RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 STRCQ7RTU9 1775 aa15.93■□□□□ 0.14
SMG6-215ENST00000574501 GCOM1H8Y6P7 765 aaPredicted RBP15.93■□□□□ 0.14
SMG6-215ENST00000574501 SNAP23O00161 211 aa15.93■□□□□ 0.14
SMG6-215ENST00000574501 TRAPPC3O43617 180 aa15.93■□□□□ 0.14
SMG6-215ENST00000574501 FTCDO95954 541 aa15.93■□□□□ 0.14
SMG6-215ENST00000574501 MYZAPP0CAP1 466 aa15.93■□□□□ 0.14
SMG6-215ENST00000574501 BYSLQ13895 437 aaKnown RBP15.93■□□□□ 0.14
SMG6-215ENST00000574501 HLTFQ14527 1009 aaKnown RBP eCLIP15.93■□□□□ 0.14
SMG6-215ENST00000574501 SEC23AQ15436 765 aa15.93■□□□□ 0.14
SMG6-215ENST00000574501 TLDC1Q6P9B6 456 aa15.93■□□□□ 0.14
SMG6-215ENST00000574501 RRAGAQ7L523 313 aa15.93■□□□□ 0.14
SMG6-215ENST00000574501 CCDC50Q8IVM0 306 aa15.93■□□□□ 0.14
SMG6-215ENST00000574501 KLHL7Q8IXQ5 586 aa15.93■□□□□ 0.14
SMG6-215ENST00000574501 PROCA1Q8NCQ7 364 aaPredicted RBP15.93■□□□□ 0.14
SMG6-215ENST00000574501 GIMAP8Q8ND71 665 aaPredicted RBP15.93■□□□□ 0.14
SMG6-215ENST00000574501 MMRN2Q9H8L6 949 aa15.93■□□□□ 0.14
SMG6-215ENST00000574501 A0A1B0GUA9 196 aa15.93■□□□□ 0.14
SMG6-215ENST00000574501 A0A1W2PQJ5 194 aa15.93■□□□□ 0.14
SMG6-215ENST00000574501 LRRC53A6NM62 1247 aa15.93■□□□□ 0.14
SMG6-215ENST00000574501 CSB-PGBD3P0DP91 1061 aa15.93■□□□□ 0.14
SMG6-215ENST00000574501 SLC1A4P43007 532 aa15.93■□□□□ 0.14
SMG6-215ENST00000574501 NLRP5P59047 1200 aa15.93■□□□□ 0.14
SMG6-215ENST00000574501 CDC37Q16543 378 aaPredicted RBP15.93■□□□□ 0.14
SMG6-215ENST00000574501 ENAHQ8N8S7 591 aaPredicted RBP15.93■□□□□ 0.14
SMG6-215ENST00000574501 LPIN2Q92539 896 aa15.93■□□□□ 0.14
SMG6-215ENST00000574501 NOX5Q96PH1 765 aa15.93■□□□□ 0.14
SMG6-215ENST00000574501 NACAP1Q9BZK3 213 aa15.93■□□□□ 0.14
SMG6-215ENST00000574501 PHF20L1A8MW92 1017 aa15.92■□□□□ 0.14
SMG6-215ENST00000574501 RAD51CO43502 376 aa15.92■□□□□ 0.14
SMG6-215ENST00000574501 RTN2O75298 545 aa15.92■□□□□ 0.14
SMG6-215ENST00000574501 HSD17B3P37058 310 aa15.92■□□□□ 0.14
SMG6-215ENST00000574501 MAP3K12Q12852 859 aa15.92■□□□□ 0.14
SMG6-215ENST00000574501 WHAMMQ8TF30 809 aa15.92■□□□□ 0.14
SMG6-215ENST00000574501 TBC1D22AQ8WUA7 517 aa15.92■□□□□ 0.14
SMG6-215ENST00000574501 ERGIC2Q96RQ1 377 aa15.92■□□□□ 0.14
SMG6-215ENST00000574501 ISCA1Q9BUE6 129 aa15.92■□□□□ 0.14
SMG6-215ENST00000574501 CNOT8Q9UFF9 292 aaKnown RBP15.92■□□□□ 0.14
SMG6-215ENST00000574501 SLC12A6Q9UHW9 1150 aa15.92■□□□□ 0.14
SMG6-215ENST00000574501 IQSEC3Q9UPP2 1182 aaPredicted RBP15.92■□□□□ 0.14
SMG6-215ENST00000574501 KIF1AQ12756 1690 aa15.92■□□□□ 0.14
SMG6-215ENST00000574501 RHOBTB3O94955 611 aa15.92■□□□□ 0.14
SMG6-215ENST00000574501 CSF1RP07333 972 aa15.92■□□□□ 0.14
SMG6-215ENST00000574501 KCNB1Q14721 858 aa15.92■□□□□ 0.14
SMG6-215ENST00000574501 FMNL3Q8IVF7 1028 aa15.92■□□□□ 0.14
SMG6-215ENST00000574501 CACNA2D3Q8IZS8 1091 aa15.92■□□□□ 0.14
SMG6-215ENST00000574501 ARFGAP2Q8N6H7 521 aa15.92■□□□□ 0.14
SMG6-215ENST00000574501 SPATA5Q8NB90 893 aa15.92■□□□□ 0.14
SMG6-215ENST00000574501 P2RX5Q93086 422 aa15.92■□□□□ 0.14
SMG6-215ENST00000574501 ZNF512BQ96KM6 892 aaPredicted RBP15.92■□□□□ 0.14
SMG6-215ENST00000574501 ATP6V0A4Q9HBG4 840 aa15.92■□□□□ 0.14
SMG6-215ENST00000574501 BAIAP2L1Q9UHR4 511 aa15.92■□□□□ 0.14
SMG6-215ENST00000574501 PALMO75781 387 aa15.91■□□□□ 0.14
SMG6-215ENST00000574501 FCER1AP12319 257 aa15.91■□□□□ 0.14
SMG6-215ENST00000574501 LONP1P36776 959 aaKnown RBP15.91■□□□□ 0.14
SMG6-215ENST00000574501 STK4Q13043 487 aa15.91■□□□□ 0.14
SMG6-215ENST00000574501 CCDC178Q5BJE1 867 aa15.91■□□□□ 0.14
SMG6-215ENST00000574501 DDX42Q86XP3 938 aaKnown RBP eCLIP15.91■□□□□ 0.14
SMG6-215ENST00000574501 MAGEC3Q8TD91 643 aa15.91■□□□□ 0.14
SMG6-215ENST00000574501 LRRC15Q8TF66 581 aa15.91■□□□□ 0.14
SMG6-215ENST00000574501 NOC3LQ8WTT2 800 aaKnown RBP15.91■□□□□ 0.14
SMG6-215ENST00000574501 SDR42E1Q8WUS8 393 aa15.91■□□□□ 0.14
SMG6-215ENST00000574501 RAPGEF5Q92565 580 aa15.91■□□□□ 0.14
SMG6-215ENST00000574501 HPS3Q969F9 1004 aa15.91■□□□□ 0.14
SMG6-215ENST00000574501 HVCN1Q96D96 273 aa15.91■□□□□ 0.14
SMG6-215ENST00000574501 DCDC2CA8MYV0 355 aa15.9■□□□□ 0.14
SMG6-215ENST00000574501 PDE8BO95263 885 aa15.9■□□□□ 0.14
SMG6-215ENST00000574501 LCA5LO95447 670 aa15.9■□□□□ 0.14
SMG6-215ENST00000574501 ARID4AP29374 1257 aaPredicted RBP15.9■□□□□ 0.14
SMG6-215ENST00000574501 HNRNPH3P31942 346 aaKnown RBP15.9■□□□□ 0.14
SMG6-215ENST00000574501 SLC8A1P32418 973 aa15.9■□□□□ 0.14
SMG6-215ENST00000574501 HSPA9P38646 679 aaKnown RBP15.9■□□□□ 0.14
SMG6-215ENST00000574501 CCNHP51946 323 aaPredicted RBP15.9■□□□□ 0.14
SMG6-215ENST00000574501 RCAN1P53805 252 aa15.9■□□□□ 0.14
SMG6-215ENST00000574501 XRCC4Q13426 336 aa15.9■□□□□ 0.14
SMG6-215ENST00000574501 FIGNQ5HY92 759 aa15.9■□□□□ 0.14
SMG6-215ENST00000574501 IFIT1BQ5T764 474 aaKnown RBP15.9■□□□□ 0.14
SMG6-215ENST00000574501 CATIPQ7Z7H3 387 aa15.9■□□□□ 0.14
SMG6-215ENST00000574501 VGLL2Q8N8G2 317 aa15.9■□□□□ 0.14
SMG6-215ENST00000574501 DHTKD1Q96HY7 919 aaPredicted RBP15.9■□□□□ 0.14
SMG6-215ENST00000574501 MYH2Q9UKX2 1941 aa15.9■□□□□ 0.14
SMG6-215ENST00000574501 RTL9Q8NET4 1388 aa15.9■□□□□ 0.14
SMG6-215ENST00000574501 NUP188Q5SRE5 1749 aa15.9■□□□□ 0.14
SMG6-215ENST00000574501 CCNE1P24864 410 aa15.9■□□□□ 0.14
SMG6-215ENST00000574501 CTNNA1P35221 906 aaKnown RBP15.9■□□□□ 0.14
SMG6-215ENST00000574501 UAP1Q16222 522 aaPredicted RBP15.9■□□□□ 0.14
SMG6-215ENST00000574501 MSL1Q68DK7 614 aa15.9■□□□□ 0.14
SMG6-215ENST00000574501 CHADLQ6NUI6 762 aa15.9■□□□□ 0.14
SMG6-215ENST00000574501 C4orf32Q8N8J7 132 aa15.9■□□□□ 0.14
SMG6-215ENST00000574501 C1orf131Q8NDD1 294 aaKnown RBP15.9■□□□□ 0.14
SMG6-215ENST00000574501 PLCB1Q9NQ66 1216 aa15.9■□□□□ 0.14
SMG6-215ENST00000574501 CAMTA1Q9Y6Y1 1673 aa15.9■□□□□ 0.14
SMG6-215ENST00000574501 SRRM3A6NNA2 597 aaPredicted RBP15.89■□□□□ 0.13
SMG6-215ENST00000574501 MGRN1O60291 552 aa15.89■□□□□ 0.13
SMG6-215ENST00000574501 ELF3P78545 371 aaPredicted RBP15.89■□□□□ 0.13
SMG6-215ENST00000574501 EHHADHQ08426 723 aa15.89■□□□□ 0.13
SMG6-215ENST00000574501 PDE4DQ08499 809 aa15.89■□□□□ 0.13
SMG6-215ENST00000574501 ZNF844Q08AG5 666 aa15.89■□□□□ 0.13
SMG6-215ENST00000574501 RASGRF1Q13972 1273 aa15.89■□□□□ 0.13
SMG6-215ENST00000574501 HIBCHQ6NVY1 386 aaPredicted RBP15.89■□□□□ 0.13
SMG6-215ENST00000574501 CPLX4Q7Z7G2 160 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms