RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 TAAR1Q96RJ0 339 aa15.33■□□□□ 0.04
RPAIN-216ENST00000575599 VTA1Q9NP79 307 aa15.33■□□□□ 0.04
RPAIN-216ENST00000575599 RBM28Q9NW13 759 aaKnown RBP15.33■□□□□ 0.04
RPAIN-216ENST00000575599 LOC102724159A0A0B4J2E5 919 aa15.32■□□□□ 0.04
RPAIN-216ENST00000575599 hCG_1642624A0A1W2PR95 340 aa15.32■□□□□ 0.04
RPAIN-216ENST00000575599 MYADML2A6NDP7 307 aa15.32■□□□□ 0.04
RPAIN-216ENST00000575599 B4DLN1 442 aa15.32■□□□□ 0.04
RPAIN-216ENST00000575599 ADAMTS4O75173 837 aa15.32■□□□□ 0.04
RPAIN-216ENST00000575599 C6orf222P0C671 652 aaPredicted RBP15.32■□□□□ 0.04
RPAIN-216ENST00000575599 HOXA13P31271 388 aaPredicted RBP15.32■□□□□ 0.04
RPAIN-216ENST00000575599 HSD17B4P51659 736 aa15.32■□□□□ 0.04
RPAIN-216ENST00000575599 MRPL12P52815 198 aaKnown RBP15.32■□□□□ 0.04
RPAIN-216ENST00000575599 ATN1P54259 1190 aaPredicted RBP15.32■□□□□ 0.04
RPAIN-216ENST00000575599 PWP2Q15269 919 aaKnown RBP15.32■□□□□ 0.04
RPAIN-216ENST00000575599 C7orf61Q8IZ16 206 aa15.32■□□□□ 0.04
RPAIN-216ENST00000575599 NSUN6Q8TEA1 469 aaKnown RBP15.32■□□□□ 0.04
RPAIN-216ENST00000575599 FERMT2Q96AC1 680 aa15.32■□□□□ 0.04
RPAIN-216ENST00000575599 RMDN3Q96TC7 470 aa15.32■□□□□ 0.04
RPAIN-216ENST00000575599 MAF1Q9H063 256 aa15.32■□□□□ 0.04
RPAIN-216ENST00000575599 CNTNAP5Q8WYK1 1306 aa15.31■□□□□ 0.04
RPAIN-216ENST00000575599 H0YGN5 161 aa15.31■□□□□ 0.04
RPAIN-216ENST00000575599 GCOM1H8Y6P7 765 aaPredicted RBP15.31■□□□□ 0.04
RPAIN-216ENST00000575599 POLR2MP0CAP2 368 aa15.31■□□□□ 0.04
RPAIN-216ENST00000575599 EIF2AK2P19525 551 aaKnown RBP15.31■□□□□ 0.04
RPAIN-216ENST00000575599 PTGS1P23219 599 aa15.31■□□□□ 0.04
RPAIN-216ENST00000575599 EDNRBP24530 442 aa15.31■□□□□ 0.04
RPAIN-216ENST00000575599 METAP2P50579 478 aaKnown RBP eCLIP15.31■□□□□ 0.04
RPAIN-216ENST00000575599 IRX5P78411 483 aaPredicted RBP15.31■□□□□ 0.04
RPAIN-216ENST00000575599 LRRC26Q2I0M4 334 aa15.31■□□□□ 0.04
RPAIN-216ENST00000575599 ARHGEF16Q5VV41 709 aa15.31■□□□□ 0.04
RPAIN-216ENST00000575599 TAPT1Q6NXT6 567 aa15.31■□□□□ 0.04
RPAIN-216ENST00000575599 RUFY3Q7L099 469 aa15.31■□□□□ 0.04
RPAIN-216ENST00000575599 TLK2Q86UE8 772 aa15.31■□□□□ 0.04
RPAIN-216ENST00000575599 UPF3BQ9BZI7 483 aaKnown RBP15.31■□□□□ 0.04
RPAIN-216ENST00000575599 SPC25Q9HBM1 224 aa15.31■□□□□ 0.04
RPAIN-216ENST00000575599 METRNQ9UJH8 293 aa15.31■□□□□ 0.04
RPAIN-216ENST00000575599 NR2E3Q9Y5X4 410 aa15.31■□□□□ 0.04
RPAIN-216ENST00000575599 CYP46A1Q9Y6A2 500 aa15.31■□□□□ 0.04
RPAIN-216ENST00000575599 SMPD1P17405 629 aa15.3■□□□□ 0.04
RPAIN-216ENST00000575599 TMEM63BQ5T3F8 832 aa15.3■□□□□ 0.04
RPAIN-216ENST00000575599 FCHSD1Q86WN1 690 aa15.3■□□□□ 0.04
RPAIN-216ENST00000575599 ZSWIM6Q9HCJ5 1215 aa15.3■□□□□ 0.04
RPAIN-216ENST00000575599 PXMP2Q9NR77 195 aa15.3■□□□□ 0.04
RPAIN-216ENST00000575599 C7P10643 843 aa15.29■□□□□ 0.04
RPAIN-216ENST00000575599 CDC27P30260 824 aa15.29■□□□□ 0.04
RPAIN-216ENST00000575599 RCAN1P53805 252 aa15.29■□□□□ 0.04
RPAIN-216ENST00000575599 GJA9P57773 515 aa15.29■□□□□ 0.04
RPAIN-216ENST00000575599 GHRHRQ02643 423 aa15.29■□□□□ 0.04
RPAIN-216ENST00000575599 IQSEC1Q6DN90 963 aa15.29■□□□□ 0.04
RPAIN-216ENST00000575599 HEATR3Q7Z4Q2 680 aa15.29■□□□□ 0.04
RPAIN-216ENST00000575599 GPKOWQ92917 476 aaPredicted RBP eCLIP15.29■□□□□ 0.04
RPAIN-216ENST00000575599 PHF12Q96QT6 1004 aa15.29■□□□□ 0.04
RPAIN-216ENST00000575599 WDR11Q9BZH6 1224 aa15.29■□□□□ 0.04
RPAIN-216ENST00000575599 UPF3AQ9H1J1 476 aaKnown RBP15.29■□□□□ 0.04
RPAIN-216ENST00000575599 MAP3K20Q9NYL2 800 aaKnown RBP15.29■□□□□ 0.04
RPAIN-216ENST00000575599 PHF24Q9UPV7 400 aa15.29■□□□□ 0.04
RPAIN-216ENST00000575599 GNEQ9Y223 722 aaKnown RBP15.29■□□□□ 0.04
RPAIN-216ENST00000575599 A0A1W2PQ45 241 aaPredicted RBP15.28■□□□□ 0.04
RPAIN-216ENST00000575599 A0A1W2PQY0 241 aa15.28■□□□□ 0.04
RPAIN-216ENST00000575599 DYNC1LI2O43237 492 aaPredicted RBP15.28■□□□□ 0.04
RPAIN-216ENST00000575599 BEX3Q00994 111 aa15.28■□□□□ 0.04
RPAIN-216ENST00000575599 PPP2R5BQ15173 497 aa15.28■□□□□ 0.04
RPAIN-216ENST00000575599 KCNA10Q16322 511 aa15.28■□□□□ 0.04
RPAIN-216ENST00000575599 GNASQ5JWF2 1037 aa15.28■□□□□ 0.04
RPAIN-216ENST00000575599 SEPT14Q6ZU15 432 aa15.28■□□□□ 0.04
RPAIN-216ENST00000575599 FBXL16Q8N461 479 aa15.28■□□□□ 0.04
RPAIN-216ENST00000575599 SAMD3Q8N6K7 520 aa15.28■□□□□ 0.04
RPAIN-216ENST00000575599 KLHDC9Q8NEP7 349 aa15.28■□□□□ 0.04
RPAIN-216ENST00000575599 SLC39A7Q92504 469 aa15.28■□□□□ 0.04
RPAIN-216ENST00000575599 CUL5Q93034 780 aa15.28■□□□□ 0.04
RPAIN-216ENST00000575599 IWS1Q96ST2 819 aa15.28■□□□□ 0.04
RPAIN-216ENST00000575599 AGXT2Q9BYV1 514 aa15.28■□□□□ 0.04
RPAIN-216ENST00000575599 TM6SF1Q9BZW5 370 aa15.28■□□□□ 0.04
RPAIN-216ENST00000575599 AP5M1Q9H0R1 490 aa15.28■□□□□ 0.04
RPAIN-216ENST00000575599 FAM217BQ9NTX9 383 aaPredicted RBP15.28■□□□□ 0.04
RPAIN-216ENST00000575599 ZMYND8Q9ULU4 1186 aaPredicted RBP15.28■□□□□ 0.04
RPAIN-216ENST00000575599 CCDC196A0A1B0GTZ2 297 aa15.27■□□□□ 0.04
RPAIN-216ENST00000575599 MOXD2PA6NHM9 499 aa15.27■□□□□ 0.04
RPAIN-216ENST00000575599 NR3C2P08235 984 aa15.27■□□□□ 0.04
RPAIN-216ENST00000575599 MYCLP12524 364 aaPredicted RBP15.27■□□□□ 0.04
RPAIN-216ENST00000575599 CST5P28325 142 aaPredicted RBP15.27■□□□□ 0.04
RPAIN-216ENST00000575599 ADD1P35611 737 aaKnown RBP15.27■□□□□ 0.04
RPAIN-216ENST00000575599 ACLYP53396 1101 aa15.27■□□□□ 0.04
RPAIN-216ENST00000575599 RTP1P59025 263 aa15.27■□□□□ 0.04
RPAIN-216ENST00000575599 FUT2Q10981 343 aa15.27■□□□□ 0.04
RPAIN-216ENST00000575599 TOB2Q14106 344 aaPredicted RBP15.27■□□□□ 0.04
RPAIN-216ENST00000575599 STXBP2Q15833 593 aa15.27■□□□□ 0.04
RPAIN-216ENST00000575599 DUSP28Q4G0W2 176 aa15.27■□□□□ 0.04
RPAIN-216ENST00000575599 SLC39A5Q6ZMH5 540 aa15.27■□□□□ 0.04
RPAIN-216ENST00000575599 PCSK9Q8NBP7 692 aaKnown RBP15.27■□□□□ 0.04
RPAIN-216ENST00000575599 SMARCC2Q8TAQ2 1214 aa15.27■□□□□ 0.04
RPAIN-216ENST00000575599 SCFD2Q8WU76 684 aa15.27■□□□□ 0.04
RPAIN-216ENST00000575599 LARP6Q9BRS8 491 aaKnown RBP15.27■□□□□ 0.04
RPAIN-216ENST00000575599 TSEN34Q9BSV6 310 aaKnown RBP15.27■□□□□ 0.04
RPAIN-216ENST00000575599 PDRG1Q9NUG6 133 aa15.27■□□□□ 0.04
RPAIN-216ENST00000575599 ATP11BQ9Y2G3 1177 aa15.27■□□□□ 0.04
RPAIN-216ENST00000575599 RBM47A0AV96 593 aaKnown RBP15.26■□□□□ 0.03
RPAIN-216ENST00000575599 CTAGE5O15320 804 aa15.26■□□□□ 0.03
RPAIN-216ENST00000575599 SEC24BO95487 1268 aa15.26■□□□□ 0.03
RPAIN-216ENST00000575599 ASGR1P07306 291 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms