RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 RBAK-RBAKDNI3L0D1 243 aa21.14■□□□□ 0.97
CHD3-214ENST00000572579 TLR3O15455 904 aaKnown RBP21.14■□□□□ 0.97
CHD3-214ENST00000572579 PPIGQ13427 754 aaKnown RBP eCLIP21.14■□□□□ 0.97
CHD3-214ENST00000572579 CHST3Q7LGC8 479 aa21.14■□□□□ 0.97
CHD3-214ENST00000572579 FBXO11Q86XK2 927 aa21.14■□□□□ 0.97
CHD3-214ENST00000572579 HIPK3Q9H422 1215 aa21.14■□□□□ 0.97
CHD3-214ENST00000572579 CXXC1Q9P0U4 656 aaPredicted RBP21.14■□□□□ 0.97
CHD3-214ENST00000572579 VCANP13611 3396 aa21.14■□□□□ 0.97
CHD3-214ENST00000572579 A6NJR5 290 aa21.13■□□□□ 0.97
CHD3-214ENST00000572579 E7EWF7 191 aa21.13■□□□□ 0.97
CHD3-214ENST00000572579 CYTH3O43739 400 aa21.13■□□□□ 0.97
CHD3-214ENST00000572579 MYL3P08590 195 aa21.13■□□□□ 0.97
CHD3-214ENST00000572579 TXNP10599 105 aaKnown RBP21.13■□□□□ 0.97
CHD3-214ENST00000572579 PBX2P40425 430 aa21.13■□□□□ 0.97
CHD3-214ENST00000572579 CCL23P55773 120 aa21.13■□□□□ 0.97
CHD3-214ENST00000572579 ANTXR2P58335 489 aa21.13■□□□□ 0.97
CHD3-214ENST00000572579 SKAP1Q86WV1 359 aa21.13■□□□□ 0.97
CHD3-214ENST00000572579 TMEM199Q8N511 208 aa21.13■□□□□ 0.97
CHD3-214ENST00000572579 SCFD2Q8WU76 684 aa21.13■□□□□ 0.97
CHD3-214ENST00000572579 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.12■□□□□ 0.97
CHD3-214ENST00000572579 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.12■□□□□ 0.97
CHD3-214ENST00000572579 CYP2C9P11712 490 aa21.12■□□□□ 0.97
CHD3-214ENST00000572579 PPP2R5BQ15173 497 aa21.12■□□□□ 0.97
CHD3-214ENST00000572579 LY6KQ17RY6 165 aa21.12■□□□□ 0.97
CHD3-214ENST00000572579 NBPF20Q3BBV1 942 aa21.12■□□□□ 0.97
CHD3-214ENST00000572579 MYLIPQ8WY64 445 aa21.12■□□□□ 0.97
CHD3-214ENST00000572579 MAP4K1Q92918 833 aa21.12■□□□□ 0.97
CHD3-214ENST00000572579 MAF1Q9H063 256 aa21.12■□□□□ 0.97
CHD3-214ENST00000572579 IL23AQ9NPF7 189 aa21.12■□□□□ 0.97
CHD3-214ENST00000572579 GPHNQ9NQX3 736 aaPredicted RBP21.12■□□□□ 0.97
CHD3-214ENST00000572579 MRPL11Q9Y3B7 192 aaKnown RBP21.12■□□□□ 0.97
CHD3-214ENST00000572579 U3KPZ7 1027 aaPredicted RBP21.12■□□□□ 0.97
CHD3-214ENST00000572579 CHD9Q3L8U1 2897 aa21.12■□□□□ 0.97
CHD3-214ENST00000572579 HSD17B4P51659 736 aa21.11■□□□□ 0.97
CHD3-214ENST00000572579 GHRHRQ02643 423 aa21.11■□□□□ 0.97
CHD3-214ENST00000572579 TROAPQ12815 778 aa21.11■□□□□ 0.97
CHD3-214ENST00000572579 GRM4Q14833 912 aa21.11■□□□□ 0.97
CHD3-214ENST00000572579 GRIN2CQ14957 1233 aa21.11■□□□□ 0.97
CHD3-214ENST00000572579 SEPT14Q6ZU15 432 aa21.11■□□□□ 0.97
CHD3-214ENST00000572579 IGDCC4Q8TDY8 1250 aa21.11■□□□□ 0.97
CHD3-214ENST00000572579 NSUN6Q8TEA1 469 aaKnown RBP21.11■□□□□ 0.97
CHD3-214ENST00000572579 RMDN3Q96TC7 470 aa21.11■□□□□ 0.97
CHD3-214ENST00000572579 MTG1Q9BT17 334 aaPredicted RBP21.11■□□□□ 0.97
CHD3-214ENST00000572579 POLR3EQ9NVU0 708 aa21.11■□□□□ 0.97
CHD3-214ENST00000572579 IFIT3O14879 490 aaKnown RBP21.1■□□□□ 0.97
CHD3-214ENST00000572579 NKRFO15226 690 aaKnown RBP eCLIP21.1■□□□□ 0.97
CHD3-214ENST00000572579 DHX16O60231 1041 aaKnown RBP21.1■□□□□ 0.97
CHD3-214ENST00000572579 RGS20O76081 388 aa21.1■□□□□ 0.97
CHD3-214ENST00000572579 DNAJB2P25686 324 aa21.1■□□□□ 0.97
CHD3-214ENST00000572579 CPT1AP50416 773 aa21.1■□□□□ 0.97
CHD3-214ENST00000572579 ARHGAP1Q07960 439 aa21.1■□□□□ 0.97
CHD3-214ENST00000572579 AFG1LQ8WV93 481 aa21.1■□□□□ 0.97
CHD3-214ENST00000572579 RUFY2Q8WXA3 655 aa21.1■□□□□ 0.97
CHD3-214ENST00000572579 HERVK_113Q902F9 699 aa21.1■□□□□ 0.97
CHD3-214ENST00000572579 SCLYQ96I15 445 aa21.1■□□□□ 0.97
CHD3-214ENST00000572579 AMNQ9BXJ7 453 aa21.1■□□□□ 0.97
CHD3-214ENST00000572579 SEZ6LQ9BYH1 1024 aa21.1■□□□□ 0.97
CHD3-214ENST00000572579 PBX4Q9BYU1 374 aa21.1■□□□□ 0.97
CHD3-214ENST00000572579 RIOX1Q9H6W3 641 aa21.1■□□□□ 0.97
CHD3-214ENST00000572579 DLL1O00548 723 aa21.09■□□□□ 0.97
CHD3-214ENST00000572579 ZBTB5O15062 677 aa21.09■□□□□ 0.97
CHD3-214ENST00000572579 CFBP00751 764 aa21.09■□□□□ 0.97
CHD3-214ENST00000572579 EIF2AK2P19525 551 aaKnown RBP21.09■□□□□ 0.97
CHD3-214ENST00000572579 TTLL4Q14679 1199 aa21.09■□□□□ 0.97
CHD3-214ENST00000572579 MCF2L2Q86YR7 1114 aa21.09■□□□□ 0.97
CHD3-214ENST00000572579 MB21D2Q8IYB1 491 aaPredicted RBP21.09■□□□□ 0.97
CHD3-214ENST00000572579 KAT2BQ92831 832 aa21.09■□□□□ 0.97
CHD3-214ENST00000572579 CTAGE1Q96RT6 745 aa21.09■□□□□ 0.97
CHD3-214ENST00000572579 PIGSQ96S52 555 aa21.09■□□□□ 0.97
CHD3-214ENST00000572579 IWS1Q96ST2 819 aa21.09■□□□□ 0.97
CHD3-214ENST00000572579 PXMP2Q9NR77 195 aa21.09■□□□□ 0.97
CHD3-214ENST00000572579 DDX41Q9UJV9 622 aaKnown RBP21.09■□□□□ 0.97
CHD3-214ENST00000572579 NR3C2P08235 984 aa21.08■□□□□ 0.97
CHD3-214ENST00000572579 HOXA13P31271 388 aaPredicted RBP21.08■□□□□ 0.97
CHD3-214ENST00000572579 LSG1Q9H089 658 aaKnown RBP21.08■□□□□ 0.97
CHD3-214ENST00000572579 PCDHA1Q9Y5I3 950 aa21.08■□□□□ 0.97
CHD3-214ENST00000572579 RBM8AQ9Y5S9 174 aaKnown RBP21.08■□□□□ 0.97
CHD3-214ENST00000572579 FGBP02675 491 aa21.07■□□□□ 0.96
CHD3-214ENST00000572579 TRDNQ13061 729 aa21.07■□□□□ 0.96
CHD3-214ENST00000572579 STXBP2Q15833 593 aa21.07■□□□□ 0.96
CHD3-214ENST00000572579 ARHGEF16Q5VV41 709 aa21.07■□□□□ 0.96
CHD3-214ENST00000572579 PSRC1Q6PGN9 363 aaPredicted RBP21.07■□□□□ 0.96
CHD3-214ENST00000572579 OTOP2Q7RTS6 562 aa21.07■□□□□ 0.96
CHD3-214ENST00000572579 NCOA7Q8NI08 942 aa21.07■□□□□ 0.96
CHD3-214ENST00000572579 IL31RAQ8NI17 732 aa21.07■□□□□ 0.96
CHD3-214ENST00000572579 TIFAQ96CG3 184 aa21.07■□□□□ 0.96
CHD3-214ENST00000572579 ZFP91Q96JP5 570 aaPredicted RBP21.07■□□□□ 0.96
CHD3-214ENST00000572579 ZNF576Q9H609 170 aa21.07■□□□□ 0.96
CHD3-214ENST00000572579 CHD7Q9P2D1 2997 aa21.06■□□□□ 0.96
CHD3-214ENST00000572579 TMEM265A0A087WTH1 108 aa21.06■□□□□ 0.96
CHD3-214ENST00000572579 B4DLN1 442 aa21.06■□□□□ 0.96
CHD3-214ENST00000572579 MMP3P08254 477 aa21.06■□□□□ 0.96
CHD3-214ENST00000572579 MRPL12P52815 198 aaKnown RBP21.06■□□□□ 0.96
CHD3-214ENST00000572579 NFRKBQ6P4R8 1299 aa21.06■□□□□ 0.96
CHD3-214ENST00000572579 HOMER1Q86YM7 354 aa21.06■□□□□ 0.96
CHD3-214ENST00000572579 MPHOSPH6Q99547 160 aaKnown RBP21.06■□□□□ 0.96
CHD3-214ENST00000572579 KPNA6O60684 536 aa21.05■□□□□ 0.96
CHD3-214ENST00000572579 EIF3JO75822 258 aaKnown RBP21.05■□□□□ 0.96
CHD3-214ENST00000572579 SP2Q02086 613 aa21.05■□□□□ 0.96
CHD3-214ENST00000572579 GPNMBQ14956 572 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms