RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 DISC1Q9NRI5 854 aa14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 TULP4Q9NRJ4 1543 aa14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 SOS2Q07890 1332 aaPredicted RBP14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 SALL3Q9BXA9 1300 aa14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 KLRF2D3W0D1 207 aa14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 THAP12O43422 761 aa14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 CTDNEP1O95476 244 aa14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 VPS41P49754 854 aa14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 TAF11Q15544 211 aa14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 CCHCR1Q8TD31 782 aa14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 OXER1Q8TDS5 423 aa14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 AP1M1Q9BXS5 423 aa14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 GLT8D2Q9H1C3 349 aa14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 VCX3BQ9H321 246 aa14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 ADD3Q9UEY8 706 aaKnown RBP14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 PCDHA12Q9UN75 941 aa14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 SETBP1Q9Y6X0 1596 aa14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 UBN2Q6ZU65 1347 aa14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 LRRC41Q15345 812 aa14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 MYCT1Q8N699 235 aa14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 FAM133AQ8N9E0 248 aa14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 NEK9Q8TD19 979 aa14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 ZNF526Q8TF50 670 aaPredicted RBP14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 PNKPQ96T60 521 aa14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 IMPG2Q9BZV3 1241 aa14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 ADAMTS1Q9UHI8 967 aa14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 L1RE1Q9UN81 338 aa14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 PPP1R37O75864 691 aa14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 GUCY1A3Q02108 690 aa14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 LRRN4CLQ8ND94 238 aa14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 ATP6V1G3Q96LB4 118 aa14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 ELAC2Q9BQ52 826 aaKnown RBP14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 VPS37BQ9H9H4 285 aa14.35□□□□□ -0.11
PCDHGB3-201ENST00000576222 PARP9Q8IXQ6 854 aa14.34□□□□□ -0.11
PCDHGB3-201ENST00000576222 TSNARE1Q96NA8 513 aa14.34□□□□□ -0.11
PCDHGB3-201ENST00000576222 STRBPQ96SI9 672 aaKnown RBP14.34□□□□□ -0.11
PCDHGB3-201ENST00000576222 LRRC1Q9BTT6 524 aa14.34□□□□□ -0.11
PCDHGB3-201ENST00000576222 METTL14Q9HCE5 456 aaKnown RBP14.34□□□□□ -0.11
PCDHGB3-201ENST00000576222 FDPSP14324 419 aaKnown RBP14.34□□□□□ -0.11
PCDHGB3-201ENST00000576222 RASIP1Q5U651 963 aa14.34□□□□□ -0.11
PCDHGB3-201ENST00000576222 CCDC110Q8TBZ0 833 aa14.34□□□□□ -0.11
PCDHGB3-201ENST00000576222 MIPOL1Q8TD10 442 aa14.34□□□□□ -0.11
PCDHGB3-201ENST00000576222 TRIM4Q9C037 500 aa14.34□□□□□ -0.11
PCDHGB3-201ENST00000576222 PASKQ96RG2 1323 aa14.34□□□□□ -0.11
PCDHGB3-201ENST00000576222 ROBO2Q9HCK4 1378 aa14.34□□□□□ -0.11
PCDHGB3-201ENST00000576222 H3BQF6 201 aa14.34□□□□□ -0.11
PCDHGB3-201ENST00000576222 ADCY8P40145 1251 aa14.34□□□□□ -0.11
PCDHGB3-201ENST00000576222 SLCO1A2P46721 670 aa14.34□□□□□ -0.11
PCDHGB3-201ENST00000576222 SLMAPQ14BN4 828 aa14.34□□□□□ -0.11
PCDHGB3-201ENST00000576222 LRRC31Q6UY01 552 aa14.34□□□□□ -0.11
PCDHGB3-201ENST00000576222 HVCN1Q96D96 273 aa14.34□□□□□ -0.11
PCDHGB3-201ENST00000576222 TPX2Q9ULW0 747 aaKnown RBP14.34□□□□□ -0.11
PCDHGB3-201ENST00000576222 COL4A3BPQ9Y5P4 624 aa14.34□□□□□ -0.11
PCDHGB3-201ENST00000576222 RNF17Q9BXT8 1623 aaKnown RBP14.34□□□□□ -0.11
PCDHGB3-201ENST00000576222 H7C1W4 665 aa14.34□□□□□ -0.11
PCDHGB3-201ENST00000576222 PALMO75781 387 aa14.34□□□□□ -0.11
PCDHGB3-201ENST00000576222 CHGBP05060 677 aa14.34□□□□□ -0.11
PCDHGB3-201ENST00000576222 PLCG1P19174 1290 aa14.34□□□□□ -0.11
PCDHGB3-201ENST00000576222 PIH1D3Q9NQM4 214 aaKnown RBP14.34□□□□□ -0.11
PCDHGB3-201ENST00000576222 PLEKHG1Q9ULL1 1385 aa14.33□□□□□ -0.11
PCDHGB3-201ENST00000576222 GOLGA8HP0CJ92 632 aa14.33□□□□□ -0.11
PCDHGB3-201ENST00000576222 LCORLQ8N3X6 602 aa14.33□□□□□ -0.11
PCDHGB3-201ENST00000576222 TFCP2L1Q9NZI6 479 aa14.33□□□□□ -0.11
PCDHGB3-201ENST00000576222 CCDC188H7C350 402 aa14.33□□□□□ -0.12
PCDHGB3-201ENST00000576222 CHMP2AO43633 222 aa14.33□□□□□ -0.12
PCDHGB3-201ENST00000576222 SH2D3CQ8N5H7 860 aa14.33□□□□□ -0.12
PCDHGB3-201ENST00000576222 RDH13Q8NBN7 331 aa14.33□□□□□ -0.12
PCDHGB3-201ENST00000576222 FBXO2Q9UK22 296 aaPredicted RBP14.33□□□□□ -0.12
PCDHGB3-201ENST00000576222 ZNF609O15014 1411 aa14.33□□□□□ -0.12
PCDHGB3-201ENST00000576222 A0A1W2PQC6 194 aa14.33□□□□□ -0.12
PCDHGB3-201ENST00000576222 ERVV-2B6SEH9 535 aa14.33□□□□□ -0.12
PCDHGB3-201ENST00000576222 TXNDC9O14530 226 aa14.33□□□□□ -0.12
PCDHGB3-201ENST00000576222 ZNF185O15231 689 aa14.33□□□□□ -0.12
PCDHGB3-201ENST00000576222 SAAL1Q96ER3 474 aa14.33□□□□□ -0.12
PCDHGB3-201ENST00000576222 NCK2O43639 380 aa14.33□□□□□ -0.12
PCDHGB3-201ENST00000576222 GYG1P46976 350 aa14.33□□□□□ -0.12
PCDHGB3-201ENST00000576222 IL9RQ01113 521 aa14.33□□□□□ -0.12
PCDHGB3-201ENST00000576222 LIN9Q5TKA1 542 aa14.33□□□□□ -0.12
PCDHGB3-201ENST00000576222 ACSBG1Q96GR2 724 aa14.33□□□□□ -0.12
PCDHGB3-201ENST00000576222 FERMT1Q9BQL6 677 aa14.33□□□□□ -0.12
PCDHGB3-201ENST00000576222 LY9Q9HBG7 655 aa14.33□□□□□ -0.12
PCDHGB3-201ENST00000576222 LIMA1Q9UHB6 759 aaKnown RBP14.33□□□□□ -0.12
PCDHGB3-201ENST00000576222 SNX12Q9UMY4 172 aa14.33□□□□□ -0.12
PCDHGB3-201ENST00000576222 RASGRF2O14827 1237 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 MMEP08473 750 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 HNRNPH1P31943 449 aaKnown RBP14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 MAGOHP61326 146 aaKnown RBP14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 P3H4Q92791 437 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 ZMYND12Q9H0C1 365 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 TYW1Q9NV66 732 aaKnown RBP14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 CAPN11Q9UMQ6 739 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 MROH7-TTC4A0A0A0MT08 1334 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 PPP2R2AP63151 447 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 C10orf76Q5T2E6 689 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 TPTE2Q6XPS3 522 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 MAPKAPK5Q8IW41 473 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 MSANTD4Q8NCY6 345 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 EPN3Q9H201 632 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 ZNF446Q9NWS9 450 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 STK24Q9Y6E0 443 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms