RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 MEA1Q16626 185 aa16.07■□□□□ 0.16
SCARF1-209ENST00000576012 CYFIP2Q96F07 1278 aa16.07■□□□□ 0.16
SCARF1-209ENST00000576012 A0A1W2PQC6 194 aa16.07■□□□□ 0.16
SCARF1-209ENST00000576012 USP17L12C9JPN9 530 aa16.07■□□□□ 0.16
SCARF1-209ENST00000576012 USP17L21D6R901 530 aa16.07■□□□□ 0.16
SCARF1-209ENST00000576012 TCP1P17987 556 aaKnown RBP16.07■□□□□ 0.16
SCARF1-209ENST00000576012 PLCG1P19174 1290 aa16.07■□□□□ 0.16
SCARF1-209ENST00000576012 CFAP221Q4G0U5 840 aa16.07■□□□□ 0.16
SCARF1-209ENST00000576012 CCDC170Q8IYT3 715 aa16.07■□□□□ 0.16
SCARF1-209ENST00000576012 P2RX5Q93086 422 aa16.07■□□□□ 0.16
SCARF1-209ENST00000576012 PRPF3O43395 683 aaKnown RBP16.06■□□□□ 0.16
SCARF1-209ENST00000576012 UQCRFS1P1P0C7P4 283 aa16.06■□□□□ 0.16
SCARF1-209ENST00000576012 PUM3Q15397 648 aaKnown RBP16.06■□□□□ 0.16
SCARF1-209ENST00000576012 SEC23AQ15436 765 aa16.06■□□□□ 0.16
SCARF1-209ENST00000576012 HEATR3Q7Z4Q2 680 aa16.06■□□□□ 0.16
SCARF1-209ENST00000576012 ADAT2Q7Z6V5 191 aaKnown RBP16.06■□□□□ 0.16
SCARF1-209ENST00000576012 UHMK1Q8TAS1 419 aaKnown RBP16.06■□□□□ 0.16
SCARF1-209ENST00000576012 LPIN2Q92539 896 aa16.06■□□□□ 0.16
SCARF1-209ENST00000576012 VEZTQ9HBM0 779 aa16.06■□□□□ 0.16
SCARF1-209ENST00000576012 TBC1D7Q9P0N9 293 aa16.06■□□□□ 0.16
SCARF1-209ENST00000576012 LMO7Q8WWI1 1683 aa16.06■□□□□ 0.16
SCARF1-209ENST00000576012 SLC5A1P13866 664 aa16.06■□□□□ 0.16
SCARF1-209ENST00000576012 ATP6V1G3Q96LB4 118 aa16.06■□□□□ 0.16
SCARF1-209ENST00000576012 PACSIN1Q9BY11 444 aa16.06■□□□□ 0.16
SCARF1-209ENST00000576012 TTYH3Q9C0H2 523 aa16.06■□□□□ 0.16
SCARF1-209ENST00000576012 DDX20Q9UHI6 824 aaKnown RBP16.06■□□□□ 0.16
SCARF1-209ENST00000576012 KIF1AQ12756 1690 aa16.06■□□□□ 0.16
SCARF1-209ENST00000576012 RIC1Q4ADV7 1423 aa16.06■□□□□ 0.16
SCARF1-209ENST00000576012 MYH13Q9UKX3 1938 aa16.06■□□□□ 0.16
SCARF1-209ENST00000576012 RAD51CO43502 376 aa16.06■□□□□ 0.16
SCARF1-209ENST00000576012 FSBPO95073 299 aa16.06■□□□□ 0.16
SCARF1-209ENST00000576012 CYP2D6P10635 497 aa16.06■□□□□ 0.16
SCARF1-209ENST00000576012 SCG2P13521 617 aa16.06■□□□□ 0.16
SCARF1-209ENST00000576012 GBP2P32456 591 aaPredicted RBP16.06■□□□□ 0.16
SCARF1-209ENST00000576012 GYG1P46976 350 aa16.06■□□□□ 0.16
SCARF1-209ENST00000576012 SKOR1P84550 965 aa16.06■□□□□ 0.16
SCARF1-209ENST00000576012 FUT2Q10981 343 aa16.06■□□□□ 0.16
SCARF1-209ENST00000576012 PAK2Q13177 524 aa16.06■□□□□ 0.16
SCARF1-209ENST00000576012 LETM2Q2VYF4 491 aa16.06■□□□□ 0.16
SCARF1-209ENST00000576012 CPLX4Q7Z7G2 160 aa16.06■□□□□ 0.16
SCARF1-209ENST00000576012 PNMA8AQ86V59 439 aaPredicted RBP16.06■□□□□ 0.16
SCARF1-209ENST00000576012 SLAIN2Q9P270 581 aa16.06■□□□□ 0.16
SCARF1-209ENST00000576012 NOVA2Q9UNW9 492 aaKnown RBP16.06■□□□□ 0.16
SCARF1-209ENST00000576012 TLDC2A0PJX2 215 aa16.05■□□□□ 0.16
SCARF1-209ENST00000576012 BMP15O95972 392 aa16.05■□□□□ 0.16
SCARF1-209ENST00000576012 CSF1RP07333 972 aa16.05■□□□□ 0.16
SCARF1-209ENST00000576012 CTNNA1P35221 906 aaKnown RBP16.05■□□□□ 0.16
SCARF1-209ENST00000576012 TECP42680 631 aa16.05■□□□□ 0.16
SCARF1-209ENST00000576012 TROAPQ12815 778 aa16.05■□□□□ 0.16
SCARF1-209ENST00000576012 MIIPQ5JXC2 388 aa16.05■□□□□ 0.16
SCARF1-209ENST00000576012 KLHDC7AQ5VTJ3 777 aa16.05■□□□□ 0.16
SCARF1-209ENST00000576012 BRINP3Q76B58 766 aa16.05■□□□□ 0.16
SCARF1-209ENST00000576012 IQCKQ8N0W5 287 aa16.05■□□□□ 0.16
SCARF1-209ENST00000576012 GLIS3Q8NEA6 775 aa16.05■□□□□ 0.16
SCARF1-209ENST00000576012 PIK3R5Q8WYR1 880 aa16.05■□□□□ 0.16
SCARF1-209ENST00000576012 NOX5Q96PH1 765 aa16.05■□□□□ 0.16
SCARF1-209ENST00000576012 THAP9Q9H5L6 903 aa16.05■□□□□ 0.16
SCARF1-209ENST00000576012 VCPKMTQ9H867 229 aa16.05■□□□□ 0.16
SCARF1-209ENST00000576012 LRRC4CQ9HCJ2 640 aa16.05■□□□□ 0.16
SCARF1-209ENST00000576012 VAT1LQ9HCJ6 419 aa16.05■□□□□ 0.16
SCARF1-209ENST00000576012 MAGEB6P1A0A0J9YX57 407 aa16.05■□□□□ 0.16
SCARF1-209ENST00000576012 KCNK3O14649 394 aa16.05■□□□□ 0.16
SCARF1-209ENST00000576012 GOLGA8HP0CJ92 632 aa16.05■□□□□ 0.16
SCARF1-209ENST00000576012 SNCBQ16143 134 aa16.05■□□□□ 0.16
SCARF1-209ENST00000576012 NLRP10Q86W26 655 aa16.05■□□□□ 0.16
SCARF1-209ENST00000576012 ZCRB1Q8TBF4 217 aaKnown RBP16.05■□□□□ 0.16
SCARF1-209ENST00000576012 TCP11Q8WWU5 503 aa16.05■□□□□ 0.16
SCARF1-209ENST00000576012 TSGA10Q9BZW7 698 aa16.05■□□□□ 0.16
SCARF1-209ENST00000576012 ABCC12Q96J65 1359 aa16.05■□□□□ 0.16
SCARF1-209ENST00000576012 KLRC4O43908 158 aa16.04■□□□□ 0.16
SCARF1-209ENST00000576012 ALX1Q15699 326 aa16.04■□□□□ 0.16
SCARF1-209ENST00000576012 CYB5D1Q6P9G0 228 aa16.04■□□□□ 0.16
SCARF1-209ENST00000576012 STAG2Q8N3U4 1231 aa16.04■□□□□ 0.16
SCARF1-209ENST00000576012 OSBPL7Q9BZF2 842 aa16.04■□□□□ 0.16
SCARF1-209ENST00000576012 DPH5Q9H2P9 285 aa16.04■□□□□ 0.16
SCARF1-209ENST00000576012 TMCO5BA8MYB1 307 aa16.04■□□□□ 0.16
SCARF1-209ENST00000576012 PEX19P40855 299 aa16.04■□□□□ 0.16
SCARF1-209ENST00000576012 KDM7AQ6ZMT4 941 aa16.04■□□□□ 0.16
SCARF1-209ENST00000576012 TMTC3Q6ZXV5 915 aa16.04■□□□□ 0.16
SCARF1-209ENST00000576012 PARP9Q8IXQ6 854 aa16.04■□□□□ 0.16
SCARF1-209ENST00000576012 VGLL2Q8N8G2 317 aa16.04■□□□□ 0.16
SCARF1-209ENST00000576012 THOC1Q96FV9 657 aaKnown RBP16.04■□□□□ 0.16
SCARF1-209ENST00000576012 NDST4Q9H3R1 872 aa16.04■□□□□ 0.16
SCARF1-209ENST00000576012 RGPD5Q99666 1765 aa16.04■□□□□ 0.16
SCARF1-209ENST00000576012 GCOM1H8Y6P7 765 aaPredicted RBP16.04■□□□□ 0.16
SCARF1-209ENST00000576012 CEP104O60308 925 aa16.04■□□□□ 0.16
SCARF1-209ENST00000576012 CLTAP09496 248 aa16.04■□□□□ 0.16
SCARF1-209ENST00000576012 MYZAPP0CAP1 466 aa16.04■□□□□ 0.16
SCARF1-209ENST00000576012 FLT3P36888 993 aa16.04■□□□□ 0.16
SCARF1-209ENST00000576012 PPP1R7Q15435 360 aa16.04■□□□□ 0.16
SCARF1-209ENST00000576012 TXNRD1Q16881 649 aa16.04■□□□□ 0.16
SCARF1-209ENST00000576012 TNFRSF25Q93038 417 aa16.04■□□□□ 0.16
SCARF1-209ENST00000576012 NUP58Q9BVL2 599 aa16.04■□□□□ 0.16
SCARF1-209ENST00000576012 ADAMTS1Q9UHI8 967 aa16.04■□□□□ 0.16
SCARF1-209ENST00000576012 TPX2Q9ULW0 747 aaKnown RBP16.04■□□□□ 0.16
SCARF1-209ENST00000576012 KLRC1P26715 233 aa16.03■□□□□ 0.16
SCARF1-209ENST00000576012 ACCSLQ4AC99 568 aa16.03■□□□□ 0.16
SCARF1-209ENST00000576012 HIBCHQ6NVY1 386 aaPredicted RBP16.03■□□□□ 0.16
SCARF1-209ENST00000576012 BLIDQ8IZY5 108 aa16.03■□□□□ 0.16
SCARF1-209ENST00000576012 RTL9Q8NET4 1388 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms