RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 ZMYM1Q5SVZ6 1142 aa11.79□□□□□ -0.52
CALCOCO2-227ENST00000575560 SPRED2Q7Z698 418 aa11.79□□□□□ -0.52
CALCOCO2-227ENST00000575560 PPP1R13LQ8WUF5 828 aa11.79□□□□□ -0.52
CALCOCO2-227ENST00000575560 FTOQ9C0B1 505 aaKnown RBP eCLIP11.79□□□□□ -0.52
CALCOCO2-227ENST00000575560 C11orf16Q9NQ32 467 aa11.79□□□□□ -0.52
CALCOCO2-227ENST00000575560 LMCD1Q9NZU5 365 aa11.79□□□□□ -0.52
CALCOCO2-227ENST00000575560 LCTP09848 1927 aa11.79□□□□□ -0.52
CALCOCO2-227ENST00000575560 SCN10AQ9Y5Y9 1956 aa11.79□□□□□ -0.52
CALCOCO2-227ENST00000575560 PTPDC1A2A3K4 754 aa11.78□□□□□ -0.52
CALCOCO2-227ENST00000575560 FGRP09769 529 aa11.78□□□□□ -0.52
CALCOCO2-227ENST00000575560 CTDSPL2Q05D32 466 aa11.78□□□□□ -0.52
CALCOCO2-227ENST00000575560 SYDE2Q5VT97 1194 aa11.78□□□□□ -0.52
CALCOCO2-227ENST00000575560 PI4K2BQ8TCG2 481 aa11.78□□□□□ -0.52
CALCOCO2-227ENST00000575560 SCFD2Q8WU76 684 aa11.78□□□□□ -0.52
CALCOCO2-227ENST00000575560 CTAGE1Q96RT6 745 aa11.78□□□□□ -0.52
CALCOCO2-227ENST00000575560 CD320Q9NPF0 282 aa11.78□□□□□ -0.52
CALCOCO2-227ENST00000575560 ANAPC4Q9UJX5 808 aa11.78□□□□□ -0.52
CALCOCO2-227ENST00000575560 HCN4Q9Y3Q4 1203 aa11.78□□□□□ -0.52
CALCOCO2-227ENST00000575560 TET1Q8NFU7 2136 aa11.77□□□□□ -0.52
CALCOCO2-227ENST00000575560 LCHNA4D1U4 455 aa11.77□□□□□ -0.53
CALCOCO2-227ENST00000575560 PI4K2BG5E9Z4 385 aa11.77□□□□□ -0.53
CALCOCO2-227ENST00000575560 ORC4O43929 436 aa11.77□□□□□ -0.53
CALCOCO2-227ENST00000575560 RANBP6O60518 1105 aaKnown RBP11.77□□□□□ -0.53
CALCOCO2-227ENST00000575560 CALML3P27482 149 aa11.77□□□□□ -0.53
CALCOCO2-227ENST00000575560 RPS6P62753 249 aaKnown RBP11.77□□□□□ -0.53
CALCOCO2-227ENST00000575560 PDE4DQ08499 809 aa11.77□□□□□ -0.53
CALCOCO2-227ENST00000575560 PPP2R5BQ15173 497 aa11.77□□□□□ -0.53
CALCOCO2-227ENST00000575560 C20orf194Q5TEA3 1177 aa11.77□□□□□ -0.53
CALCOCO2-227ENST00000575560 SLC30A10Q6XR72 485 aa11.77□□□□□ -0.53
CALCOCO2-227ENST00000575560 RNF207Q6ZRF8 634 aa11.77□□□□□ -0.53
CALCOCO2-227ENST00000575560 SESTD1Q86VW0 696 aa11.77□□□□□ -0.53
CALCOCO2-227ENST00000575560 DNERQ8NFT8 737 aa11.77□□□□□ -0.53
CALCOCO2-227ENST00000575560 COPS5Q92905 334 aa11.77□□□□□ -0.53
CALCOCO2-227ENST00000575560 MTMR7Q9Y216 660 aa11.77□□□□□ -0.53
CALCOCO2-227ENST00000575560 TTC41PQ6P2S7 1318 aa11.77□□□□□ -0.53
CALCOCO2-227ENST00000575560 RAD50Q92878 1312 aa11.77□□□□□ -0.53
CALCOCO2-227ENST00000575560 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.76□□□□□ -0.53
CALCOCO2-227ENST00000575560 ABCB7O75027 752 aa11.76□□□□□ -0.53
CALCOCO2-227ENST00000575560 ARIH2O95376 493 aa11.76□□□□□ -0.53
CALCOCO2-227ENST00000575560 TXNP10599 105 aaKnown RBP11.76□□□□□ -0.53
CALCOCO2-227ENST00000575560 WDR5P61964 334 aaKnown RBP11.76□□□□□ -0.53
CALCOCO2-227ENST00000575560 PTGISQ16647 500 aa11.76□□□□□ -0.53
CALCOCO2-227ENST00000575560 CCDC96Q2M329 555 aa11.76□□□□□ -0.53
CALCOCO2-227ENST00000575560 CCDC62Q6P9F0 684 aa11.76□□□□□ -0.53
CALCOCO2-227ENST00000575560 TMCO2Q7Z6W1 182 aaPredicted RBP11.76□□□□□ -0.53
CALCOCO2-227ENST00000575560 RGS22Q8NE09 1264 aa11.76□□□□□ -0.53
CALCOCO2-227ENST00000575560 CAGE1Q8TC20 777 aa11.76□□□□□ -0.53
CALCOCO2-227ENST00000575560 AFAP1L1Q8TED9 768 aa11.76□□□□□ -0.53
CALCOCO2-227ENST00000575560 TMEM47Q9BQJ4 181 aa11.76□□□□□ -0.53
CALCOCO2-227ENST00000575560 TCP11L1Q9NUJ3 509 aa11.76□□□□□ -0.53
CALCOCO2-227ENST00000575560 PNMA2Q9UL42 364 aa11.76□□□□□ -0.53
CALCOCO2-227ENST00000575560 PIEZO1Q92508 2521 aa11.76□□□□□ -0.53
CALCOCO2-227ENST00000575560 WDFY4Q6ZS81 3184 aa11.75□□□□□ -0.53
CALCOCO2-227ENST00000575560 CXCL10P02778 98 aa11.75□□□□□ -0.53
CALCOCO2-227ENST00000575560 TOP1P11387 765 aaKnown RBP11.75□□□□□ -0.53
CALCOCO2-227ENST00000575560 KCNJ6P48051 423 aa11.75□□□□□ -0.53
CALCOCO2-227ENST00000575560 RBL2Q08999 1139 aa11.75□□□□□ -0.53
CALCOCO2-227ENST00000575560 ALX1Q15699 326 aa11.75□□□□□ -0.53
CALCOCO2-227ENST00000575560 VPS53Q5VIR6 699 aa11.75□□□□□ -0.53
CALCOCO2-227ENST00000575560 GDF6Q6KF10 455 aaPredicted RBP11.75□□□□□ -0.53
CALCOCO2-227ENST00000575560 MIER1Q8N108 512 aa11.75□□□□□ -0.53
CALCOCO2-227ENST00000575560 DHX38Q92620 1227 aaKnown RBP11.75□□□□□ -0.53
CALCOCO2-227ENST00000575560 KAT2BQ92831 832 aa11.75□□□□□ -0.53
CALCOCO2-227ENST00000575560 MPHOSPH6Q99547 160 aaKnown RBP11.75□□□□□ -0.53
CALCOCO2-227ENST00000575560 RAD9AQ99638 391 aa11.75□□□□□ -0.53
CALCOCO2-227ENST00000575560 FSD1Q9BTV5 496 aa11.75□□□□□ -0.53
CALCOCO2-227ENST00000575560 SUGCTQ9HAC7 445 aa11.75□□□□□ -0.53
CALCOCO2-227ENST00000575560 GPCPD1Q9NPB8 672 aa11.75□□□□□ -0.53
CALCOCO2-227ENST00000575560 NOD1Q9Y239 953 aa11.75□□□□□ -0.53
CALCOCO2-227ENST00000575560 BRWD1Q9NSI6 2320 aa11.74□□□□□ -0.53
CALCOCO2-227ENST00000575560 NBNO60934 754 aa11.74□□□□□ -0.53
CALCOCO2-227ENST00000575560 GJB5O95377 273 aa11.74□□□□□ -0.53
CALCOCO2-227ENST00000575560 PARNO95453 639 aaKnown RBP11.74□□□□□ -0.53
CALCOCO2-227ENST00000575560 SNHG28P0DPA3 235 aa11.74□□□□□ -0.53
CALCOCO2-227ENST00000575560 PDHBP11177 359 aa11.74□□□□□ -0.53
CALCOCO2-227ENST00000575560 SELPP16109 830 aa11.74□□□□□ -0.53
CALCOCO2-227ENST00000575560 ERVK-21P61565 698 aa11.74□□□□□ -0.53
CALCOCO2-227ENST00000575560 DEFB103AP81534 67 aa11.74□□□□□ -0.53
CALCOCO2-227ENST00000575560 TCTN1Q2MV58 587 aa11.74□□□□□ -0.53
CALCOCO2-227ENST00000575560 CNKSR3Q6P9H4 555 aa11.74□□□□□ -0.53
CALCOCO2-227ENST00000575560 LRRC8DQ7L1W4 858 aa11.74□□□□□ -0.53
CALCOCO2-227ENST00000575560 CCDC155Q8N6L0 562 aa11.74□□□□□ -0.53
CALCOCO2-227ENST00000575560 OTUD7AQ8TE49 926 aaPredicted RBP11.74□□□□□ -0.53
CALCOCO2-227ENST00000575560 GDPD5Q8WTR4 605 aa11.74□□□□□ -0.53
CALCOCO2-227ENST00000575560 AFG1LQ8WV93 481 aa11.74□□□□□ -0.53
CALCOCO2-227ENST00000575560 ZBED2Q9BTP6 218 aa11.74□□□□□ -0.53
CALCOCO2-227ENST00000575560 RCAN3Q9UKA8 241 aa11.74□□□□□ -0.53
CALCOCO2-227ENST00000575560 FRMPD2Q68DX3 1309 aaPredicted RBP11.74□□□□□ -0.53
CALCOCO2-227ENST00000575560 WDR19Q8NEZ3 1342 aa11.74□□□□□ -0.53
CALCOCO2-227ENST00000575560 ABHD14A-ACY1A0A1B0GW23 586 aa11.73□□□□□ -0.53
CALCOCO2-227ENST00000575560 FAM86C2PA6NEL3 165 aa11.73□□□□□ -0.53
CALCOCO2-227ENST00000575560 B4DLN1 442 aa11.73□□□□□ -0.53
CALCOCO2-227ENST00000575560 TRIOO75962 3097 aa11.73□□□□□ -0.53
CALCOCO2-227ENST00000575560 FGAP02671 866 aa11.73□□□□□ -0.53
CALCOCO2-227ENST00000575560 MMP3P08254 477 aa11.73□□□□□ -0.53
CALCOCO2-227ENST00000575560 CKBP12277 381 aa11.73□□□□□ -0.53
CALCOCO2-227ENST00000575560 MRPL12P52815 198 aaKnown RBP11.73□□□□□ -0.53
CALCOCO2-227ENST00000575560 ARHGAP1Q07960 439 aa11.73□□□□□ -0.53
CALCOCO2-227ENST00000575560 ZNF543Q08ER8 600 aa11.73□□□□□ -0.53
CALCOCO2-227ENST00000575560 LEXMQ3ZCV2 418 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms