RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 SLFN13Q68D06 897 aa11.95□□□□□ -0.5
RNF43-203ENST00000577716 USP17L1Q7RTZ2 530 aa11.95□□□□□ -0.5
RNF43-203ENST00000577716 HOMER3Q9NSC5 361 aa11.95□□□□□ -0.5
RNF43-203ENST00000577716 ABHD10Q9NUJ1 306 aa11.95□□□□□ -0.5
RNF43-203ENST00000577716 TRIM49BA6NDI0 452 aa11.95□□□□□ -0.5
RNF43-203ENST00000577716 IRX5P78411 483 aaPredicted RBP11.95□□□□□ -0.5
RNF43-203ENST00000577716 SGMS1Q86VZ5 419 aa11.95□□□□□ -0.5
RNF43-203ENST00000577716 KIFC2Q96AC6 838 aa11.95□□□□□ -0.5
RNF43-203ENST00000577716 MORC2Q9Y6X9 1032 aaPredicted RBP11.95□□□□□ -0.5
RNF43-203ENST00000577716 CD163L1Q9NR16 1453 aa11.95□□□□□ -0.5
RNF43-203ENST00000577716 BUB1BO60566 1050 aaPredicted RBP11.95□□□□□ -0.5
RNF43-203ENST00000577716 MECOMQ03112 1051 aa11.95□□□□□ -0.5
RNF43-203ENST00000577716 GPATCH4Q5T3I0 446 aaKnown RBP11.95□□□□□ -0.5
RNF43-203ENST00000577716 KIAA0825Q8IV33 1275 aa11.95□□□□□ -0.5
RNF43-203ENST00000577716 JDP2Q8WYK2 163 aa11.95□□□□□ -0.5
RNF43-203ENST00000577716 FAM184BQ9ULE4 1060 aa11.95□□□□□ -0.5
RNF43-203ENST00000577716 BZW2Q9Y6E2 419 aaKnown RBP11.95□□□□□ -0.5
RNF43-203ENST00000577716 LMTK3Q96Q04 1460 aa11.95□□□□□ -0.5
RNF43-203ENST00000577716 ALX1Q15699 326 aa11.95□□□□□ -0.5
RNF43-203ENST00000577716 ASPRV1Q53RT3 343 aa11.95□□□□□ -0.5
RNF43-203ENST00000577716 METTL16Q86W50 562 aaKnown RBP11.95□□□□□ -0.5
RNF43-203ENST00000577716 DGKHQ86XP1 1220 aa11.95□□□□□ -0.5
RNF43-203ENST00000577716 ENAHQ8N8S7 591 aaPredicted RBP11.95□□□□□ -0.5
RNF43-203ENST00000577716 PPFIBP2Q8ND30 876 aa11.95□□□□□ -0.5
RNF43-203ENST00000577716 ISCA1Q9BUE6 129 aa11.95□□□□□ -0.5
RNF43-203ENST00000577716 KCNQ4P56696 695 aa11.94□□□□□ -0.5
RNF43-203ENST00000577716 MRPS25P82663 173 aaKnown RBP11.94□□□□□ -0.5
RNF43-203ENST00000577716 SLC7A5Q01650 507 aa11.94□□□□□ -0.5
RNF43-203ENST00000577716 ICA1Q05084 483 aa11.94□□□□□ -0.5
RNF43-203ENST00000577716 STRN3Q13033 797 aa11.94□□□□□ -0.5
RNF43-203ENST00000577716 CERKLQ49MI3 558 aaPredicted RBP11.94□□□□□ -0.5
RNF43-203ENST00000577716 HHATQ5VTY9 493 aa11.94□□□□□ -0.5
RNF43-203ENST00000577716 MCTP2Q6DN12 878 aa11.94□□□□□ -0.5
RNF43-203ENST00000577716 SPATS2Q86XZ4 545 aaKnown RBP11.94□□□□□ -0.5
RNF43-203ENST00000577716 PPM1KQ8N3J5 372 aa11.94□□□□□ -0.5
RNF43-203ENST00000577716 CEP63Q96MT8 703 aa11.94□□□□□ -0.5
RNF43-203ENST00000577716 WDR24Q96S15 920 aa11.94□□□□□ -0.5
RNF43-203ENST00000577716 MAK16Q9BXY0 300 aaKnown RBP11.94□□□□□ -0.5
RNF43-203ENST00000577716 LGALS16A8MUM7 142 aa11.94□□□□□ -0.5
RNF43-203ENST00000577716 STX2P32856 288 aa11.94□□□□□ -0.5
RNF43-203ENST00000577716 CLNS1AP54105 237 aaKnown RBP11.94□□□□□ -0.5
RNF43-203ENST00000577716 CHURC1Q8WUH1 139 aa11.94□□□□□ -0.5
RNF43-203ENST00000577716 BRIP1Q9BX63 1249 aa11.94□□□□□ -0.5
RNF43-203ENST00000577716 LEMD3Q9Y2U8 911 aa11.94□□□□□ -0.5
RNF43-203ENST00000577716 PCDHA13Q9Y5I0 950 aa11.94□□□□□ -0.5
RNF43-203ENST00000577716 PALLDQ8WX93 1383 aa11.94□□□□□ -0.5
RNF43-203ENST00000577716 GSG1L2A8MUP6 293 aa11.94□□□□□ -0.5
RNF43-203ENST00000577716 DKC1O60832 514 aaKnown RBP eCLIP11.94□□□□□ -0.53e-13■□□□□ 8.8
RNF43-203ENST00000577716 PRCPP42785 496 aa11.94□□□□□ -0.5
RNF43-203ENST00000577716 FYB2Q5VWT5 728 aa11.94□□□□□ -0.5
RNF43-203ENST00000577716 MIER3Q7Z3K6 550 aa11.94□□□□□ -0.5
RNF43-203ENST00000577716 FAM133AQ8N9E0 248 aa11.94□□□□□ -0.5
RNF43-203ENST00000577716 CCDC127Q96BQ5 260 aa11.94□□□□□ -0.5
RNF43-203ENST00000577716 IRX2Q9BZI1 471 aaPredicted RBP11.94□□□□□ -0.5
RNF43-203ENST00000577716 RNF14Q9UBS8 474 aa11.94□□□□□ -0.5
RNF43-203ENST00000577716 ADAMTS1Q9UHI8 967 aa11.94□□□□□ -0.5
RNF43-203ENST00000577716 RABGAP1Q9Y3P9 1069 aa11.94□□□□□ -0.5
RNF43-203ENST00000577716 PPLO60437 1756 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 IFNB1P01574 187 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 CD19P15391 556 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 TNNI1P19237 187 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 SLC16A2P36021 539 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 TRPC3Q13507 836 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 MTF1Q14872 753 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 STMN2Q93045 179 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 IWS1Q96ST2 819 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 XDHP47989 1333 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 SRGAP2O75044 1071 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 PCK1P35558 622 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 IFT88Q13099 833 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 DOK7Q18PE1 504 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 ODR4Q5SWX8 454 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 MAIP1Q8WWC4 291 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 AMNQ9BXJ7 453 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 COL3A1P02461 1466 aaPredicted RBP11.93□□□□□ -0.5
RNF43-203ENST00000577716 SPATA31A3Q5VYP0 1347 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 TADA3O75528 432 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 FOSP01100 380 aaPredicted RBP11.93□□□□□ -0.5
RNF43-203ENST00000577716 GCFC2P16383 781 aaKnown RBP11.93□□□□□ -0.5
RNF43-203ENST00000577716 MTA3Q9BTC8 594 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 NEURL4Q96JN8 1562 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 AGLP35573 1532 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 PREX1Q8TCU6 1659 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 ANKRD65E5RJM6 399 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 K7ENM7 598 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 TBC1D8O95759 1140 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 MYCNP04198 464 aaPredicted RBP11.93□□□□□ -0.5
RNF43-203ENST00000577716 CYP2D6P10635 497 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 BRINP3Q76B58 766 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 MAGOHBQ96A72 148 aaKnown RBP11.93□□□□□ -0.5
RNF43-203ENST00000577716 EMILIN3Q9NT22 766 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 SERPINB13Q9UIV8 391 aa11.93□□□□□ -0.5
RNF43-203ENST00000577716 PGRMC1O00264 195 aaKnown RBP11.92□□□□□ -0.5
RNF43-203ENST00000577716 PRDX5P30044 214 aa11.92□□□□□ -0.5
RNF43-203ENST00000577716 GUCY1A2P33402 732 aa11.92□□□□□ -0.5
RNF43-203ENST00000577716 ZNF131P52739 623 aa11.92□□□□□ -0.5
RNF43-203ENST00000577716 KCTD1Q719H9 257 aa11.92□□□□□ -0.5
RNF43-203ENST00000577716 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.92□□□□□ -0.5
RNF43-203ENST00000577716 THRAP3Q9Y2W1 955 aaKnown RBP11.92□□□□□ -0.5
RNF43-203ENST00000577716 PTPRUQ92729 1446 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms