.89■□□□□ 0.93
MKS1-209ENST00000580127 ARHGEF16Q5VV41 709 aa20.89■□□□□ 0.93
MKS1-209ENST00000580127 CCDC62Q6P9F0 684 aa20.89■□□□□ 0.93
MKS1-209ENST00000580127 FBXO11Q86XK2 927 aa20.89■□□□□ 0.93
MKS1-209ENST00000580127 TBC1D10CQ8IV04 446 aa20.89■□□□□ 0.93
MKS1-209ENST00000580127 AFG1LQ8WV93 481 aa20.89■□□□□ 0.93
MKS1-209ENST00000580127 ZSCAN10Q96SZ4 725 aaPredicted RBP20.89■□□□□ 0.93
MKS1-209ENST00000580127 CNNM2Q9H8M5 875 aa20.89■□□□□ 0.93
MKS1-209ENST00000580127 LAMC2Q13753 1193 aa20.88■□□□□ 0.93
MKS1-209ENST00000580127 CWC27Q6UX04 472 aaKnown RBP20.88■□□□□ 0.93
MKS1-209ENST00000580127 CHST3Q7LGC8 479 aa20.88■□□□□ 0.93
MKS1-209ENST00000580127 HERC6Q8IVU3 1022 aa20.88■□□□□ 0.93
MKS1-209ENST00000580127 C7orf31Q8N865 590 aa20.88■□□□□ 0.93
MKS1-209ENST00000580127 SYTL5Q8TDW5 730 aaPredicted RBP20.88■□□□□ 0.93
MKS1-209ENST00000580127 TAAR1Q96RJ0 339 aa20.88■□□□□ 0.93
MKS1-209ENST00000580127 UBAC1Q9BSL1 405 aa20.88■□□□□ 0.93
MKS1-209ENST00000580127 ZBED2Q9BTP6 218 aa20.88■□□□□ 0.93
MKS1-209ENST00000580127 KATNAL1Q9BW62 490 aa20.88■□□□□ 0.93
MKS1-209ENST00000580127 VAT1LQ9HCJ6 419 aa20.88■□□□□ 0.93
MKS1-209ENST00000580127 MAP3K20Q9NYL2 800 aaKnown RBP20.88■□□□□ 0.93
MKS1-209ENST00000580127 VCANP13611 3396 aa20.88■□□□□ 0.93
MKS1-209ENST00000580127 TRIP12Q14669 1992 aaPredicted RBP20.87■□□□□ 0.93
MKS1-209ENST00000580127 LY6KQ17RY6 165 aa20.87■□□□□ 0.93
MKS1-209ENST00000580127 B4GALNT3Q6L9W6 998 aa20.87■□□□□ 0.93
MKS1-209ENST00000580127 KCNV1Q6PIU1 500 aa20.87■□□□□ 0.93
MKS1-209ENST00000580127 SESTD1Q86VW0 696 aa20.87■□□□□ 0.93
MKS1-209ENST00000580127 VWCEQ96DN2 955 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms