RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 FAM47CQ5HY64 1035 aa12.24□□□□□ -0.45
TVP23B-208ENST00000575261 PPP2R2DQ66LE6 453 aa12.24□□□□□ -0.45
TVP23B-208ENST00000575261 NFRKBQ6P4R8 1299 aa12.24□□□□□ -0.45
TVP23B-208ENST00000575261 DGKHQ86XP1 1220 aa12.24□□□□□ -0.45
TVP23B-208ENST00000575261 SMC5Q8IY18 1101 aa12.24□□□□□ -0.45
TVP23B-208ENST00000575261 ZKSCAN3Q9BRR0 538 aa12.24□□□□□ -0.45
TVP23B-208ENST00000575261 THEGQ9P2T0 379 aa12.24□□□□□ -0.45
TVP23B-208ENST00000575261 YBX2Q9Y2T7 364 aaKnown RBP12.24□□□□□ -0.45
TVP23B-208ENST00000575261 A6NJR5 290 aa12.23□□□□□ -0.45
TVP23B-208ENST00000575261 GOLGA8HP0CJ92 632 aa12.23□□□□□ -0.45
TVP23B-208ENST00000575261 TXNP10599 105 aaKnown RBP12.23□□□□□ -0.45
TVP23B-208ENST00000575261 ACTN1P12814 892 aa12.23□□□□□ -0.45
TVP23B-208ENST00000575261 TTLL4Q14679 1199 aa12.23□□□□□ -0.45
TVP23B-208ENST00000575261 CDC37Q16543 378 aaPredicted RBP12.23□□□□□ -0.45
TVP23B-208ENST00000575261 CCDC178Q5BJE1 867 aa12.23□□□□□ -0.45
TVP23B-208ENST00000575261 B4GALNT3Q6L9W6 998 aa12.23□□□□□ -0.45
TVP23B-208ENST00000575261 PNMA1Q8ND90 353 aa12.23□□□□□ -0.45
TVP23B-208ENST00000575261 RGS22Q8NE09 1264 aa12.23□□□□□ -0.45
TVP23B-208ENST00000575261 PPM1EQ8WY54 764 aa12.23□□□□□ -0.45
TVP23B-208ENST00000575261 MAF1Q9H063 256 aa12.23□□□□□ -0.45
TVP23B-208ENST00000575261 DIAPH3Q9NSV4 1193 aa12.23□□□□□ -0.45
TVP23B-208ENST00000575261 PCDHA11Q9Y5I1 949 aa12.23□□□□□ -0.45
TVP23B-208ENST00000575261 SCN5AQ14524 2016 aa12.23□□□□□ -0.45
TVP23B-208ENST00000575261 ABCB11O95342 1321 aa12.22□□□□□ -0.45
TVP23B-208ENST00000575261 BDP1A6H8Y1 2624 aa12.22□□□□□ -0.45
TVP23B-208ENST00000575261 MYH6P13533 1939 aa12.22□□□□□ -0.45
TVP23B-208ENST00000575261 PITPNM1O00562 1244 aa12.22□□□□□ -0.45
TVP23B-208ENST00000575261 ATP2A2P16615 1042 aaKnown RBP12.22□□□□□ -0.45
TVP23B-208ENST00000575261 IGFBP4P22692 258 aa12.22□□□□□ -0.45
TVP23B-208ENST00000575261 RFC2P35250 354 aa12.22□□□□□ -0.45
TVP23B-208ENST00000575261 RABGGTBP53611 331 aa12.22□□□□□ -0.45
TVP23B-208ENST00000575261 PTPN11Q06124 597 aaPredicted RBP12.22□□□□□ -0.45
TVP23B-208ENST00000575261 ADGRE1Q14246 886 aa12.22□□□□□ -0.45
TVP23B-208ENST00000575261 NBPF20Q3BBV1 942 aa12.22□□□□□ -0.45
TVP23B-208ENST00000575261 ASPRV1Q53RT3 343 aa12.22□□□□□ -0.45
TVP23B-208ENST00000575261 CWC27Q6UX04 472 aaKnown RBP12.22□□□□□ -0.45
TVP23B-208ENST00000575261 DEFB128Q7Z7B8 93 aa12.22□□□□□ -0.45
TVP23B-208ENST00000575261 ATXN2LQ8WWM7 1075 aaKnown RBP12.22□□□□□ -0.45
TVP23B-208ENST00000575261 COPS5Q92905 334 aa12.22□□□□□ -0.45
TVP23B-208ENST00000575261 VWCEQ96DN2 955 aa12.22□□□□□ -0.45
TVP23B-208ENST00000575261 CPVLQ9H3G5 476 aa12.22□□□□□ -0.45
TVP23B-208ENST00000575261 RWDD1Q9H446 243 aaPredicted RBP12.22□□□□□ -0.45
TVP23B-208ENST00000575261 OSBPL3Q9H4L5 887 aa12.22□□□□□ -0.45
TVP23B-208ENST00000575261 KAT14Q9H8E8 782 aa12.22□□□□□ -0.45
TVP23B-208ENST00000575261 PRDM6Q9NQX0 595 aa12.22□□□□□ -0.45
TVP23B-208ENST00000575261 NOD1Q9Y239 953 aa12.22□□□□□ -0.45
TVP23B-208ENST00000575261 B4E1Z4 1266 aa12.21□□□□□ -0.45
TVP23B-208ENST00000575261 HIP1O00291 1037 aa12.21□□□□□ -0.45
TVP23B-208ENST00000575261 KDM4AO75164 1064 aa12.21□□□□□ -0.45
TVP23B-208ENST00000575261 ARIH2O95376 493 aa12.21□□□□□ -0.45
TVP23B-208ENST00000575261 BFSP2Q13515 415 aa12.21□□□□□ -0.45
TVP23B-208ENST00000575261 IMMTQ16891 758 aaKnown RBP12.21□□□□□ -0.45
TVP23B-208ENST00000575261 CHD1LQ86WJ1 897 aa12.21□□□□□ -0.45
TVP23B-208ENST00000575261 MCF2L2Q86YR7 1114 aa12.21□□□□□ -0.45
TVP23B-208ENST00000575261 ZSCAN10Q96SZ4 725 aaPredicted RBP12.21□□□□□ -0.45
TVP23B-208ENST00000575261 SLC9A7Q96T83 725 aa12.21□□□□□ -0.45
TVP23B-208ENST00000575261 UBA5Q9GZZ9 404 aa12.21□□□□□ -0.45
TVP23B-208ENST00000575261 KIAA1217Q5T5P2 1943 aa12.21□□□□□ -0.46
TVP23B-208ENST00000575261 DHX16O60231 1041 aaKnown RBP12.2□□□□□ -0.46
TVP23B-208ENST00000575261 MMP3P08254 477 aa12.2□□□□□ -0.46
TVP23B-208ENST00000575261 PARP1P09874 1014 aaKnown RBP12.2□□□□□ -0.46
TVP23B-208ENST00000575261 IQCF3P0C7M6 154 aa12.2□□□□□ -0.46
TVP23B-208ENST00000575261 MYOGP15173 224 aa12.2□□□□□ -0.46
TVP23B-208ENST00000575261 CACNB1Q02641 598 aaPredicted RBP12.2□□□□□ -0.46
TVP23B-208ENST00000575261 NUCB1Q02818 461 aa12.2□□□□□ -0.46
TVP23B-208ENST00000575261 CCDC85BQ15834 202 aaPredicted RBP12.2□□□□□ -0.46
TVP23B-208ENST00000575261 TMEM67Q5HYA8 995 aa12.2□□□□□ -0.46
TVP23B-208ENST00000575261 CCDC62Q6P9F0 684 aa12.2□□□□□ -0.46
TVP23B-208ENST00000575261 PLEKHM2Q8IWE5 1019 aa12.2□□□□□ -0.46
TVP23B-208ENST00000575261 ADGRF4Q8IZF3 695 aa12.2□□□□□ -0.46
TVP23B-208ENST00000575261 CCDC155Q8N6L0 562 aa12.2□□□□□ -0.46
TVP23B-208ENST00000575261 ENAHQ8N8S7 591 aaPredicted RBP12.2□□□□□ -0.46
TVP23B-208ENST00000575261 RETREG2Q8NC44 543 aa12.2□□□□□ -0.46
TVP23B-208ENST00000575261 SYTL5Q8TDW5 730 aaPredicted RBP12.2□□□□□ -0.46
TVP23B-208ENST00000575261 NSUN6Q8TEA1 469 aaKnown RBP12.2□□□□□ -0.46
TVP23B-208ENST00000575261 ANKS1AQ92625 1134 aa12.2□□□□□ -0.46
TVP23B-208ENST00000575261 DSCC1Q9BVC3 393 aa12.2□□□□□ -0.46
TVP23B-208ENST00000575261 TNFRSF10AO00220 468 aa12.19□□□□□ -0.46
TVP23B-208ENST00000575261 GH1P01241 217 aa12.19□□□□□ -0.46
TVP23B-208ENST00000575261 CA3P07451 260 aa12.19□□□□□ -0.46
TVP23B-208ENST00000575261 CHMP4BP1P59074 171 aa12.19□□□□□ -0.46
TVP23B-208ENST00000575261 MRPS5P82675 430 aaKnown RBP12.19□□□□□ -0.46
TVP23B-208ENST00000575261 ARHGAP1Q07960 439 aa12.19□□□□□ -0.46
TVP23B-208ENST00000575261 STXBP2Q15833 593 aa12.19□□□□□ -0.46
TVP23B-208ENST00000575261 QRICH1Q2TAL8 776 aa12.19□□□□□ -0.46
TVP23B-208ENST00000575261 SEPT14Q6ZU15 432 aa12.19□□□□□ -0.46
TVP23B-208ENST00000575261 SESTD1Q86VW0 696 aa12.19□□□□□ -0.46
TVP23B-208ENST00000575261 FBXO11Q86XK2 927 aa12.19□□□□□ -0.46
TVP23B-208ENST00000575261 IL27Q8NEV9 243 aa12.19□□□□□ -0.46
TVP23B-208ENST00000575261 CAGE1Q8TC20 777 aa12.19□□□□□ -0.46
TVP23B-208ENST00000575261 PPP1R13LQ8WUF5 828 aa12.19□□□□□ -0.46
TVP23B-208ENST00000575261 AFG1LQ8WV93 481 aa12.19□□□□□ -0.46
TVP23B-208ENST00000575261 ASB2Q96Q27 587 aa12.19□□□□□ -0.46
TVP23B-208ENST00000575261 IWS1Q96ST2 819 aa12.19□□□□□ -0.46
TVP23B-208ENST00000575261 RMDN3Q96TC7 470 aa12.19□□□□□ -0.46
TVP23B-208ENST00000575261 UBAC1Q9BSL1 405 aa12.19□□□□□ -0.46
TVP23B-208ENST00000575261 KRT23Q9C075 422 aa12.19□□□□□ -0.46
TVP23B-208ENST00000575261 TSPYL2Q9H2G4 693 aaPredicted RBP12.19□□□□□ -0.46
TVP23B-208ENST00000575261 CNNM2Q9H8M5 875 aa12.19□□□□□ -0.46
TVP23B-208ENST00000575261 COL20A1Q9P218 1284 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms