RNA–Protein interactions for RNA: ENST00000576788.1

TRAP1-217, Transcript of TNF receptor associated protein 1, humanhuman

TSL 4

Gene TRAP1, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-217ENST00000576788 TTLL4Q14679 1199 aa11.34□□□□□ -0.59
TRAP1-217ENST00000576788 DUSP28Q4G0W2 176 aa11.34□□□□□ -0.59
TRAP1-217ENST00000576788 CCSAPQ6IQ19 270 aaPredicted RBP11.34□□□□□ -0.59
TRAP1-217ENST00000576788 ZNF654Q8IZM8 581 aa11.34□□□□□ -0.59
TRAP1-217ENST00000576788 RGS22Q8NE09 1264 aa11.34□□□□□ -0.59
TRAP1-217ENST00000576788 MORC4Q8TE76 937 aa11.34□□□□□ -0.59
TRAP1-217ENST00000576788 TBC1D5Q92609 795 aa11.34□□□□□ -0.59
TRAP1-217ENST00000576788 TOX2Q96NM4 488 aa11.34□□□□□ -0.59
TRAP1-217ENST00000576788 TAAR1Q96RJ0 339 aa11.34□□□□□ -0.59
TRAP1-217ENST00000576788 RMDN3Q96TC7 470 aa11.34□□□□□ -0.59
TRAP1-217ENST00000576788 MYL10Q9BUA6 226 aa11.34□□□□□ -0.59
TRAP1-217ENST00000576788 PPP1R12CQ9BZL4 782 aa11.34□□□□□ -0.59
TRAP1-217ENST00000576788 SEC63Q9UGP8 760 aaKnown RBP11.34□□□□□ -0.59
TRAP1-217ENST00000576788 Q9Y3F1 56 aa11.34□□□□□ -0.59
TRAP1-217ENST00000576788 KIAA0355O15063 1070 aa11.33□□□□□ -0.6
TRAP1-217ENST00000576788 NKRFO15226 690 aaKnown RBP eCLIP11.33□□□□□ -0.6
TRAP1-217ENST00000576788 MYCLP12524 364 aaPredicted RBP11.33□□□□□ -0.6
TRAP1-217ENST00000576788 HSPA4P34932 840 aa11.33□□□□□ -0.6
TRAP1-217ENST00000576788 LIFRP42702 1097 aa11.33□□□□□ -0.6
TRAP1-217ENST00000576788 PSMC6P62333 389 aa11.33□□□□□ -0.6
TRAP1-217ENST00000576788 STXBP2Q15833 593 aa11.33□□□□□ -0.6
TRAP1-217ENST00000576788 LRIT3Q3SXY7 679 aa11.33□□□□□ -0.6
TRAP1-217ENST00000576788 FAM47CQ5HY64 1035 aa11.33□□□□□ -0.6
TRAP1-217ENST00000576788 TMEM63BQ5T3F8 832 aa11.33□□□□□ -0.6
TRAP1-217ENST00000576788 ANKRD33Q7Z3H0 272 aa11.33□□□□□ -0.6
TRAP1-217ENST00000576788 RASEFQ8IZ41 740 aa11.33□□□□□ -0.6
TRAP1-217ENST00000576788 TMTC2Q8N394 836 aa11.33□□□□□ -0.6
TRAP1-217ENST00000576788 DEFB123Q8N688 67 aa11.33□□□□□ -0.6
TRAP1-217ENST00000576788 SYTL5Q8TDW5 730 aaPredicted RBP11.33□□□□□ -0.6
TRAP1-217ENST00000576788 KCNB2Q92953 911 aa11.33□□□□□ -0.6
TRAP1-217ENST00000576788 MTMR8Q96EF0 704 aa11.33□□□□□ -0.6
TRAP1-217ENST00000576788 NEK1Q96PY6 1258 aa11.33□□□□□ -0.6
TRAP1-217ENST00000576788 PIGSQ96S52 555 aa11.33□□□□□ -0.6
TRAP1-217ENST00000576788 MAP3K14Q99558 947 aa11.33□□□□□ -0.6
TRAP1-217ENST00000576788 POLR3EQ9NVU0 708 aa11.33□□□□□ -0.6
TRAP1-217ENST00000576788 CTAGE5O15320 804 aa11.32□□□□□ -0.6
TRAP1-217ENST00000576788 EPB41L2O43491 1005 aaKnown RBP11.32□□□□□ -0.6
TRAP1-217ENST00000576788 HOXA13P31271 388 aaPredicted RBP11.32□□□□□ -0.6
TRAP1-217ENST00000576788 SHHQ15465 462 aa11.32□□□□□ -0.6
TRAP1-217ENST00000576788 SLC35G1Q2M3R5 365 aa11.32□□□□□ -0.6
TRAP1-217ENST00000576788 ADCK5Q3MIX3 580 aa11.32□□□□□ -0.6
TRAP1-217ENST00000576788 SYNE3Q6ZMZ3 975 aa11.32□□□□□ -0.6
TRAP1-217ENST00000576788 SGMS1Q86VZ5 419 aa11.32□□□□□ -0.6
TRAP1-217ENST00000576788 FCHSD1Q86WN1 690 aa11.32□□□□□ -0.6
TRAP1-217ENST00000576788 COPS5Q92905 334 aa11.32□□□□□ -0.6
TRAP1-217ENST00000576788 RRP36Q96EU6 259 aaKnown RBP11.32□□□□□ -0.6
TRAP1-217ENST00000576788 RNPC3Q96LT9 517 aaKnown RBP11.32□□□□□ -0.6
TRAP1-217ENST00000576788 IWS1Q96ST2 819 aa11.32□□□□□ -0.6
TRAP1-217ENST00000576788 LRRC2Q9BYS8 371 aa11.32□□□□□ -0.6
TRAP1-217ENST00000576788 MAF1Q9H063 256 aa11.32□□□□□ -0.6
TRAP1-217ENST00000576788 RIOX1Q9H6W3 641 aa11.32□□□□□ -0.6
TRAP1-217ENST00000576788 NAP1L2Q9ULW6 460 aaPredicted RBP11.32□□□□□ -0.6
TRAP1-217ENST00000576788 SZT2Q5T011 3432 aa11.32□□□□□ -0.6
TRAP1-217ENST00000576788 PNMA6FA0A0J9YX94 578 aa11.31□□□□□ -0.6
TRAP1-217ENST00000576788 GCOM1H8Y6P7 765 aaPredicted RBP11.31□□□□□ -0.6
TRAP1-217ENST00000576788 CYTH3O43739 400 aa11.31□□□□□ -0.6
TRAP1-217ENST00000576788 PPP1R11O60927 126 aaPredicted RBP11.31□□□□□ -0.6
TRAP1-217ENST00000576788 TIMP1P01033 207 aa11.31□□□□□ -0.6
TRAP1-217ENST00000576788 HMGB1P09429 215 aaKnown RBP11.31□□□□□ -0.6
TRAP1-217ENST00000576788 POLR2MP0CAP2 368 aa11.31□□□□□ -0.6
TRAP1-217ENST00000576788 CALM1P0DP23 149 aa11.31□□□□□ -0.6
TRAP1-217ENST00000576788 CALM2P0DP24 149 aa11.31□□□□□ -0.6
TRAP1-217ENST00000576788 CALM3P0DP25 149 aa11.31□□□□□ -0.6
TRAP1-217ENST00000576788 RXRAP19793 462 aa11.31□□□□□ -0.6
TRAP1-217ENST00000576788 EDNRBP24530 442 aa11.31□□□□□ -0.6
TRAP1-217ENST00000576788 ITGB8P26012 769 aa11.31□□□□□ -0.6
TRAP1-217ENST00000576788 GNAQP50148 359 aa11.31□□□□□ -0.6
TRAP1-217ENST00000576788 CDK7P50613 346 aa11.31□□□□□ -0.6
TRAP1-217ENST00000576788 FGD1P98174 961 aa11.31□□□□□ -0.6
TRAP1-217ENST00000576788 EXOSC10Q01780 885 aaKnown RBP11.31□□□□□ -0.6
TRAP1-217ENST00000576788 PPIGQ13427 754 aaKnown RBP eCLIP11.31□□□□□ -0.61e-8■□□□□ 8.5
TRAP1-217ENST00000576788 LY6KQ17RY6 165 aa11.31□□□□□ -0.6
TRAP1-217ENST00000576788 C9orf50Q5SZB4 431 aa11.31□□□□□ -0.6
TRAP1-217ENST00000576788 Q7L0L9 218 aa11.31□□□□□ -0.6
TRAP1-217ENST00000576788 DHX32Q7L7V1 743 aaKnown RBP11.31□□□□□ -0.6
TRAP1-217ENST00000576788 RAB11FIP4Q86YS3 637 aa11.31□□□□□ -0.6
TRAP1-217ENST00000576788 FAM126BQ8IXS8 530 aa11.31□□□□□ -0.6
TRAP1-217ENST00000576788 TMEM199Q8N511 208 aa11.31□□□□□ -0.6
TRAP1-217ENST00000576788 CUL5Q93034 780 aa11.31□□□□□ -0.6
TRAP1-217ENST00000576788 MTG1Q9BT17 334 aaPredicted RBP11.31□□□□□ -0.6
TRAP1-217ENST00000576788 PXMP2Q9NR77 195 aa11.31□□□□□ -0.6
TRAP1-217ENST00000576788 COL20A1Q9P218 1284 aa11.31□□□□□ -0.6
TRAP1-217ENST00000576788 SLC12A7Q9Y666 1083 aa11.31□□□□□ -0.6
TRAP1-217ENST00000576788 MRVI1Q9Y6F6 885 aa11.31□□□□□ -0.6
TRAP1-217ENST00000576788 LAMA2P24043 3122 aaKnown RBP11.31□□□□□ -0.6
TRAP1-217ENST00000576788 LAMA3Q16787 3333 aa11.31□□□□□ -0.6
TRAP1-217ENST00000576788 RBM47A0AV96 593 aaKnown RBP11.3□□□□□ -0.6
TRAP1-217ENST00000576788 SORBS3O60504 671 aa11.3□□□□□ -0.6
TRAP1-217ENST00000576788 KPNA6O60684 536 aa11.3□□□□□ -0.6
TRAP1-217ENST00000576788 GH1P01241 217 aa11.3□□□□□ -0.6
TRAP1-217ENST00000576788 NR3C2P08235 984 aa11.3□□□□□ -0.6
TRAP1-217ENST00000576788 HSD17B4P51659 736 aa11.3□□□□□ -0.6
TRAP1-217ENST00000576788 NKX3-2P78367 333 aa11.3□□□□□ -0.6
TRAP1-217ENST00000576788 MICU3Q86XE3 530 aa11.3□□□□□ -0.6
TRAP1-217ENST00000576788 CCDC82Q8N4S0 544 aa11.3□□□□□ -0.6
TRAP1-217ENST00000576788 SMARCC2Q8TAQ2 1214 aa11.3□□□□□ -0.6
TRAP1-217ENST00000576788 TCEANC2Q96MN5 208 aa11.3□□□□□ -0.6
TRAP1-217ENST00000576788 FAM161BQ96MY7 647 aa11.3□□□□□ -0.6
TRAP1-217ENST00000576788 LZTS2Q9BRK4 669 aa11.3□□□□□ -0.6
TRAP1-217ENST00000576788 SPZ1Q9BXG8 430 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms