RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 ZNF214Q9UL59 606 aaPredicted RBP8.78□□□□□ -1
NUP88-205ENST00000572809 OGDHLQ9ULD0 1010 aa8.78□□□□□ -1
NUP88-205ENST00000572809 GREB1LQ9C091 1923 aaPredicted RBP8.78□□□□□ -1
NUP88-205ENST00000572809 PLIN4Q96Q06 1357 aa8.77□□□□□ -1.01
NUP88-205ENST00000572809 ZNF213O14771 459 aa8.77□□□□□ -1.01
NUP88-205ENST00000572809 ATP2A1O14983 1001 aa8.77□□□□□ -1.01
NUP88-205ENST00000572809 NMT2O60551 498 aa8.77□□□□□ -1.01
NUP88-205ENST00000572809 IGHA2P01877 340 aa8.77□□□□□ -1.01
NUP88-205ENST00000572809 MCCP23508 829 aa8.77□□□□□ -1.01
NUP88-205ENST00000572809 COPB2P35606 906 aa8.77□□□□□ -1.01
NUP88-205ENST00000572809 SLC1A4P43007 532 aa8.77□□□□□ -1.01
NUP88-205ENST00000572809 HAND2P61296 217 aa8.77□□□□□ -1.01
NUP88-205ENST00000572809 AKNAD1Q5T1N1 836 aa8.77□□□□□ -1.01
NUP88-205ENST00000572809 RCSD1Q6JBY9 416 aa8.77□□□□□ -1.01
NUP88-205ENST00000572809 MFSD6Q6ZSS7 791 aa8.77□□□□□ -1.01
NUP88-205ENST00000572809 CHURC1Q8WUH1 139 aa8.77□□□□□ -1.01
NUP88-205ENST00000572809 STAG1Q8WVM7 1258 aa8.77□□□□□ -1.01
NUP88-205ENST00000572809 MMP19Q99542 508 aa8.77□□□□□ -1.01
NUP88-205ENST00000572809 TEX13BQ9BXU2 312 aa8.77□□□□□ -1.01
NUP88-205ENST00000572809 RAVER2Q9HCJ3 691 aaKnown RBP8.77□□□□□ -1.01
NUP88-205ENST00000572809 TCP11L1Q9NUJ3 509 aa8.77□□□□□ -1.01
NUP88-205ENST00000572809 ISY1Q9ULR0 285 aaKnown RBP8.77□□□□□ -1.01
NUP88-205ENST00000572809 NR2E3Q9Y5X4 410 aa8.77□□□□□ -1.01
NUP88-205ENST00000572809 ZMYM6O95789 1325 aa8.77□□□□□ -1.01
NUP88-205ENST00000572809 H0YGN5 161 aa8.76□□□□□ -1.01
NUP88-205ENST00000572809 H3BM21 787 aa8.76□□□□□ -1.01
NUP88-205ENST00000572809 CAPN5O15484 640 aaPredicted RBP8.76□□□□□ -1.01
NUP88-205ENST00000572809 MSCO60682 206 aa8.76□□□□□ -1.01
NUP88-205ENST00000572809 PLA2G6O60733 806 aa8.76□□□□□ -1.01
NUP88-205ENST00000572809 PGK2P07205 417 aa8.76□□□□□ -1.01
NUP88-205ENST00000572809 PCP11498 1178 aaKnown RBP8.76□□□□□ -1.01
NUP88-205ENST00000572809 NOVP48745 357 aa8.76□□□□□ -1.01
NUP88-205ENST00000572809 STAT2P52630 851 aa8.76□□□□□ -1.01
NUP88-205ENST00000572809 IKQ13123 557 aaPredicted RBP8.76□□□□□ -1.01
NUP88-205ENST00000572809 ZNF792Q3KQV3 632 aa8.76□□□□□ -1.01
NUP88-205ENST00000572809 PRAMEF19Q5SWL8 479 aa8.76□□□□□ -1.01
NUP88-205ENST00000572809 TTC22Q5TAA0 569 aa8.76□□□□□ -1.01
NUP88-205ENST00000572809 SNRNP48Q6IEG0 339 aaKnown RBP8.76□□□□□ -1.01
NUP88-205ENST00000572809 FAM160B2Q86V87 743 aa8.76□□□□□ -1.01
NUP88-205ENST00000572809 DIS3LQ8TF46 1054 aaKnown RBP8.76□□□□□ -1.01
NUP88-205ENST00000572809 GLMNQ92990 594 aa8.76□□□□□ -1.01
NUP88-205ENST00000572809 CHMP4CQ96CF2 233 aa8.76□□□□□ -1.01
NUP88-205ENST00000572809 DDX11Q96FC9 970 aa8.76□□□□□ -1.01
NUP88-205ENST00000572809 GMCL1Q96IK5 515 aa8.76□□□□□ -1.01
NUP88-205ENST00000572809 MAML3Q96JK9 1138 aa8.76□□□□□ -1.01
NUP88-205ENST00000572809 TTC14Q96N46 770 aa8.76□□□□□ -1.01
NUP88-205ENST00000572809 RNF41Q9H4P4 317 aaPredicted RBP8.76□□□□□ -1.01
NUP88-205ENST00000572809 SLC38A10Q9HBR0 1119 aa8.76□□□□□ -1.01
NUP88-205ENST00000572809 DDX20Q9UHI6 824 aaKnown RBP8.76□□□□□ -1.01
NUP88-205ENST00000572809 DIS3Q9Y2L1 958 aaKnown RBP8.76□□□□□ -1.01
NUP88-205ENST00000572809 RIPK3Q9Y572 518 aa8.76□□□□□ -1.01
NUP88-205ENST00000572809 POM121CA8CG34 1229 aa8.75□□□□□ -1.01
NUP88-205ENST00000572809 TOP1P11387 765 aaKnown RBP8.75□□□□□ -1.01
NUP88-205ENST00000572809 CYBAP13498 195 aa8.75□□□□□ -1.01
NUP88-205ENST00000572809 OAZ1P54368 228 aa8.75□□□□□ -1.01
NUP88-205ENST00000572809 NR6A1Q15406 480 aa8.75□□□□□ -1.01
NUP88-205ENST00000572809 KCTD1Q719H9 257 aa8.75□□□□□ -1.01
NUP88-205ENST00000572809 TRPV1Q8NER1 839 aa8.75□□□□□ -1.01
NUP88-205ENST00000572809 CHST13Q8NET6 341 aa8.75□□□□□ -1.01
NUP88-205ENST00000572809 ESR2Q92731 530 aa8.75□□□□□ -1.01
NUP88-205ENST00000572809 TMEM47Q9BQJ4 181 aa8.75□□□□□ -1.01
NUP88-205ENST00000572809 TINF2Q9BSI4 451 aa8.75□□□□□ -1.01
NUP88-205ENST00000572809 DSCC1Q9BVC3 393 aa8.75□□□□□ -1.01
NUP88-205ENST00000572809 C11orf49Q9H6J7 331 aa8.75□□□□□ -1.01
NUP88-205ENST00000572809 FBXO40Q9UH90 709 aa8.75□□□□□ -1.01
NUP88-205ENST00000572809 CTNNA3Q9UI47 895 aa8.75□□□□□ -1.01
NUP88-205ENST00000572809 MTMR7Q9Y216 660 aa8.75□□□□□ -1.01
NUP88-205ENST00000572809 MYH4Q9Y623 1939 aa8.75□□□□□ -1.01
NUP88-205ENST00000572809 PARP14Q460N5 1801 aa8.75□□□□□ -1.01
NUP88-205ENST00000572809 A0A0G2JMZ2 1700 aa8.74□□□□□ -1.01
NUP88-205ENST00000572809 ZNFX1Q9P2E3 1918 aaKnown RBP8.74□□□□□ -1.01
NUP88-205ENST00000572809 GSPT1P15170 499 aaKnown RBP8.74□□□□□ -1.01
NUP88-205ENST00000572809 SUZ12Q15022 739 aaKnown RBP8.74□□□□□ -1.01
NUP88-205ENST00000572809 IMMTQ16891 758 aaKnown RBP8.74□□□□□ -1.01
NUP88-205ENST00000572809 CCDC178Q5BJE1 867 aa8.74□□□□□ -1.01
NUP88-205ENST00000572809 LYPD8Q6UX82 237 aa8.74□□□□□ -1.01
NUP88-205ENST00000572809 TBC1D10CQ8IV04 446 aa8.74□□□□□ -1.01
NUP88-205ENST00000572809 ANKRD35Q8N283 1001 aa8.74□□□□□ -1.01
NUP88-205ENST00000572809 ARRDC4Q8NCT1 418 aa8.74□□□□□ -1.01
NUP88-205ENST00000572809 DCAF4Q8WV16 495 aa8.74□□□□□ -1.01
NUP88-205ENST00000572809 RUFY2Q8WXA3 655 aa8.74□□□□□ -1.01
NUP88-205ENST00000572809 COL11A1P12107 1806 aaPredicted RBP8.74□□□□□ -1.01
NUP88-205ENST00000572809 BRCA2P51587 3418 aa8.73□□□□□ -1.01
NUP88-205ENST00000572809 DNAJC25-GNG10A0A024R161 153 aa8.73□□□□□ -1.01
NUP88-205ENST00000572809 SEPT4O43236 478 aa8.73□□□□□ -1.01
NUP88-205ENST00000572809 SIAH2O43255 324 aa8.73□□□□□ -1.01
NUP88-205ENST00000572809 COL6A1P12109 1028 aa8.73□□□□□ -1.01
NUP88-205ENST00000572809 CHMLP26374 656 aa8.73□□□□□ -1.01
NUP88-205ENST00000572809 SOX11P35716 441 aa8.73□□□□□ -1.01
NUP88-205ENST00000572809 NT5C2P49902 561 aa8.73□□□□□ -1.01
NUP88-205ENST00000572809 SNAP25P60880 206 aa8.73□□□□□ -1.01
NUP88-205ENST00000572809 CCDC96Q2M329 555 aa8.73□□□□□ -1.01
NUP88-205ENST00000572809 TKFCQ3LXA3 575 aa8.73□□□□□ -1.01
NUP88-205ENST00000572809 HABP4Q5JVS0 413 aaKnown RBP8.73□□□□□ -1.01
NUP88-205ENST00000572809 ANO1Q5XXA6 986 aa8.73□□□□□ -1.01
NUP88-205ENST00000572809 TTBK2Q6IQ55 1244 aa8.73□□□□□ -1.01
NUP88-205ENST00000572809 DGKHQ86XP1 1220 aa8.73□□□□□ -1.01
NUP88-205ENST00000572809 MSL3Q8N5Y2 521 aaKnown RBP8.73□□□□□ -1.01
NUP88-205ENST00000572809 AGBL1Q96MI9 1066 aa8.73□□□□□ -1.01
NUP88-205ENST00000572809 TRERF1Q96PN7 1200 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms