RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 DEFB103AP81534 67 aa11.96□□□□□ -0.49
NPLOC4-220ENST00000576940 PTGISQ16647 500 aa11.96□□□□□ -0.49
NPLOC4-220ENST00000576940 TCTN1Q2MV58 587 aa11.96□□□□□ -0.49
NPLOC4-220ENST00000576940 BRDTQ58F21 947 aaPredicted RBP11.96□□□□□ -0.49
NPLOC4-220ENST00000576940 RNF207Q6ZRF8 634 aa11.96□□□□□ -0.49
NPLOC4-220ENST00000576940 CLEC4DQ8WXI8 215 aa11.96□□□□□ -0.49
NPLOC4-220ENST00000576940 CTAGE1Q96RT6 745 aa11.96□□□□□ -0.49
NPLOC4-220ENST00000576940 GPCPD1Q9NPB8 672 aa11.96□□□□□ -0.49
NPLOC4-220ENST00000576940 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.96□□□□□ -0.49
NPLOC4-220ENST00000576940 FRMPD2Q68DX3 1309 aaPredicted RBP11.95□□□□□ -0.5
NPLOC4-220ENST00000576940 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.95□□□□□ -0.5
NPLOC4-220ENST00000576940 RANBP6O60518 1105 aaKnown RBP11.95□□□□□ -0.5
NPLOC4-220ENST00000576940 KPNA6O60684 536 aa11.95□□□□□ -0.5
NPLOC4-220ENST00000576940 BAIAP3O94812 1187 aa11.95□□□□□ -0.5
NPLOC4-220ENST00000576940 ARIH2O95376 493 aa11.95□□□□□ -0.5
NPLOC4-220ENST00000576940 RPS6P62753 249 aaKnown RBP11.95□□□□□ -0.5
NPLOC4-220ENST00000576940 PTPN11Q06124 597 aaPredicted RBP11.95□□□□□ -0.5
NPLOC4-220ENST00000576940 PDE4DQ08499 809 aa11.95□□□□□ -0.5
NPLOC4-220ENST00000576940 PPP2R5BQ15173 497 aa11.95□□□□□ -0.5
NPLOC4-220ENST00000576940 SYDE2Q5VT97 1194 aa11.95□□□□□ -0.5
NPLOC4-220ENST00000576940 GDF6Q6KF10 455 aaPredicted RBP11.95□□□□□ -0.5
NPLOC4-220ENST00000576940 BTNL9Q6UXG8 535 aa11.95□□□□□ -0.5
NPLOC4-220ENST00000576940 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.95□□□□□ -0.5
NPLOC4-220ENST00000576940 LMCD1Q9NZU5 365 aa11.95□□□□□ -0.5
NPLOC4-220ENST00000576940 SCN10AQ9Y5Y9 1956 aa11.95□□□□□ -0.5
NPLOC4-220ENST00000576940 BRWD1Q9NSI6 2320 aa11.95□□□□□ -0.5
NPLOC4-220ENST00000576940 PTPRSQ13332 1948 aa11.94□□□□□ -0.5
NPLOC4-220ENST00000576940 NKRFO15226 690 aaKnown RBP eCLIP11.94□□□□□ -0.5
NPLOC4-220ENST00000576940 FOXP2O15409 715 aa11.94□□□□□ -0.5
NPLOC4-220ENST00000576940 NBNO60934 754 aa11.94□□□□□ -0.5
NPLOC4-220ENST00000576940 IL9P15248 144 aa11.94□□□□□ -0.5
NPLOC4-220ENST00000576940 NOVP48745 357 aa11.94□□□□□ -0.5
NPLOC4-220ENST00000576940 PPP4R3BQ5MIZ7 849 aa11.94□□□□□ -0.5
NPLOC4-220ENST00000576940 C20orf194Q5TEA3 1177 aa11.94□□□□□ -0.5
NPLOC4-220ENST00000576940 FAM117BQ6P1L5 589 aa11.94□□□□□ -0.5
NPLOC4-220ENST00000576940 FAM178BQ8IXR5 827 aa11.94□□□□□ -0.5
NPLOC4-220ENST00000576940 GJD3Q8N144 294 aa11.94□□□□□ -0.5
NPLOC4-220ENST00000576940 SCFD2Q8WU76 684 aa11.94□□□□□ -0.5
NPLOC4-220ENST00000576940 DCAF4Q8WV16 495 aa11.94□□□□□ -0.5
NPLOC4-220ENST00000576940 DHX38Q92620 1227 aaKnown RBP11.94□□□□□ -0.5
NPLOC4-220ENST00000576940 TMEM47Q9BQJ4 181 aa11.94□□□□□ -0.5
NPLOC4-220ENST00000576940 DCTPP1Q9H773 170 aa11.94□□□□□ -0.5
NPLOC4-220ENST00000576940 UBE2ZQ9H832 354 aaPredicted RBP11.94□□□□□ -0.5
NPLOC4-220ENST00000576940 MUC6Q6W4X9 2439 aa11.94□□□□□ -0.5
NPLOC4-220ENST00000576940 RAD50Q92878 1312 aa11.93□□□□□ -0.5
NPLOC4-220ENST00000576940 LOC102724159A0A0B4J2E5 919 aa11.93□□□□□ -0.5
NPLOC4-220ENST00000576940 LINC01553A4QN01 128 aa11.93□□□□□ -0.5
NPLOC4-220ENST00000576940 GJB5O95377 273 aa11.93□□□□□ -0.5
NPLOC4-220ENST00000576940 SELPP16109 830 aa11.93□□□□□ -0.5
NPLOC4-220ENST00000576940 KCNA5P22460 613 aa11.93□□□□□ -0.5
NPLOC4-220ENST00000576940 EDNRBP24530 442 aa11.93□□□□□ -0.5
NPLOC4-220ENST00000576940 ERVK-21P61565 698 aa11.93□□□□□ -0.5
NPLOC4-220ENST00000576940 PWP2Q15269 919 aaKnown RBP11.93□□□□□ -0.5
NPLOC4-220ENST00000576940 LY6KQ17RY6 165 aa11.93□□□□□ -0.5
NPLOC4-220ENST00000576940 LRRFIP1Q32MZ4 808 aaKnown RBP11.93□□□□□ -0.5
NPLOC4-220ENST00000576940 ZMYM1Q5SVZ6 1142 aa11.93□□□□□ -0.5
NPLOC4-220ENST00000576940 VPS53Q5VIR6 699 aa11.93□□□□□ -0.5
NPLOC4-220ENST00000576940 LRRC8DQ7L1W4 858 aa11.93□□□□□ -0.5
NPLOC4-220ENST00000576940 CHST3Q7LGC8 479 aa11.93□□□□□ -0.5
NPLOC4-220ENST00000576940 CAGE1Q8TC20 777 aa11.93□□□□□ -0.5
NPLOC4-220ENST00000576940 AFAP1L1Q8TED9 768 aa11.93□□□□□ -0.5
NPLOC4-220ENST00000576940 AFG1LQ8WV93 481 aa11.93□□□□□ -0.5
NPLOC4-220ENST00000576940 TBC1D5Q92609 795 aa11.93□□□□□ -0.5
NPLOC4-220ENST00000576940 KAT2BQ92831 832 aa11.93□□□□□ -0.5
NPLOC4-220ENST00000576940 GPATCH3Q96I76 525 aa11.93□□□□□ -0.5
NPLOC4-220ENST00000576940 RAD9AQ99638 391 aa11.93□□□□□ -0.5
NPLOC4-220ENST00000576940 CHMP4BQ9H444 224 aaKnown RBP11.93□□□□□ -0.5
NPLOC4-220ENST00000576940 PRR33A8MZF0 331 aa11.92□□□□□ -0.5
NPLOC4-220ENST00000576940 CXCL10P02778 98 aa11.92□□□□□ -0.5
NPLOC4-220ENST00000576940 CKBP12277 381 aa11.92□□□□□ -0.5
NPLOC4-220ENST00000576940 SSTR3P32745 418 aaPredicted RBP11.92□□□□□ -0.5
NPLOC4-220ENST00000576940 LEXMQ3ZCV2 418 aa11.92□□□□□ -0.5
NPLOC4-220ENST00000576940 CCDC62Q6P9F0 684 aa11.92□□□□□ -0.5
NPLOC4-220ENST00000576940 CNKSR3Q6P9H4 555 aa11.92□□□□□ -0.5
NPLOC4-220ENST00000576940 SEPT14Q6ZU15 432 aa11.92□□□□□ -0.5
NPLOC4-220ENST00000576940 DNERQ8NFT8 737 aa11.92□□□□□ -0.5
NPLOC4-220ENST00000576940 OTUD7AQ8TE49 926 aaPredicted RBP11.92□□□□□ -0.5
NPLOC4-220ENST00000576940 UIMC1Q96RL1 719 aa11.92□□□□□ -0.5
NPLOC4-220ENST00000576940 TGS1Q96RS0 853 aaKnown RBP11.92□□□□□ -0.5
NPLOC4-220ENST00000576940 FSD1Q9BTV5 496 aa11.92□□□□□ -0.5
NPLOC4-220ENST00000576940 TOMM22Q9NS69 142 aa11.92□□□□□ -0.5
NPLOC4-220ENST00000576940 HDAC6Q9UBN7 1215 aa11.92□□□□□ -0.5
NPLOC4-220ENST00000576940 MMP3P08254 477 aa11.91□□□□□ -0.5
NPLOC4-220ENST00000576940 TOP1P11387 765 aaKnown RBP11.91□□□□□ -0.5
NPLOC4-220ENST00000576940 ZNF200P98182 395 aaPredicted RBP11.91□□□□□ -0.5
NPLOC4-220ENST00000576940 RRP12Q5JTH9 1297 aaKnown RBP11.91□□□□□ -0.5
NPLOC4-220ENST00000576940 PTCRAQ6ISU1 281 aaPredicted RBP11.91□□□□□ -0.5
NPLOC4-220ENST00000576940 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.91□□□□□ -0.5
NPLOC4-220ENST00000576940 CCDC155Q8N6L0 562 aa11.91□□□□□ -0.5
NPLOC4-220ENST00000576940 PI4K2BQ8TCG2 481 aa11.91□□□□□ -0.5
NPLOC4-220ENST00000576940 TAAR1Q96RJ0 339 aa11.91□□□□□ -0.5
NPLOC4-220ENST00000576940 MPHOSPH6Q99547 160 aaKnown RBP11.91□□□□□ -0.5
NPLOC4-220ENST00000576940 C17orf80Q9BSJ5 609 aa11.91□□□□□ -0.5
NPLOC4-220ENST00000576940 ALG1Q9BT22 464 aa11.91□□□□□ -0.5
NPLOC4-220ENST00000576940 COL4A4P53420 1690 aaPredicted RBP11.91□□□□□ -0.5
NPLOC4-220ENST00000576940 ABHD14A-ACY1A0A1B0GW23 586 aa11.9□□□□□ -0.5
NPLOC4-220ENST00000576940 GRXCR2A6NFK2 248 aa11.9□□□□□ -0.5
NPLOC4-220ENST00000576940 H3BQ06 376 aaPredicted RBP11.9□□□□□ -0.5
NPLOC4-220ENST00000576940 ORC4O43929 436 aa11.9□□□□□ -0.5
NPLOC4-220ENST00000576940 FGRP09769 529 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms