RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 PNMA1Q8ND90 353 aa18.19■□□□□ 0.5
TSR1-202ENST00000571806 IWS1Q96ST2 819 aa18.19■□□□□ 0.5
TSR1-202ENST00000571806 NKX2-4Q9H2Z4 354 aa18.19■□□□□ 0.5
TSR1-202ENST00000571806 TRMT13Q9NUP7 481 aaKnown RBP18.19■□□□□ 0.5
TSR1-202ENST00000571806 ZBBXA8MT70 800 aa18.18■□□□□ 0.5
TSR1-202ENST00000571806 ATP2A2P16615 1042 aaKnown RBP18.18■□□□□ 0.5
TSR1-202ENST00000571806 BFSP2Q13515 415 aa18.18■□□□□ 0.5
TSR1-202ENST00000571806 USH1GQ495M9 461 aa18.18■□□□□ 0.5
TSR1-202ENST00000571806 FAM47CQ5HY64 1035 aa18.18■□□□□ 0.5
TSR1-202ENST00000571806 USP38Q8NB14 1042 aa18.18■□□□□ 0.5
TSR1-202ENST00000571806 NSUN6Q8TEA1 469 aaKnown RBP18.18■□□□□ 0.5
TSR1-202ENST00000571806 SCLYQ96I15 445 aa18.18■□□□□ 0.5
TSR1-202ENST00000571806 TSPYL2Q9H2G4 693 aaPredicted RBP18.18■□□□□ 0.5
TSR1-202ENST00000571806 DIAPH3Q9NSV4 1193 aa18.18■□□□□ 0.5
TSR1-202ENST00000571806 CTNNA3Q9UI47 895 aa18.18■□□□□ 0.5
TSR1-202ENST00000571806 KDM4AO75164 1064 aa18.17■□□□□ 0.5
TSR1-202ENST00000571806 CYP2C9P11712 490 aa18.17■□□□□ 0.5
TSR1-202ENST00000571806 CDC37Q16543 378 aaPredicted RBP18.17■□□□□ 0.5
TSR1-202ENST00000571806 IMMTQ16891 758 aaKnown RBP18.17■□□□□ 0.5
TSR1-202ENST00000571806 PPP2R2DQ66LE6 453 aa18.17■□□□□ 0.5
TSR1-202ENST00000571806 PLEKHM2Q8IWE5 1019 aa18.17■□□□□ 0.5
TSR1-202ENST00000571806 CCDC155Q8N6L0 562 aa18.17■□□□□ 0.5
TSR1-202ENST00000571806 PHOSPHO2Q8TCD6 241 aa18.17■□□□□ 0.5
TSR1-202ENST00000571806 ZSCAN10Q96SZ4 725 aaPredicted RBP18.17■□□□□ 0.5
TSR1-202ENST00000571806 ZKSCAN3Q9BRR0 538 aa18.17■□□□□ 0.5
TSR1-202ENST00000571806 DSCC1Q9BVC3 393 aa18.17■□□□□ 0.5
TSR1-202ENST00000571806 KRT23Q9C075 422 aa18.17■□□□□ 0.5
TSR1-202ENST00000571806 CNNM2Q9H8M5 875 aa18.17■□□□□ 0.5
TSR1-202ENST00000571806 PRDM6Q9NQX0 595 aa18.17■□□□□ 0.5
TSR1-202ENST00000571806 THEGQ9P2T0 379 aa18.17■□□□□ 0.5
TSR1-202ENST00000571806 YBX2Q9Y2T7 364 aaKnown RBP18.17■□□□□ 0.5
TSR1-202ENST00000571806 MRPL11Q9Y3B7 192 aaKnown RBP18.17■□□□□ 0.5
TSR1-202ENST00000571806 NEDD4P46934 1319 aa18.17■□□□□ 0.5
TSR1-202ENST00000571806 SPTBN5Q9NRC6 3674 aaKnown RBP18.16■□□□□ 0.5
TSR1-202ENST00000571806 GOLGA8HP0CJ92 632 aa18.16■□□□□ 0.5
TSR1-202ENST00000571806 IGFBP4P22692 258 aa18.16■□□□□ 0.5
TSR1-202ENST00000571806 NUCB1Q02818 461 aa18.16■□□□□ 0.5
TSR1-202ENST00000571806 STXBP2Q15833 593 aa18.16■□□□□ 0.5
TSR1-202ENST00000571806 TMEM67Q5HYA8 995 aa18.16■□□□□ 0.5
TSR1-202ENST00000571806 B4GALNT3Q6L9W6 998 aa18.16■□□□□ 0.5
TSR1-202ENST00000571806 CWC27Q6UX04 472 aaKnown RBP18.16■□□□□ 0.5
TSR1-202ENST00000571806 ADGRF4Q8IZF3 695 aa18.16■□□□□ 0.5
TSR1-202ENST00000571806 SLC9A7Q96T83 725 aa18.16■□□□□ 0.5
TSR1-202ENST00000571806 UBA5Q9GZZ9 404 aa18.16■□□□□ 0.5
TSR1-202ENST00000571806 NOD1Q9Y239 953 aa18.16■□□□□ 0.5
TSR1-202ENST00000571806 SCN10AQ9Y5Y9 1956 aa18.16■□□□□ 0.5
TSR1-202ENST00000571806 LAMA4Q16363 1823 aa18.16■□□□□ 0.5
TSR1-202ENST00000571806 PARNO95453 639 aaKnown RBP18.15■□□□□ 0.5
TSR1-202ENST00000571806 GH1P01241 217 aa18.15■□□□□ 0.5
TSR1-202ENST00000571806 PARP1P09874 1014 aaKnown RBP18.15■□□□□ 0.5
TSR1-202ENST00000571806 IQCF3P0C7M6 154 aa18.15■□□□□ 0.5
TSR1-202ENST00000571806 CASTP20810 708 aaKnown RBP18.15■□□□□ 0.5
TSR1-202ENST00000571806 MRPS5P82675 430 aaKnown RBP18.15■□□□□ 0.5
TSR1-202ENST00000571806 ADGRE1Q14246 886 aa18.15■□□□□ 0.5
TSR1-202ENST00000571806 CCDC62Q6P9F0 684 aa18.15■□□□□ 0.5
TSR1-202ENST00000571806 SESTD1Q86VW0 696 aa18.15■□□□□ 0.5
TSR1-202ENST00000571806 CAGE1Q8TC20 777 aa18.15■□□□□ 0.5
TSR1-202ENST00000571806 PPM1EQ8WY54 764 aa18.15■□□□□ 0.5
TSR1-202ENST00000571806 VWCEQ96DN2 955 aa18.15■□□□□ 0.5
TSR1-202ENST00000571806 ASB2Q96Q27 587 aa18.15■□□□□ 0.5
TSR1-202ENST00000571806 MAP3K20Q9NYL2 800 aaKnown RBP18.15■□□□□ 0.5
TSR1-202ENST00000571806 ZSWIM5Q9P217 1185 aa18.15■□□□□ 0.5
TSR1-202ENST00000571806 GBF1Q92538 1859 aa18.15■□□□□ 0.5
TSR1-202ENST00000571806 KIF28PB7ZC32 967 aa18.14■□□□□ 0.49
TSR1-202ENST00000571806 TNFRSF10AO00220 468 aa18.14■□□□□ 0.49
TSR1-202ENST00000571806 BAIAP3O94812 1187 aa18.14■□□□□ 0.49
TSR1-202ENST00000571806 RABGGTBP53611 331 aa18.14■□□□□ 0.49
TSR1-202ENST00000571806 DEFB128Q7Z7B8 93 aa18.14■□□□□ 0.49
TSR1-202ENST00000571806 FBXO11Q86XK2 927 aa18.14■□□□□ 0.49
TSR1-202ENST00000571806 SAMD3Q8N6K7 520 aa18.14■□□□□ 0.49
TSR1-202ENST00000571806 ENAHQ8N8S7 591 aaPredicted RBP18.14■□□□□ 0.49
TSR1-202ENST00000571806 SYTL5Q8TDW5 730 aaPredicted RBP18.14■□□□□ 0.49
TSR1-202ENST00000571806 COPS5Q92905 334 aa18.14■□□□□ 0.49
TSR1-202ENST00000571806 RMDN3Q96TC7 470 aa18.14■□□□□ 0.49
TSR1-202ENST00000571806 UBAC1Q9BSL1 405 aa18.14■□□□□ 0.49
TSR1-202ENST00000571806 B4E1Z4 1266 aa18.13■□□□□ 0.49
TSR1-202ENST00000571806 DHX16O60231 1041 aaKnown RBP18.13■□□□□ 0.49
TSR1-202ENST00000571806 EIF3JO75822 258 aaKnown RBP18.13■□□□□ 0.49
TSR1-202ENST00000571806 TRAF1Q13077 416 aa18.13■□□□□ 0.49
TSR1-202ENST00000571806 PTGISQ16647 500 aa18.13■□□□□ 0.49
TSR1-202ENST00000571806 DGKDQ16760 1214 aa18.13■□□□□ 0.49
TSR1-202ENST00000571806 ARHGEF16Q5VV41 709 aa18.13■□□□□ 0.49
TSR1-202ENST00000571806 SEPT14Q6ZU15 432 aa18.13■□□□□ 0.49
TSR1-202ENST00000571806 IL27Q8NEV9 243 aa18.13■□□□□ 0.49
TSR1-202ENST00000571806 AFAP1L1Q8TED9 768 aa18.13■□□□□ 0.49
TSR1-202ENST00000571806 EMID1Q96A84 441 aaPredicted RBP18.13■□□□□ 0.49
TSR1-202ENST00000571806 TAAR1Q96RJ0 339 aa18.13■□□□□ 0.49
TSR1-202ENST00000571806 KATNAL1Q9BW62 490 aa18.13■□□□□ 0.49
TSR1-202ENST00000571806 FTOQ9C0B1 505 aaKnown RBP eCLIP18.13■□□□□ 0.49
TSR1-202ENST00000571806 CHD9Q3L8U1 2897 aa18.12■□□□□ 0.49
TSR1-202ENST00000571806 ARIH2O95376 493 aa18.12■□□□□ 0.49
TSR1-202ENST00000571806 MMP3P08254 477 aa18.12■□□□□ 0.49
TSR1-202ENST00000571806 POU3F3P20264 500 aaPredicted RBP18.12■□□□□ 0.49
TSR1-202ENST00000571806 QRICH1Q2TAL8 776 aa18.12■□□□□ 0.49
TSR1-202ENST00000571806 AFG1LQ8WV93 481 aa18.12■□□□□ 0.49
TSR1-202ENST00000571806 AMNQ9BXJ7 453 aa18.12■□□□□ 0.49
TSR1-202ENST00000571806 CPVLQ9H3G5 476 aa18.12■□□□□ 0.49
TSR1-202ENST00000571806 GTPBP6O43824 516 aaPredicted RBP18.11■□□□□ 0.49
TSR1-202ENST00000571806 ARHGAP1Q07960 439 aa18.11■□□□□ 0.49
TSR1-202ENST00000571806 LAMC2Q13753 1193 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms