RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 TRIP12Q14669 1992 aaPredicted RBP17.39■□□□□ 0.37
MKS1-205ENST00000577315 A6NJR5 290 aa17.38■□□□□ 0.37
MKS1-205ENST00000577315 KLRF2D3W0D1 207 aa17.38■□□□□ 0.37
MKS1-205ENST00000577315 IFIT3O14879 490 aaKnown RBP17.38■□□□□ 0.37
MKS1-205ENST00000577315 CSF2RAP15509 400 aa17.38■□□□□ 0.37
MKS1-205ENST00000577315 IRX6P78412 446 aaPredicted RBP17.38■□□□□ 0.37
MKS1-205ENST00000577315 PTH1RQ03431 593 aa17.38■□□□□ 0.37
MKS1-205ENST00000577315 STXBP2Q15833 593 aa17.38■□□□□ 0.37
MKS1-205ENST00000577315 TMEM240Q5SV17 173 aa17.38■□□□□ 0.37
MKS1-205ENST00000577315 CYB5R4Q7L1T6 521 aa17.38■□□□□ 0.37
MKS1-205ENST00000577315 MTMR8Q96EF0 704 aa17.38■□□□□ 0.37
MKS1-205ENST00000577315 IL23AQ9NPF7 189 aa17.38■□□□□ 0.37
MKS1-205ENST00000577315 LAMA2P24043 3122 aaKnown RBP17.37■□□□□ 0.37
MKS1-205ENST00000577315 PALM3A6NDB9 673 aaPredicted RBP17.37■□□□□ 0.37
MKS1-205ENST00000577315 ZBTB5O15062 677 aa17.37■□□□□ 0.37
MKS1-205ENST00000577315 B4GALT4O60513 344 aa17.37■□□□□ 0.37
MKS1-205ENST00000577315 MYL3P08590 195 aa17.37■□□□□ 0.37
MKS1-205ENST00000577315 PTGS1P23219 599 aa17.37■□□□□ 0.37
MKS1-205ENST00000577315 CYP2C18P33260 490 aa17.37■□□□□ 0.37
MKS1-205ENST00000577315 PSMC6P62333 389 aa17.37■□□□□ 0.37
MKS1-205ENST00000577315 GHRHRQ02643 423 aa17.37■□□□□ 0.37
MKS1-205ENST00000577315 PTPN11Q06124 597 aaPredicted RBP17.37■□□□□ 0.37
MKS1-205ENST00000577315 WTAPQ15007 396 aa17.37■□□□□ 0.37
MKS1-205ENST00000577315 ARHGEF16Q5VV41 709 aa17.37■□□□□ 0.37
MKS1-205ENST00000577315 RPUSD2Q8IZ73 545 aaKnown RBP17.37■□□□□ 0.37
MKS1-205ENST00000577315 STAG2Q8N3U4 1231 aa17.37■□□□□ 0.37
MKS1-205ENST00000577315 MAP4K1Q92918 833 aa17.37■□□□□ 0.37
MKS1-205ENST00000577315 FAM161BQ96MY7 647 aa17.37■□□□□ 0.37
MKS1-205ENST00000577315 TAAR1Q96RJ0 339 aa17.37■□□□□ 0.37
MKS1-205ENST00000577315 RMDN3Q96TC7 470 aa17.37■□□□□ 0.37
MKS1-205ENST00000577315 ALDH8A1Q9H2A2 487 aaPredicted RBP17.37■□□□□ 0.37
MKS1-205ENST00000577315 MAD2L2Q9UI95 211 aa17.37■□□□□ 0.37
MKS1-205ENST00000577315 E7EWF7 191 aa17.36■□□□□ 0.37
MKS1-205ENST00000577315 GRM4Q14833 912 aa17.36■□□□□ 0.37
MKS1-205ENST00000577315 RASIP1Q5U651 963 aa17.36■□□□□ 0.37
MKS1-205ENST00000577315 NFRKBQ6P4R8 1299 aa17.36■□□□□ 0.37
MKS1-205ENST00000577315 ZNF365Q70YC5 407 aa17.36■□□□□ 0.37
MKS1-205ENST00000577315 C16orf59Q7L2K0 433 aa17.36■□□□□ 0.37
MKS1-205ENST00000577315 TBC1D5Q92609 795 aa17.36■□□□□ 0.37
MKS1-205ENST00000577315 MTA3Q9BTC8 594 aa17.36■□□□□ 0.37
MKS1-205ENST00000577315 NOC4LQ9BVI4 516 aaKnown RBP17.36■□□□□ 0.37
MKS1-205ENST00000577315 GBF1Q92538 1859 aa17.35■□□□□ 0.37
MKS1-205ENST00000577315 EIF3JO75822 258 aaKnown RBP17.35■□□□□ 0.37
MKS1-205ENST00000577315 CFBP00751 764 aa17.35■□□□□ 0.37
MKS1-205ENST00000577315 GH1P01241 217 aa17.35■□□□□ 0.37
MKS1-205ENST00000577315 FGBP02675 491 aa17.35■□□□□ 0.37
MKS1-205ENST00000577315 HSD17B4P51659 736 aa17.35■□□□□ 0.37
MKS1-205ENST00000577315 CCDC62Q6P9F0 684 aa17.35■□□□□ 0.37
MKS1-205ENST00000577315 HERVK_113Q902F9 699 aa17.35■□□□□ 0.37
MKS1-205ENST00000577315 CDX2Q99626 313 aaPredicted RBP17.35■□□□□ 0.37
MKS1-205ENST00000577315 TRPV6Q9H1D0 765 aa17.35■□□□□ 0.37
MKS1-205ENST00000577315 RIOX1Q9H6W3 641 aa17.35■□□□□ 0.37
MKS1-205ENST00000577315 COL20A1Q9P218 1284 aa17.35■□□□□ 0.37
MKS1-205ENST00000577315 PCDHA1Q9Y5I3 950 aa17.35■□□□□ 0.37
MKS1-205ENST00000577315 NR3C2P08235 984 aa17.34■□□□□ 0.37
MKS1-205ENST00000577315 PFKMP08237 780 aa17.34■□□□□ 0.37
MKS1-205ENST00000577315 ACRP10323 421 aa17.34■□□□□ 0.37
MKS1-205ENST00000577315 SCN5AQ14524 2016 aa17.34■□□□□ 0.37
MKS1-205ENST00000577315 SEPT14Q6ZU15 432 aa17.34■□□□□ 0.37
MKS1-205ENST00000577315 CATIPQ7Z7H3 387 aa17.34■□□□□ 0.37
MKS1-205ENST00000577315 COPS5Q92905 334 aa17.34■□□□□ 0.37
MKS1-205ENST00000577315 TTYH1Q9H313 450 aaPredicted RBP17.34■□□□□ 0.37
MKS1-205ENST00000577315 PXMP2Q9NR77 195 aa17.34■□□□□ 0.37
MKS1-205ENST00000577315 TANC1Q9C0D5 1861 aa17.33■□□□□ 0.37
MKS1-205ENST00000577315 ARIH2O95376 493 aa17.33■□□□□ 0.36
MKS1-205ENST00000577315 CASTP20810 708 aaKnown RBP17.33■□□□□ 0.36
MKS1-205ENST00000577315 DNAJB2P25686 324 aa17.33■□□□□ 0.36
MKS1-205ENST00000577315 TROAPQ12815 778 aa17.33■□□□□ 0.36
MKS1-205ENST00000577315 NBPF20Q3BBV1 942 aa17.33■□□□□ 0.36
MKS1-205ENST00000577315 FAM47CQ5HY64 1035 aa17.33■□□□□ 0.36
MKS1-205ENST00000577315 TMEM67Q5HYA8 995 aa17.33■□□□□ 0.36
MKS1-205ENST00000577315 KCNV1Q6PIU1 500 aa17.33■□□□□ 0.36
MKS1-205ENST00000577315 MAP3K14Q99558 947 aa17.33■□□□□ 0.36
MKS1-205ENST00000577315 RBM8AQ9Y5S9 174 aaKnown RBP17.33■□□□□ 0.36
MKS1-205ENST00000577315 PNMA6FA0A0J9YX94 578 aa17.32■□□□□ 0.36
MKS1-205ENST00000577315 EIF2AK2P19525 551 aaKnown RBP17.32■□□□□ 0.36
MKS1-205ENST00000577315 CCL23P55773 120 aa17.32■□□□□ 0.36
MKS1-205ENST00000577315 RAB30Q15771 203 aa17.32■□□□□ 0.36
MKS1-205ENST00000577315 LY6KQ17RY6 165 aa17.32■□□□□ 0.36
MKS1-205ENST00000577315 CASC1Q6TDU7 716 aa17.32■□□□□ 0.36
MKS1-205ENST00000577315 STOX1Q6ZVD7 989 aa17.32■□□□□ 0.36
MKS1-205ENST00000577315 HOMER1Q86YM7 354 aa17.32■□□□□ 0.36
MKS1-205ENST00000577315 TMTC2Q8N394 836 aa17.32■□□□□ 0.36
MKS1-205ENST00000577315 EMID1Q96A84 441 aaPredicted RBP17.32■□□□□ 0.36
MKS1-205ENST00000577315 TIFAQ96CG3 184 aa17.32■□□□□ 0.36
MKS1-205ENST00000577315 TRMT13Q9NUP7 481 aaKnown RBP17.32■□□□□ 0.36
MKS1-205ENST00000577315 DDX41Q9UJV9 622 aaKnown RBP17.32■□□□□ 0.36
MKS1-205ENST00000577315 MRVI1Q9Y6F6 885 aa17.32■□□□□ 0.36
MKS1-205ENST00000577315 UMODL1Q5DID0 1318 aa17.31■□□□□ 0.36
MKS1-205ENST00000577315 GCOM1H8Y6P7 765 aaPredicted RBP17.31■□□□□ 0.36
MKS1-205ENST00000577315 PITPNM1O00562 1244 aa17.31■□□□□ 0.36
MKS1-205ENST00000577315 OPLAHO14841 1288 aa17.31■□□□□ 0.36
MKS1-205ENST00000577315 MMP3P08254 477 aa17.31■□□□□ 0.36
MKS1-205ENST00000577315 POLR2MP0CAP2 368 aa17.31■□□□□ 0.36
MKS1-205ENST00000577315 SMARCA1P28370 1054 aa17.31■□□□□ 0.36
MKS1-205ENST00000577315 RFC2P35250 354 aa17.31■□□□□ 0.36
MKS1-205ENST00000577315 ARHGAP1Q07960 439 aa17.31■□□□□ 0.36
MKS1-205ENST00000577315 BFSP2Q13515 415 aa17.31■□□□□ 0.36
MKS1-205ENST00000577315 LAMC2Q13753 1193 aa17.31■□□□□ 0.36
MKS1-205ENST00000577315 DGKDQ16760 1214 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms