RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 CLEC4DQ8WXI8 215 aa16.64■□□□□ 0.25
SMARCD2-205ENST00000577686 RILPL2Q969X0 211 aa16.64■□□□□ 0.25
SMARCD2-205ENST00000577686 FAM227BQ96M60 508 aa16.64■□□□□ 0.25
SMARCD2-205ENST00000577686 FTOQ9C0B1 505 aaKnown RBP eCLIP16.64■□□□□ 0.25
SMARCD2-205ENST00000577686 KAT14Q9H8E8 782 aa16.64■□□□□ 0.25
SMARCD2-205ENST00000577686 DDX49Q9Y6V7 483 aaKnown RBP16.64■□□□□ 0.25
SMARCD2-205ENST00000577686 ABCB11O95342 1321 aa16.64■□□□□ 0.25
SMARCD2-205ENST00000577686 LAMA2P24043 3122 aaKnown RBP16.63■□□□□ 0.25
SMARCD2-205ENST00000577686 A6NJR5 290 aa16.63■□□□□ 0.25
SMARCD2-205ENST00000577686 ZNF213O14771 459 aa16.63■□□□□ 0.25
SMARCD2-205ENST00000577686 BAIAP3O94812 1187 aa16.63■□□□□ 0.25
SMARCD2-205ENST00000577686 PARNO95453 639 aaKnown RBP16.63■□□□□ 0.25
SMARCD2-205ENST00000577686 SNHG28P0DPA3 235 aa16.63■□□□□ 0.25
SMARCD2-205ENST00000577686 KCNJ6P48051 423 aa16.63■□□□□ 0.25
SMARCD2-205ENST00000577686 NMIQ13287 307 aaPredicted RBP16.63■□□□□ 0.25
SMARCD2-205ENST00000577686 SKIV2LQ15477 1246 aaKnown RBP16.63■□□□□ 0.25
SMARCD2-205ENST00000577686 USH1GQ495M9 461 aa16.63■□□□□ 0.25
SMARCD2-205ENST00000577686 MICALL1Q8N3F8 863 aa16.63■□□□□ 0.25
SMARCD2-205ENST00000577686 CAGE1Q8TC20 777 aa16.63■□□□□ 0.25
SMARCD2-205ENST00000577686 ADAMTS19Q8TE59 1207 aa16.63■□□□□ 0.25
SMARCD2-205ENST00000577686 UHRF1Q96T88 793 aaPredicted RBP16.63■□□□□ 0.25
SMARCD2-205ENST00000577686 HIP1O00291 1037 aa16.62■□□□□ 0.25
SMARCD2-205ENST00000577686 DHX16O60231 1041 aaKnown RBP16.62■□□□□ 0.25
SMARCD2-205ENST00000577686 GH1P01241 217 aa16.62■□□□□ 0.25
SMARCD2-205ENST00000577686 RABGGTBP53611 331 aa16.62■□□□□ 0.25
SMARCD2-205ENST00000577686 ADGRE1Q14246 886 aa16.62■□□□□ 0.25
SMARCD2-205ENST00000577686 ASPRV1Q53RT3 343 aa16.62■□□□□ 0.25
SMARCD2-205ENST00000577686 NSUN6Q8TEA1 469 aaKnown RBP16.62■□□□□ 0.25
SMARCD2-205ENST00000577686 KATNAL1Q9BW62 490 aa16.62■□□□□ 0.25
SMARCD2-205ENST00000577686 DIAPH3Q9NSV4 1193 aa16.62■□□□□ 0.25
SMARCD2-205ENST00000577686 CASTP20810 708 aaKnown RBP16.61■□□□□ 0.25
SMARCD2-205ENST00000577686 PTGS1P23219 599 aa16.61■□□□□ 0.25
SMARCD2-205ENST00000577686 STXBP2Q15833 593 aa16.61■□□□□ 0.25
SMARCD2-205ENST00000577686 CDC37Q16543 378 aaPredicted RBP16.61■□□□□ 0.25
SMARCD2-205ENST00000577686 TMEM63BQ5T3F8 832 aa16.61■□□□□ 0.25
SMARCD2-205ENST00000577686 PNMA1Q8ND90 353 aa16.61■□□□□ 0.25
SMARCD2-205ENST00000577686 AFAP1L1Q8TED9 768 aa16.61■□□□□ 0.25
SMARCD2-205ENST00000577686 IWS1Q96ST2 819 aa16.61■□□□□ 0.25
SMARCD2-205ENST00000577686 MRPL11Q9Y3B7 192 aaKnown RBP16.61■□□□□ 0.25
SMARCD2-205ENST00000577686 CA3P07451 260 aa16.6■□□□□ 0.25
SMARCD2-205ENST00000577686 IQCF3P0C7M6 154 aa16.6■□□□□ 0.25
SMARCD2-205ENST00000577686 CHMP4BP1P59074 171 aa16.6■□□□□ 0.25
SMARCD2-205ENST00000577686 TRAF1Q13077 416 aa16.6■□□□□ 0.25
SMARCD2-205ENST00000577686 PTGISQ16647 500 aa16.6■□□□□ 0.25
SMARCD2-205ENST00000577686 ZNF589Q86UQ0 364 aaPredicted RBP16.6■□□□□ 0.25
SMARCD2-205ENST00000577686 RWDD1Q9H446 243 aaPredicted RBP16.6■□□□□ 0.25
SMARCD2-205ENST00000577686 CTNNA3Q9UI47 895 aa16.6■□□□□ 0.25
SMARCD2-205ENST00000577686 EFCAB14O75071 495 aa16.59■□□□□ 0.25
SMARCD2-205ENST00000577686 DGKDQ16760 1214 aa16.59■□□□□ 0.25
SMARCD2-205ENST00000577686 IMMTQ16891 758 aaKnown RBP16.59■□□□□ 0.25
SMARCD2-205ENST00000577686 ARHGEF16Q5VV41 709 aa16.59■□□□□ 0.25
SMARCD2-205ENST00000577686 SESTD1Q86VW0 696 aa16.59■□□□□ 0.25
SMARCD2-205ENST00000577686 FBXO11Q86XK2 927 aa16.59■□□□□ 0.25
SMARCD2-205ENST00000577686 TBC1D10CQ8IV04 446 aa16.59■□□□□ 0.25
SMARCD2-205ENST00000577686 CRBNQ96SW2 442 aa16.59■□□□□ 0.25
SMARCD2-205ENST00000577686 UBAC1Q9BSL1 405 aa16.59■□□□□ 0.25
SMARCD2-205ENST00000577686 KRT23Q9C075 422 aa16.59■□□□□ 0.25
SMARCD2-205ENST00000577686 CNNM2Q9H8M5 875 aa16.59■□□□□ 0.25
SMARCD2-205ENST00000577686 COG5Q9UP83 839 aa16.59■□□□□ 0.25
SMARCD2-205ENST00000577686 MMP3P08254 477 aa16.58■□□□□ 0.24
SMARCD2-205ENST00000577686 PARP1P09874 1014 aaKnown RBP16.58■□□□□ 0.24
SMARCD2-205ENST00000577686 GOLGA8HP0CJ92 632 aa16.58■□□□□ 0.24
SMARCD2-205ENST00000577686 MYOGP15173 224 aa16.58■□□□□ 0.24
SMARCD2-205ENST00000577686 SDSP20132 328 aa16.58■□□□□ 0.24
SMARCD2-205ENST00000577686 POU3F3P20264 500 aaPredicted RBP16.58■□□□□ 0.24
SMARCD2-205ENST00000577686 SEPT14Q6ZU15 432 aa16.58■□□□□ 0.24
SMARCD2-205ENST00000577686 HERC6Q8IVU3 1022 aa16.58■□□□□ 0.24
SMARCD2-205ENST00000577686 C7orf31Q8N865 590 aa16.58■□□□□ 0.24
SMARCD2-205ENST00000577686 COPS5Q92905 334 aa16.58■□□□□ 0.24
SMARCD2-205ENST00000577686 ZSCAN10Q96SZ4 725 aaPredicted RBP16.58■□□□□ 0.24
SMARCD2-205ENST00000577686 RMDN3Q96TC7 470 aa16.58■□□□□ 0.24
SMARCD2-205ENST00000577686 ZKSCAN3Q9BRR0 538 aa16.58■□□□□ 0.24
SMARCD2-205ENST00000577686 LNPKQ9C0E8 428 aa16.58■□□□□ 0.24
SMARCD2-205ENST00000577686 UBA5Q9GZZ9 404 aa16.58■□□□□ 0.24
SMARCD2-205ENST00000577686 LCTP09848 1927 aa16.57■□□□□ 0.24
SMARCD2-205ENST00000577686 NEDD4P46934 1319 aa16.57■□□□□ 0.24
SMARCD2-205ENST00000577686 TLL1O43897 1013 aa16.57■□□□□ 0.24
SMARCD2-205ENST00000577686 KDM4AO75164 1064 aa16.57■□□□□ 0.24
SMARCD2-205ENST00000577686 SELPP16109 830 aa16.57■□□□□ 0.24
SMARCD2-205ENST00000577686 KCNV1Q6PIU1 500 aa16.57■□□□□ 0.24
SMARCD2-205ENST00000577686 SYTL5Q8TDW5 730 aaPredicted RBP16.57■□□□□ 0.24
SMARCD2-205ENST00000577686 AFG1LQ8WV93 481 aa16.57■□□□□ 0.24
SMARCD2-205ENST00000577686 ZBED2Q9BTP6 218 aa16.57■□□□□ 0.24
SMARCD2-205ENST00000577686 EIF3JO75822 258 aaKnown RBP16.56■□□□□ 0.24
SMARCD2-205ENST00000577686 COL9A1P20849 921 aa16.56■□□□□ 0.24
SMARCD2-205ENST00000577686 LAMC2Q13753 1193 aa16.56■□□□□ 0.24
SMARCD2-205ENST00000577686 CCDC62Q6P9F0 684 aa16.56■□□□□ 0.24
SMARCD2-205ENST00000577686 LRRC8DQ7L1W4 858 aa16.56■□□□□ 0.24
SMARCD2-205ENST00000577686 CHST3Q7LGC8 479 aa16.56■□□□□ 0.24
SMARCD2-205ENST00000577686 ADGRF4Q8IZF3 695 aa16.56■□□□□ 0.24
SMARCD2-205ENST00000577686 SAMD3Q8N6K7 520 aa16.56■□□□□ 0.24
SMARCD2-205ENST00000577686 ARNTL2Q8WYA1 636 aa16.56■□□□□ 0.24
SMARCD2-205ENST00000577686 ANKS1AQ92625 1134 aa16.56■□□□□ 0.24
SMARCD2-205ENST00000577686 AMNQ9BXJ7 453 aa16.56■□□□□ 0.24
SMARCD2-205ENST00000577686 MAP3K20Q9NYL2 800 aaKnown RBP16.56■□□□□ 0.24
SMARCD2-205ENST00000577686 MRVI1Q9Y6F6 885 aa16.56■□□□□ 0.24
SMARCD2-205ENST00000577686 SCN10AQ9Y5Y9 1956 aa16.55■□□□□ 0.24
SMARCD2-205ENST00000577686 TTC28Q96AY4 2481 aa16.55■□□□□ 0.24
SMARCD2-205ENST00000577686 ARIH2O95376 493 aa16.55■□□□□ 0.24
SMARCD2-205ENST00000577686 ARHGAP1Q07960 439 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms