RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 LIMA1Q9UHB6 759 aaKnown RBP7.62□□□□□ -1.19
SMG6-217ENST00000575338 ZBTB21Q9ULJ3 1066 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 PYCARDQ9ULZ3 195 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 ATF5Q9Y2D1 282 aaPredicted RBP7.62□□□□□ -1.19
SMG6-217ENST00000575338 UQCRHLA0A096LP55 91 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 AKR1B15C9JRZ8 316 aaPredicted RBP7.61□□□□□ -1.19
SMG6-217ENST00000575338 N4BP3O15049 544 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 UQCRHP07919 91 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 CYP3A4P08684 503 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 TNNT1P13805 278 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 KCNA3P22001 575 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 CCNE1P24864 410 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 SLC16A2P36021 539 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 ZNF76P36508 570 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 SREBF1P36956 1147 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 CAP2P40123 477 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 ARHGAP4P98171 946 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 SETQ01105 290 aaPredicted RBP7.61□□□□□ -1.19
SMG6-217ENST00000575338 MAP3K10Q02779 954 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 LRRC63Q05C16 580 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 FMR1Q06787 632 aaKnown RBP eCLIP7.61□□□□□ -1.19
SMG6-217ENST00000575338 LRMPQ12912 555 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 Q4G0T1 1027 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 NAALADL2Q58DX5 795 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 CEP135Q66GS9 1140 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 DCAF15Q66K64 600 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 TTBK2Q6IQ55 1244 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 KRT26Q7Z3Y9 468 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 MCF2L2Q86YR7 1114 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 CLEC10AQ8IUN9 316 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 CCDC65Q8IXS2 484 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 ADSSL1Q8N142 457 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 CCAR2Q8N163 923 aaKnown RBP7.61□□□□□ -1.19
SMG6-217ENST00000575338 RETREG2Q8NC44 543 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 RAD54LQ92698 747 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 DPF2Q92785 391 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 TRIM47Q96LD4 638 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 MBOAT7Q96N66 472 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 FEZ1Q99689 392 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 BAG1Q99933 345 aaPredicted RBP7.61□□□□□ -1.19
SMG6-217ENST00000575338 MAF1Q9H063 256 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 BLZF1Q9H2G9 400 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 MYOZ2Q9NPC6 264 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 TMEM260Q9NX78 707 aa7.61□□□□□ -1.19
SMG6-217ENST00000575338 PITPNM2Q9BZ72 1349 aa7.6□□□□□ -1.19
SMG6-217ENST00000575338 A0A1W2PQC6 194 aa7.6□□□□□ -1.19
SMG6-217ENST00000575338 CLRN2A0PK11 232 aa7.6□□□□□ -1.19
SMG6-217ENST00000575338 KCNJ18B7U540 433 aa7.6□□□□□ -1.19
SMG6-217ENST00000575338 GCOM1H8Y6P7 765 aaPredicted RBP7.6□□□□□ -1.19
SMG6-217ENST00000575338 WDR46O15213 610 aaKnown RBP7.6□□□□□ -1.19
SMG6-217ENST00000575338 TDP2O95551 362 aa7.6□□□□□ -1.19
SMG6-217ENST00000575338 POLR2MP0CAP2 368 aa7.6□□□□□ -1.19
SMG6-217ENST00000575338 CIITAP33076 1130 aa7.6□□□□□ -1.19
SMG6-217ENST00000575338 GTF2F1P35269 517 aaKnown RBP eCLIP7.6□□□□□ -1.19
SMG6-217ENST00000575338 CCT6AP40227 531 aaKnown RBP7.6□□□□□ -1.19
SMG6-217ENST00000575338 PRCPP42785 496 aa7.6□□□□□ -1.19
SMG6-217ENST00000575338 DNM2P50570 870 aa7.6□□□□□ -1.19
SMG6-217ENST00000575338 USP14P54578 494 aa7.6□□□□□ -1.19
SMG6-217ENST00000575338 ZNF280AP59817 542 aaPredicted RBP7.6□□□□□ -1.19
SMG6-217ENST00000575338 CXCL9Q07325 125 aa7.6□□□□□ -1.19
SMG6-217ENST00000575338 TBX2Q13207 712 aaPredicted RBP7.6□□□□□ -1.19
SMG6-217ENST00000575338 KCNJ12Q14500 433 aa7.6□□□□□ -1.19
SMG6-217ENST00000575338 SYCP1Q15431 976 aa7.6□□□□□ -1.19
SMG6-217ENST00000575338 UBE2SQ16763 222 aa7.6□□□□□ -1.19
SMG6-217ENST00000575338 TMEM119Q4V9L6 283 aa7.6□□□□□ -1.19
SMG6-217ENST00000575338 TCP11X2Q5H9J9 407 aa7.6□□□□□ -1.19
SMG6-217ENST00000575338 ARMCX5Q6P1M9 558 aa7.6□□□□□ -1.19
SMG6-217ENST00000575338 RASGRP2Q7LDG7 609 aa7.6□□□□□ -1.19
SMG6-217ENST00000575338 DEFB132Q7Z7B7 95 aa7.6□□□□□ -1.19
SMG6-217ENST00000575338 APOBEC3FQ8IUX4 373 aaKnown RBP7.6□□□□□ -1.19
SMG6-217ENST00000575338 TRMT44Q8IYL2 757 aaKnown RBP7.6□□□□□ -1.19
SMG6-217ENST00000575338 GUF1Q8N442 669 aaKnown RBP7.6□□□□□ -1.19
SMG6-217ENST00000575338 P2RX5Q93086 422 aa7.6□□□□□ -1.19
SMG6-217ENST00000575338 ZBED3Q96IU2 234 aaPredicted RBP7.6□□□□□ -1.19
SMG6-217ENST00000575338 C16orf45Q96MC5 204 aaPredicted RBP7.6□□□□□ -1.19
SMG6-217ENST00000575338 AS3MTQ9HBK9 375 aa7.6□□□□□ -1.19
SMG6-217ENST00000575338 KCNMB3Q9NPA1 279 aa7.6□□□□□ -1.19
SMG6-217ENST00000575338 SAMSN1Q9NSI8 373 aaKnown RBP7.6□□□□□ -1.19
SMG6-217ENST00000575338 ADD3Q9UEY8 706 aaKnown RBP7.6□□□□□ -1.19
SMG6-217ENST00000575338 PRR12Q9ULL5 1215 aa7.6□□□□□ -1.19
SMG6-217ENST00000575338 CTDP1Q9Y5B0 961 aaPredicted RBP7.6□□□□□ -1.19
SMG6-217ENST00000575338 MYH11P35749 1972 aa7.6□□□□□ -1.19
SMG6-217ENST00000575338 CNTNAP1P78357 1384 aa7.59□□□□□ -1.19
SMG6-217ENST00000575338 FAM196BA6NMK8 535 aa7.59□□□□□ -1.19
SMG6-217ENST00000575338 PP2D1A8MPX8 630 aa7.59□□□□□ -1.19
SMG6-217ENST00000575338 WNT10BO00744 389 aa7.59□□□□□ -1.19
SMG6-217ENST00000575338 MEIS2O14770 477 aa7.59□□□□□ -1.19
SMG6-217ENST00000575338 SLC37A4O43826 429 aa7.59□□□□□ -1.19
SMG6-217ENST00000575338 KLRC4O43908 158 aa7.59□□□□□ -1.19
SMG6-217ENST00000575338 CTNND1O60716 968 aaKnown RBP7.59□□□□□ -1.19
SMG6-217ENST00000575338 PPP1R11O60927 126 aaPredicted RBP7.59□□□□□ -1.19
SMG6-217ENST00000575338 GNA14O95837 355 aa7.59□□□□□ -1.19
SMG6-217ENST00000575338 CD44P16070 742 aaKnown RBP7.59□□□□□ -1.19
SMG6-217ENST00000575338 CDC25AP30304 524 aa7.59□□□□□ -1.19
SMG6-217ENST00000575338 COPB1P53618 953 aaKnown RBP7.59□□□□□ -1.19
SMG6-217ENST00000575338 STX17P56962 302 aa7.59□□□□□ -1.19
SMG6-217ENST00000575338 GRB10Q13322 594 aa7.59□□□□□ -1.19
SMG6-217ENST00000575338 USH1GQ495M9 461 aa7.59□□□□□ -1.19
SMG6-217ENST00000575338 FKBP15Q5T1M5 1219 aa7.59□□□□□ -1.19
SMG6-217ENST00000575338 PPP4R3CPQ6ZMV5 832 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms