RNA–Protein interactions for RNA: ENST00000579814.1

LIMD2-208, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-208ENST00000579814 OPLAHO14841 1288 aa30.35■■■□□ 2.45
LIMD2-208ENST00000579814 RXRAP19793 462 aa30.35■■■□□ 2.45
LIMD2-208ENST00000579814 TMEM63BQ5T3F8 832 aa30.35■■■□□ 2.45
LIMD2-208ENST00000579814 PRDM5Q9NQX1 630 aaPredicted RBP30.35■■■□□ 2.45
LIMD2-208ENST00000579814 SEC63Q9UGP8 760 aaKnown RBP30.35■■■□□ 2.45
LIMD2-208ENST00000579814 GCOM1H8Y6P7 765 aaPredicted RBP30.34■■■□□ 2.45
LIMD2-208ENST00000579814 NKRFO15226 690 aaKnown RBP eCLIP30.34■■■□□ 2.45
LIMD2-208ENST00000579814 POLR2MP0CAP2 368 aa30.34■■■□□ 2.45
LIMD2-208ENST00000579814 HSPA4P34932 840 aa30.34■■■□□ 2.45
LIMD2-208ENST00000579814 PPP2R5BQ15173 497 aa30.34■■■□□ 2.45
LIMD2-208ENST00000579814 STXBP2Q15833 593 aa30.34■■■□□ 2.45
LIMD2-208ENST00000579814 FANCBQ8NB91 859 aa30.34■■■□□ 2.45
LIMD2-208ENST00000579814 KCNB2Q92953 911 aa30.34■■■□□ 2.45
LIMD2-208ENST00000579814 PQBP1O60828 265 aaKnown RBP30.33■■■□□ 2.45
LIMD2-208ENST00000579814 CABYRO75952 493 aa30.33■■■□□ 2.45
LIMD2-208ENST00000579814 MDM2Q00987 491 aaPredicted RBP30.33■■■□□ 2.45
LIMD2-208ENST00000579814 SRBD1Q8N5C6 995 aaKnown RBP30.33■■■□□ 2.45
LIMD2-208ENST00000579814 TCEANC2Q96MN5 208 aa30.33■■■□□ 2.45
LIMD2-208ENST00000579814 ALPK3Q96L96 1907 aa30.33■■■□□ 2.45
LIMD2-208ENST00000579814 PLEKHA8P1O95397 391 aa30.32■■■□□ 2.44
LIMD2-208ENST00000579814 EIF2AK2P19525 551 aaKnown RBP30.32■■■□□ 2.44
LIMD2-208ENST00000579814 PTGS1P23219 599 aa30.32■■■□□ 2.44
LIMD2-208ENST00000579814 TTLL4Q14679 1199 aa30.32■■■□□ 2.44
LIMD2-208ENST00000579814 MICU3Q86XE3 530 aa30.32■■■□□ 2.44
LIMD2-208ENST00000579814 RAB11FIP4Q86YS3 637 aa30.32■■■□□ 2.44
LIMD2-208ENST00000579814 TOX2Q96NM4 488 aa30.32■■■□□ 2.44
LIMD2-208ENST00000579814 UBE2OQ9C0C9 1292 aaKnown RBP30.32■■■□□ 2.44
LIMD2-208ENST00000579814 PXMP2Q9NR77 195 aa30.32■■■□□ 2.44
LIMD2-208ENST00000579814 MCM3APO60318 1980 aa30.32■■■□□ 2.44
LIMD2-208ENST00000579814 A0A0U1RQG5 324 aaPredicted RBP30.31■■■□□ 2.44
LIMD2-208ENST00000579814 DCDC2CA8MYV0 355 aa30.31■■■□□ 2.44
LIMD2-208ENST00000579814 NR3C2P08235 984 aa30.31■■■□□ 2.44
LIMD2-208ENST00000579814 TXNP10599 105 aaKnown RBP30.31■■■□□ 2.44
LIMD2-208ENST00000579814 HOXA13P31271 388 aaPredicted RBP30.31■■■□□ 2.44
LIMD2-208ENST00000579814 FGD1P98174 961 aa30.31■■■□□ 2.44
LIMD2-208ENST00000579814 CXCL17Q6UXB2 119 aa30.31■■■□□ 2.44
LIMD2-208ENST00000579814 SEPT14Q6ZU15 432 aa30.31■■■□□ 2.44
LIMD2-208ENST00000579814 ANKRD33Q7Z3H0 272 aa30.31■■■□□ 2.44
LIMD2-208ENST00000579814 OR6J1Q8NGC5 347 aa30.31■■■□□ 2.44
LIMD2-208ENST00000579814 PDLIM7Q9NR12 457 aa30.31■■■□□ 2.44
LIMD2-208ENST00000579814 EPB41L2O43491 1005 aaKnown RBP30.3■■■□□ 2.44
LIMD2-208ENST00000579814 EIF3JO75822 258 aaKnown RBP30.3■■■□□ 2.44
LIMD2-208ENST00000579814 CLTBP09497 229 aa30.3■■■□□ 2.44
LIMD2-208ENST00000579814 BRDTQ58F21 947 aaPredicted RBP30.3■■■□□ 2.44
LIMD2-208ENST00000579814 APOA5Q6Q788 366 aa30.3■■■□□ 2.44
LIMD2-208ENST00000579814 CMTR1Q8N1G2 835 aaKnown RBP30.3■■■□□ 2.44
LIMD2-208ENST00000579814 JAKMIP1Q96N16 626 aaKnown RBP30.3■■■□□ 2.44
LIMD2-208ENST00000579814 SNX14Q9Y5W7 946 aa30.3■■■□□ 2.44
LIMD2-208ENST00000579814 MROH7Q68CQ1 1323 aa30.29■■■□□ 2.44
LIMD2-208ENST00000579814 ARVCFO00192 962 aa30.29■■■□□ 2.44
LIMD2-208ENST00000579814 CPT1AP50416 773 aa30.29■■■□□ 2.44
LIMD2-208ENST00000579814 TMTC3Q6ZXV5 915 aa30.29■■■□□ 2.44
LIMD2-208ENST00000579814 RBM28Q9NW13 759 aaKnown RBP30.29■■■□□ 2.44
LIMD2-208ENST00000579814 ZBTB43O43298 467 aa30.28■■■□□ 2.44
LIMD2-208ENST00000579814 CDK7P50613 346 aa30.28■■■□□ 2.44
LIMD2-208ENST00000579814 FXR1P51114 621 aaKnown RBP eCLIP30.28■■■□□ 2.44
LIMD2-208ENST00000579814 SH3RF1Q7Z6J0 888 aa30.28■■■□□ 2.44
LIMD2-208ENST00000579814 FCHSD1Q86WN1 690 aa30.28■■■□□ 2.44
LIMD2-208ENST00000579814 CCDC82Q8N4S0 544 aa30.28■■■□□ 2.44
LIMD2-208ENST00000579814 TMEM39AQ9NV64 488 aa30.28■■■□□ 2.44
LIMD2-208ENST00000579814 PCDH10Q9P2E7 1040 aa30.28■■■□□ 2.44
LIMD2-208ENST00000579814 TRIM43BA6NCK2 446 aa30.27■■■□□ 2.44
LIMD2-208ENST00000579814 PSMA5P28066 241 aa30.27■■■□□ 2.44
LIMD2-208ENST00000579814 BLOC1S2Q6QNY1 142 aa30.27■■■□□ 2.44
LIMD2-208ENST00000579814 TRIM43Q96BQ3 446 aaPredicted RBP30.27■■■□□ 2.44
LIMD2-208ENST00000579814 PDCD2LQ9BRP1 358 aa30.27■■■□□ 2.44
LIMD2-208ENST00000579814 POLR3EQ9NVU0 708 aa30.27■■■□□ 2.44
LIMD2-208ENST00000579814 BRPF3Q9ULD4 1205 aa30.27■■■□□ 2.44
LIMD2-208ENST00000579814 MYCLP12524 364 aaPredicted RBP30.26■■■□□ 2.43
LIMD2-208ENST00000579814 FAAP100Q0VG06 881 aa30.26■■■□□ 2.43
LIMD2-208ENST00000579814 RTN1Q16799 776 aa30.26■■■□□ 2.43
LIMD2-208ENST00000579814 CCDC62Q6P9F0 684 aa30.26■■■□□ 2.43
LIMD2-208ENST00000579814 CUL5Q93034 780 aa30.26■■■□□ 2.43
LIMD2-208ENST00000579814 SEZ6LQ9BYH1 1024 aa30.26■■■□□ 2.43
LIMD2-208ENST00000579814 TRIOBPQ9H2D6 2365 aa30.25■■■□□ 2.43
LIMD2-208ENST00000579814 KLF18A0A0U1RQI7 1052 aa30.25■■■□□ 2.43
LIMD2-208ENST00000579814 KIAA0355O15063 1070 aa30.25■■■□□ 2.43
LIMD2-208ENST00000579814 ARIH2O95376 493 aa30.25■■■□□ 2.43
LIMD2-208ENST00000579814 SLC34A2O95436 690 aa30.25■■■□□ 2.43
LIMD2-208ENST00000579814 ITGA7Q13683 1181 aa30.25■■■□□ 2.43
LIMD2-208ENST00000579814 VSIG10LQ86VR7 867 aa30.25■■■□□ 2.43
LIMD2-208ENST00000579814 TDHQ8IZJ6 230 aa30.25■■■□□ 2.43
LIMD2-208ENST00000579814 COPS5Q92905 334 aa30.25■■■□□ 2.43
LIMD2-208ENST00000579814 LCTP09848 1927 aa30.25■■■□□ 2.43
LIMD2-208ENST00000579814 KPNA6O60684 536 aa30.24■■■□□ 2.43
LIMD2-208ENST00000579814 CPA1P15085 419 aa30.24■■■□□ 2.43
LIMD2-208ENST00000579814 RAG1P15918 1043 aa30.24■■■□□ 2.43
LIMD2-208ENST00000579814 PGM5Q15124 567 aa30.24■■■□□ 2.43
LIMD2-208ENST00000579814 SMARCC2Q8TAQ2 1214 aa30.24■■■□□ 2.43
LIMD2-208ENST00000579814 BADQ92934 168 aa30.24■■■□□ 2.43
LIMD2-208ENST00000579814 NAP1L2Q9ULW6 460 aaPredicted RBP30.24■■■□□ 2.43
LIMD2-208ENST00000579814 TLR3O15455 904 aaKnown RBP30.23■■■□□ 2.43
LIMD2-208ENST00000579814 GH1P01241 217 aa30.23■■■□□ 2.43
LIMD2-208ENST00000579814 MYL3P08590 195 aa30.23■■■□□ 2.43
LIMD2-208ENST00000579814 CCND2P30279 289 aa30.23■■■□□ 2.43
LIMD2-208ENST00000579814 RCAN1P53805 252 aa30.23■■■□□ 2.43
LIMD2-208ENST00000579814 LY6KQ17RY6 165 aa30.23■■■□□ 2.43
LIMD2-208ENST00000579814 Q6ZUG5 572 aa30.23■■■□□ 2.43
LIMD2-208ENST00000579814 SLC43A3Q8NBI5 491 aa30.23■■■□□ 2.43
LIMD2-208ENST00000579814 MRVI1Q9Y6F6 885 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms