RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 MFAP1P55081 439 aaKnown RBP10.46□□□□□ -0.73
GGA3-207ENST00000578896 IRX6P78412 446 aaPredicted RBP10.46□□□□□ -0.73
GGA3-207ENST00000578896 PURAQ00577 322 aaKnown RBP10.46□□□□□ -0.73
GGA3-207ENST00000578896 ADGRE1Q14246 886 aa10.46□□□□□ -0.73
GGA3-207ENST00000578896 PPP2R5BQ15173 497 aa10.46□□□□□ -0.73
GGA3-207ENST00000578896 CCDC85BQ15834 202 aaPredicted RBP10.46□□□□□ -0.73
GGA3-207ENST00000578896 QRICH1Q2TAL8 776 aa10.46□□□□□ -0.73
GGA3-207ENST00000578896 PSRC1Q6PGN9 363 aaPredicted RBP10.46□□□□□ -0.73
GGA3-207ENST00000578896 SEPT14Q6ZU15 432 aa10.46□□□□□ -0.73
GGA3-207ENST00000578896 CHST3Q7LGC8 479 aa10.46□□□□□ -0.73
GGA3-207ENST00000578896 DGKHQ86XP1 1220 aa10.46□□□□□ -0.73
GGA3-207ENST00000578896 ENAHQ8N8S7 591 aaPredicted RBP10.46□□□□□ -0.73
GGA3-207ENST00000578896 SYTL5Q8TDW5 730 aaPredicted RBP10.46□□□□□ -0.73
GGA3-207ENST00000578896 HERVK_113Q902F9 699 aa10.46□□□□□ -0.73
GGA3-207ENST00000578896 ZSCAN10Q96SZ4 725 aaPredicted RBP10.46□□□□□ -0.73
GGA3-207ENST00000578896 MTG1Q9BT17 334 aaPredicted RBP10.46□□□□□ -0.73
GGA3-207ENST00000578896 TNKSO95271 1327 aa10.46□□□□□ -0.73
GGA3-207ENST00000578896 WDR19Q8NEZ3 1342 aa10.46□□□□□ -0.73
GGA3-207ENST00000578896 LAMA4Q16363 1823 aa10.46□□□□□ -0.74
GGA3-207ENST00000578896 TMEM265A0A087WTH1 108 aa10.45□□□□□ -0.74
GGA3-207ENST00000578896 SORBS3O60504 671 aa10.45□□□□□ -0.74
GGA3-207ENST00000578896 PCP11498 1178 aaKnown RBP10.45□□□□□ -0.74
GGA3-207ENST00000578896 CPT1AP50416 773 aa10.45□□□□□ -0.74
GGA3-207ENST00000578896 TTLL4Q14679 1199 aa10.45□□□□□ -0.74
GGA3-207ENST00000578896 LY6KQ17RY6 165 aa10.45□□□□□ -0.74
GGA3-207ENST00000578896 GPATCH4Q5T3I0 446 aaKnown RBP10.45□□□□□ -0.74
GGA3-207ENST00000578896 CYB5R4Q7L1T6 521 aa10.45□□□□□ -0.74
GGA3-207ENST00000578896 IQCA1Q86XH1 822 aa10.45□□□□□ -0.74
GGA3-207ENST00000578896 STAG2Q8N3U4 1231 aa10.45□□□□□ -0.74
GGA3-207ENST00000578896 ZFP91Q96JP5 570 aaPredicted RBP10.45□□□□□ -0.74
GGA3-207ENST00000578896 JMJD4Q9H9V9 463 aa10.45□□□□□ -0.74
GGA3-207ENST00000578896 GPHNQ9NQX3 736 aaPredicted RBP10.45□□□□□ -0.74
GGA3-207ENST00000578896 POLR3EQ9NVU0 708 aa10.45□□□□□ -0.74
GGA3-207ENST00000578896 SUPT16HQ9Y5B9 1047 aaKnown RBP10.45□□□□□ -0.74
GGA3-207ENST00000578896 BRWD1Q9NSI6 2320 aa10.45□□□□□ -0.74
GGA3-207ENST00000578896 KIAA1217Q5T5P2 1943 aa10.45□□□□□ -0.74
GGA3-207ENST00000578896 PARP1P09874 1014 aaKnown RBP10.44□□□□□ -0.74
GGA3-207ENST00000578896 GSPT1P15170 499 aaKnown RBP10.44□□□□□ -0.74
GGA3-207ENST00000578896 EIF2AK2P19525 551 aaKnown RBP10.44□□□□□ -0.74
GGA3-207ENST00000578896 IGFBP4P22692 258 aa10.44□□□□□ -0.74
GGA3-207ENST00000578896 IMMTQ16891 758 aaKnown RBP10.44□□□□□ -0.74
GGA3-207ENST00000578896 TICAM2Q86XR7 235 aa10.44□□□□□ -0.74
GGA3-207ENST00000578896 DNERQ8NFT8 737 aa10.44□□□□□ -0.74
GGA3-207ENST00000578896 SCFD2Q8WU76 684 aa10.44□□□□□ -0.74
GGA3-207ENST00000578896 AFG1LQ8WV93 481 aa10.44□□□□□ -0.74
GGA3-207ENST00000578896 ANKS1AQ92625 1134 aa10.44□□□□□ -0.74
GGA3-207ENST00000578896 DSCC1Q9BVC3 393 aa10.44□□□□□ -0.74
GGA3-207ENST00000578896 SENP2Q9HC62 589 aa10.44□□□□□ -0.74
GGA3-207ENST00000578896 MSRAQ9UJ68 235 aa10.44□□□□□ -0.74
GGA3-207ENST00000578896 TAF6LQ9Y6J9 622 aa10.44□□□□□ -0.74
GGA3-207ENST00000578896 TCF20Q9UGU0 1960 aaKnown RBP10.44□□□□□ -0.74
GGA3-207ENST00000578896 REV3LO60673 3130 aa10.44□□□□□ -0.74
GGA3-207ENST00000578896 ABCB11O95342 1321 aa10.43□□□□□ -0.74
GGA3-207ENST00000578896 MUC3AQ02505 3323 aa10.43□□□□□ -0.74
GGA3-207ENST00000578896 A6NJR5 290 aa10.43□□□□□ -0.74
GGA3-207ENST00000578896 RFXAPO00287 272 aa10.43□□□□□ -0.74
GGA3-207ENST00000578896 PPP1R11O60927 126 aaPredicted RBP10.43□□□□□ -0.74
GGA3-207ENST00000578896 CFBP00751 764 aa10.43□□□□□ -0.74
GGA3-207ENST00000578896 PTH1RQ03431 593 aa10.43□□□□□ -0.74
GGA3-207ENST00000578896 AAMPQ13685 434 aa10.43□□□□□ -0.74
GGA3-207ENST00000578896 SLC35G1Q2M3R5 365 aa10.43□□□□□ -0.74
GGA3-207ENST00000578896 IFIT1BQ5T764 474 aaKnown RBP10.43□□□□□ -0.74
GGA3-207ENST00000578896 CCDC62Q6P9F0 684 aa10.43□□□□□ -0.74
GGA3-207ENST00000578896 FBXO11Q86XK2 927 aa10.43□□□□□ -0.74
GGA3-207ENST00000578896 RPUSD2Q8IZ73 545 aaKnown RBP10.43□□□□□ -0.74
GGA3-207ENST00000578896 RMDN3Q96TC7 470 aa10.43□□□□□ -0.74
GGA3-207ENST00000578896 GAS2L1Q99501 681 aaPredicted RBP10.43□□□□□ -0.74
GGA3-207ENST00000578896 UBAC1Q9BSL1 405 aa10.43□□□□□ -0.74
GGA3-207ENST00000578896 CERS4Q9HA82 394 aa10.43□□□□□ -0.74
GGA3-207ENST00000578896 SLC4A7Q9Y6M7 1214 aa10.43□□□□□ -0.74
GGA3-207ENST00000578896 LOC102724159A0A0B4J2E5 919 aa10.42□□□□□ -0.74
GGA3-207ENST00000578896 HIP1O00291 1037 aa10.42□□□□□ -0.74
GGA3-207ENST00000578896 OPLAHO14841 1288 aa10.42□□□□□ -0.74
GGA3-207ENST00000578896 NKRFO15226 690 aaKnown RBP eCLIP10.42□□□□□ -0.74
GGA3-207ENST00000578896 MMP3P08254 477 aa10.42□□□□□ -0.74
GGA3-207ENST00000578896 SUPT20HL2P0C7V6 817 aa10.42□□□□□ -0.74
GGA3-207ENST00000578896 HOXA13P31271 388 aaPredicted RBP10.42□□□□□ -0.74
GGA3-207ENST00000578896 ARHGAP1Q07960 439 aa10.42□□□□□ -0.74
GGA3-207ENST00000578896 PWP2Q15269 919 aaKnown RBP10.42□□□□□ -0.74
GGA3-207ENST00000578896 SEC23AQ15436 765 aa10.42□□□□□ -0.74
GGA3-207ENST00000578896 RAB30Q15771 203 aa10.42□□□□□ -0.74
GGA3-207ENST00000578896 ASPRV1Q53RT3 343 aa10.42□□□□□ -0.74
GGA3-207ENST00000578896 BRDTQ58F21 947 aaPredicted RBP10.42□□□□□ -0.74
GGA3-207ENST00000578896 CCDC178Q5BJE1 867 aa10.42□□□□□ -0.74
GGA3-207ENST00000578896 TTC22Q5TAA0 569 aa10.42□□□□□ -0.74
GGA3-207ENST00000578896 ARHGEF16Q5VV41 709 aa10.42□□□□□ -0.74
GGA3-207ENST00000578896 GDF6Q6KF10 455 aaPredicted RBP10.42□□□□□ -0.74
GGA3-207ENST00000578896 HOMER1Q86YM7 354 aa10.42□□□□□ -0.74
GGA3-207ENST00000578896 MICALL1Q8N3F8 863 aa10.42□□□□□ -0.74
GGA3-207ENST00000578896 RGS22Q8NE09 1264 aa10.42□□□□□ -0.74
GGA3-207ENST00000578896 PIBF1Q8WXW3 757 aa10.42□□□□□ -0.74
GGA3-207ENST00000578896 KAT2BQ92831 832 aa10.42□□□□□ -0.74
GGA3-207ENST00000578896 MPHOSPH6Q99547 160 aaKnown RBP10.42□□□□□ -0.74
GGA3-207ENST00000578896 KRT23Q9C075 422 aa10.42□□□□□ -0.74
GGA3-207ENST00000578896 FTOQ9C0B1 505 aaKnown RBP eCLIP10.42□□□□□ -0.74
GGA3-207ENST00000578896 MTIF3Q9H2K0 278 aaKnown RBP10.42□□□□□ -0.74
GGA3-207ENST00000578896 SLC28A3Q9HAS3 691 aa10.42□□□□□ -0.74
GGA3-207ENST00000578896 CTNNA3Q9UI47 895 aa10.42□□□□□ -0.74
GGA3-207ENST00000578896 PNMA2Q9UL42 364 aa10.42□□□□□ -0.74
GGA3-207ENST00000578896 RAD50Q92878 1312 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms