RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 MUM1L1Q5H9M0 696 aa16.51■□□□□ 0.23
CSNK1D-211ENST00000579316 CEP85Q6P2H3 762 aa16.51■□□□□ 0.23
CSNK1D-211ENST00000579316 LRRC8DQ7L1W4 858 aa16.51■□□□□ 0.23
CSNK1D-211ENST00000579316 SESTD1Q86VW0 696 aa16.51■□□□□ 0.23
CSNK1D-211ENST00000579316 RHPN1Q8TCX5 695 aa16.51■□□□□ 0.23
CSNK1D-211ENST00000579316 CHURC1Q8WUH1 139 aa16.51■□□□□ 0.23
CSNK1D-211ENST00000579316 STAG1Q8WVM7 1258 aa16.51■□□□□ 0.23
CSNK1D-211ENST00000579316 GMCL1Q96IK5 515 aa16.51■□□□□ 0.23
CSNK1D-211ENST00000579316 PRRX2Q99811 253 aa16.51■□□□□ 0.23
CSNK1D-211ENST00000579316 C17orf80Q9BSJ5 609 aa16.51■□□□□ 0.23
CSNK1D-211ENST00000579316 ADD3Q9UEY8 706 aaKnown RBP16.51■□□□□ 0.23
CSNK1D-211ENST00000579316 NBNO60934 754 aa16.5■□□□□ 0.23
CSNK1D-211ENST00000579316 CHGBP05060 677 aa16.5■□□□□ 0.23
CSNK1D-211ENST00000579316 ALDH5A1P51649 535 aaPredicted RBP16.5■□□□□ 0.23
CSNK1D-211ENST00000579316 PTGISQ16647 500 aa16.5■□□□□ 0.23
CSNK1D-211ENST00000579316 HSP90AB4PQ58FF6 505 aa16.5■□□□□ 0.23
CSNK1D-211ENST00000579316 ZKSCAN2Q63HK3 967 aa16.5■□□□□ 0.23
CSNK1D-211ENST00000579316 GIMAP6Q6P9H5 292 aa16.5■□□□□ 0.23
CSNK1D-211ENST00000579316 SP7Q8TDD2 431 aaPredicted RBP16.5■□□□□ 0.23
CSNK1D-211ENST00000579316 PPP1R13LQ8WUF5 828 aa16.5■□□□□ 0.23
CSNK1D-211ENST00000579316 DHX38Q92620 1227 aaKnown RBP16.5■□□□□ 0.23
CSNK1D-211ENST00000579316 PURBQ96QR8 312 aaKnown RBP16.5■□□□□ 0.23
CSNK1D-211ENST00000579316 RIF1Q5UIP0 2472 aaKnown RBP16.5■□□□□ 0.23
CSNK1D-211ENST00000579316 MYO7AQ13402 2215 aa16.49■□□□□ 0.23
CSNK1D-211ENST00000579316 HTRA4P83105 476 aaPredicted RBP16.49■□□□□ 0.23
CSNK1D-211ENST00000579316 PKN1Q16512 942 aa16.49■□□□□ 0.23
CSNK1D-211ENST00000579316 CLASRPQ8N2M8 674 aaKnown RBP16.49■□□□□ 0.23
CSNK1D-211ENST00000579316 BANK1Q8NDB2 785 aa16.49■□□□□ 0.23
CSNK1D-211ENST00000579316 PUS7LQ9H0K6 701 aaKnown RBP16.49■□□□□ 0.23
CSNK1D-211ENST00000579316 INSL6Q9Y581 213 aa16.49■□□□□ 0.23
CSNK1D-211ENST00000579316 COL4A6Q14031 1691 aa16.49■□□□□ 0.23
CSNK1D-211ENST00000579316 TCF15Q12870 199 aa16.48■□□□□ 0.23
CSNK1D-211ENST00000579316 MKRN4PQ13434 485 aaPredicted RBP16.48■□□□□ 0.23
CSNK1D-211ENST00000579316 PPP2R5BQ15173 497 aa16.48■□□□□ 0.23
CSNK1D-211ENST00000579316 SMAD2Q15796 467 aaKnown RBP16.48■□□□□ 0.23
CSNK1D-211ENST00000579316 TCEAL5Q5H9L2 206 aa16.48■□□□□ 0.23
CSNK1D-211ENST00000579316 NSMFQ6X4W1 530 aa16.48■□□□□ 0.23
CSNK1D-211ENST00000579316 EDAQ92838 391 aa16.48■□□□□ 0.23
CSNK1D-211ENST00000579316 SAMD11Q96NU1 681 aa16.48■□□□□ 0.23
CSNK1D-211ENST00000579316 STRBPQ96SI9 672 aaKnown RBP16.48■□□□□ 0.23
CSNK1D-211ENST00000579316 CRBNQ96SW2 442 aa16.48■□□□□ 0.23
CSNK1D-211ENST00000579316 POP1Q99575 1024 aaKnown RBP16.48■□□□□ 0.23
CSNK1D-211ENST00000579316 ZNF287Q9HBT7 754 aa16.48■□□□□ 0.23
CSNK1D-211ENST00000579316 MUTYHQ9UIF7 546 aa16.48■□□□□ 0.23
CSNK1D-211ENST00000579316 MYO15AQ9UKN7 3530 aa16.48■□□□□ 0.23
CSNK1D-211ENST00000579316 MICAL3Q7RTP6 2002 aa16.47■□□□□ 0.23
CSNK1D-211ENST00000579316 GSG1L2A8MUP6 293 aa16.47■□□□□ 0.23
CSNK1D-211ENST00000579316 IFIT2P09913 472 aaKnown RBP16.47■□□□□ 0.23
CSNK1D-211ENST00000579316 ATP5JP18859 108 aa16.47■□□□□ 0.23
CSNK1D-211ENST00000579316 HNRNPUQ00839 825 aaKnown RBP eCLIP16.47■□□□□ 0.233e-18■□□□□ 9.1
CSNK1D-211ENST00000579316 IKBKEQ14164 716 aa16.47■□□□□ 0.23
CSNK1D-211ENST00000579316 IER5LQ5T953 404 aa16.47■□□□□ 0.23
CSNK1D-211ENST00000579316 GDF6Q6KF10 455 aaPredicted RBP16.47■□□□□ 0.23
CSNK1D-211ENST00000579316 NEDD1Q8NHV4 660 aa16.47■□□□□ 0.23
CSNK1D-211ENST00000579316 SCFD2Q8WU76 684 aa16.47■□□□□ 0.23
CSNK1D-211ENST00000579316 HAUS7Q99871 368 aa16.47■□□□□ 0.23
CSNK1D-211ENST00000579316 NSUN3Q9H649 340 aaKnown RBP16.47■□□□□ 0.23
CSNK1D-211ENST00000579316 H3BNC9 293 aa16.46■□□□□ 0.23
CSNK1D-211ENST00000579316 NCK2O43639 380 aa16.46■□□□□ 0.23
CSNK1D-211ENST00000579316 GFRA3O60609 400 aa16.46■□□□□ 0.23
CSNK1D-211ENST00000579316 ICAM1P05362 532 aa16.46■□□□□ 0.23
CSNK1D-211ENST00000579316 CKBP12277 381 aa16.46■□□□□ 0.23
CSNK1D-211ENST00000579316 EDNRBP24530 442 aa16.46■□□□□ 0.23
CSNK1D-211ENST00000579316 LTBRP36941 435 aa16.46■□□□□ 0.23
CSNK1D-211ENST00000579316 SLC1A4P43007 532 aa16.46■□□□□ 0.23
CSNK1D-211ENST00000579316 BAATQ14032 418 aaPredicted RBP16.46■□□□□ 0.23
CSNK1D-211ENST00000579316 EPC2Q52LR7 807 aa16.46■□□□□ 0.23
CSNK1D-211ENST00000579316 ZSCAN25Q6NSZ9 544 aa16.46■□□□□ 0.23
CSNK1D-211ENST00000579316 FAM117BQ6P1L5 589 aa16.46■□□□□ 0.23
CSNK1D-211ENST00000579316 TRAF7Q6Q0C0 670 aa16.46■□□□□ 0.23
CSNK1D-211ENST00000579316 RNF135Q8IUD6 432 aa16.46■□□□□ 0.23
CSNK1D-211ENST00000579316 ZNF444Q8N0Y2 327 aaPredicted RBP16.46■□□□□ 0.23
CSNK1D-211ENST00000579316 STK11IPQ8N1F8 1099 aa16.46■□□□□ 0.23
CSNK1D-211ENST00000579316 BOLA2Q9H3K6 86 aa16.46■□□□□ 0.23
CSNK1D-211ENST00000579316 CCPG1Q9ULG6 757 aa16.46■□□□□ 0.23
CSNK1D-211ENST00000579316 PRR12Q9ULL5 1215 aa16.46■□□□□ 0.23
CSNK1D-211ENST00000579316 FAM186AA6NE01 2351 aa16.45■□□□□ 0.22
CSNK1D-211ENST00000579316 MINDY4BA8MYZ0 360 aa16.45■□□□□ 0.22
CSNK1D-211ENST00000579316 PRDM1O75626 825 aa16.45■□□□□ 0.22
CSNK1D-211ENST00000579316 IKQ13123 557 aaPredicted RBP16.45■□□□□ 0.22
CSNK1D-211ENST00000579316 CTC1Q2NKJ3 1217 aa16.45■□□□□ 0.22
CSNK1D-211ENST00000579316 KIF1BPQ96EK5 621 aa16.45■□□□□ 0.22
CSNK1D-211ENST00000579316 ALG13Q9NP73 1137 aaKnown RBP16.45■□□□□ 0.22
CSNK1D-211ENST00000579316 ISY1Q9ULR0 285 aaKnown RBP16.45■□□□□ 0.22
CSNK1D-211ENST00000579316 KMT2EQ8IZD2 1858 aa16.45■□□□□ 0.22
CSNK1D-211ENST00000579316 MCCP23508 829 aa16.44■□□□□ 0.22
CSNK1D-211ENST00000579316 SNAP25P60880 206 aa16.44■□□□□ 0.22
CSNK1D-211ENST00000579316 MBTPS1Q14703 1052 aa16.44■□□□□ 0.22
CSNK1D-211ENST00000579316 ITPRIPQ8IWB1 547 aa16.44■□□□□ 0.22
CSNK1D-211ENST00000579316 KAT2BQ92831 832 aa16.44■□□□□ 0.22
CSNK1D-211ENST00000579316 COPS5Q92905 334 aa16.44■□□□□ 0.22
CSNK1D-211ENST00000579316 CLDND1Q9NY35 253 aa16.44■□□□□ 0.22
CSNK1D-211ENST00000579316 TMEM221A6NGB7 291 aa16.43■□□□□ 0.22
CSNK1D-211ENST00000579316 M0R296 226 aa16.43■□□□□ 0.22
CSNK1D-211ENST00000579316 NFIBO00712 420 aa16.43■□□□□ 0.22
CSNK1D-211ENST00000579316 GPM6BQ13491 265 aa16.43■□□□□ 0.22
CSNK1D-211ENST00000579316 TRIM71Q2Q1W2 868 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-211ENST00000579316 RCSD1Q6JBY9 416 aa16.43■□□□□ 0.22
CSNK1D-211ENST00000579316 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.43■□□□□ 0.22
CSNK1D-211ENST00000579316 TRIM67Q6ZTA4 783 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms