RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 BACH2Q9BYV9 841 aa10.03□□□□□ -0.8
TRAPPC1-203ENST00000571739 PSTPIP2Q9H939 334 aa10.03□□□□□ -0.8
TRAPPC1-203ENST00000571739 PXMP2Q9NR77 195 aa10.03□□□□□ -0.8
TRAPPC1-203ENST00000571739 GNEQ9Y223 722 aaKnown RBP10.03□□□□□ -0.8
TRAPPC1-203ENST00000571739 RBBP6Q7Z6E9 1792 aaKnown RBP10.03□□□□□ -0.8
TRAPPC1-203ENST00000571739 RBM47A0AV96 593 aaKnown RBP10.02□□□□□ -0.81
TRAPPC1-203ENST00000571739 STXBP3O00186 592 aa10.02□□□□□ -0.81
TRAPPC1-203ENST00000571739 PIK3CDO00329 1044 aa10.02□□□□□ -0.81
TRAPPC1-203ENST00000571739 CTAGE5O15320 804 aa10.02□□□□□ -0.81
TRAPPC1-203ENST00000571739 PFKFB2O60825 505 aa10.02□□□□□ -0.81
TRAPPC1-203ENST00000571739 ADAMTS4O75173 837 aa10.02□□□□□ -0.81
TRAPPC1-203ENST00000571739 RGS20O76081 388 aa10.02□□□□□ -0.81
TRAPPC1-203ENST00000571739 CTDNEP1O95476 244 aa10.02□□□□□ -0.81
TRAPPC1-203ENST00000571739 PGK1P00558 417 aa10.02□□□□□ -0.81
TRAPPC1-203ENST00000571739 NR3C2P08235 984 aa10.02□□□□□ -0.81
TRAPPC1-203ENST00000571739 AKR1A1P14550 325 aa10.02□□□□□ -0.81
TRAPPC1-203ENST00000571739 SMPD1P17405 629 aa10.02□□□□□ -0.81
TRAPPC1-203ENST00000571739 EIF2AK2P19525 551 aaKnown RBP10.02□□□□□ -0.81
TRAPPC1-203ENST00000571739 MLLT1Q03111 559 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC1-203ENST00000571739 PGM5Q15124 567 aa10.02□□□□□ -0.81
TRAPPC1-203ENST00000571739 ANKRD1Q15327 319 aa10.02□□□□□ -0.81
TRAPPC1-203ENST00000571739 GJC2Q5T442 439 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC1-203ENST00000571739 ARHGEF16Q5VV41 709 aa10.02□□□□□ -0.81
TRAPPC1-203ENST00000571739 IQSEC1Q6DN90 963 aa10.02□□□□□ -0.81
TRAPPC1-203ENST00000571739 HEATR3Q7Z4Q2 680 aa10.02□□□□□ -0.81
TRAPPC1-203ENST00000571739 VSIG10LQ86VR7 867 aa10.02□□□□□ -0.81
TRAPPC1-203ENST00000571739 NECAB1Q8N987 351 aa10.02□□□□□ -0.81
TRAPPC1-203ENST00000571739 ANKLE1Q8NAG6 615 aa10.02□□□□□ -0.81
TRAPPC1-203ENST00000571739 IL31RAQ8NI17 732 aa10.02□□□□□ -0.81
TRAPPC1-203ENST00000571739 IWS1Q96ST2 819 aa10.02□□□□□ -0.81
TRAPPC1-203ENST00000571739 PDCD2LQ9BRP1 358 aa10.02□□□□□ -0.81
TRAPPC1-203ENST00000571739 RNF26Q9BY78 433 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC1-203ENST00000571739 BARHL2Q9NY43 387 aa10.02□□□□□ -0.81
TRAPPC1-203ENST00000571739 BRCA2P51587 3418 aa10.01□□□□□ -0.81
TRAPPC1-203ENST00000571739 MYADML2A6NDP7 307 aa10.01□□□□□ -0.81
TRAPPC1-203ENST00000571739 SMCO2A6NFE2 343 aa10.01□□□□□ -0.81
TRAPPC1-203ENST00000571739 DUSP11O75319 330 aaKnown RBP10.01□□□□□ -0.81
TRAPPC1-203ENST00000571739 FARP2O94887 1054 aaPredicted RBP10.01□□□□□ -0.81
TRAPPC1-203ENST00000571739 RARBP10826 455 aa10.01□□□□□ -0.81
TRAPPC1-203ENST00000571739 COL6A1P12109 1028 aa10.01□□□□□ -0.81
TRAPPC1-203ENST00000571739 SCG2P13521 617 aa10.01□□□□□ -0.81
TRAPPC1-203ENST00000571739 NKX3-2P78367 333 aa10.01□□□□□ -0.81
TRAPPC1-203ENST00000571739 MRPS9P82933 396 aaKnown RBP10.01□□□□□ -0.81
TRAPPC1-203ENST00000571739 TNFAIP2Q03169 654 aa10.01□□□□□ -0.81
TRAPPC1-203ENST00000571739 PDE4DQ08499 809 aa10.01□□□□□ -0.81
TRAPPC1-203ENST00000571739 ST3GAL1Q11201 340 aa10.01□□□□□ -0.81
TRAPPC1-203ENST00000571739 LRRC41Q15345 812 aa10.01□□□□□ -0.81
TRAPPC1-203ENST00000571739 CCSAPQ6IQ19 270 aaPredicted RBP10.01□□□□□ -0.81
TRAPPC1-203ENST00000571739 NOL8Q76FK4 1167 aaKnown RBP10.01□□□□□ -0.81
TRAPPC1-203ENST00000571739 KLHDC9Q8NEP7 349 aa10.01□□□□□ -0.81
TRAPPC1-203ENST00000571739 SLC26A6Q9BXS9 759 aa10.01□□□□□ -0.81
TRAPPC1-203ENST00000571739 SLKQ9H2G2 1235 aaPredicted RBP10.01□□□□□ -0.81
TRAPPC1-203ENST00000571739 VTA1Q9NP79 307 aa10.01□□□□□ -0.81
TRAPPC1-203ENST00000571739 RIC8AQ9NPQ8 531 aa10.01□□□□□ -0.81
TRAPPC1-203ENST00000571739 XPNPEP3Q9NQH7 507 aa10.01□□□□□ -0.81
TRAPPC1-203ENST00000571739 B4DLN1 442 aa10□□□□□ -0.81
TRAPPC1-203ENST00000571739 hCG_1984214I3L0E3 225 aa10□□□□□ -0.81
TRAPPC1-203ENST00000571739 DYNC1LI2O43237 492 aaPredicted RBP10□□□□□ -0.81
TRAPPC1-203ENST00000571739 EIF3JO75822 258 aaKnown RBP10□□□□□ -0.81
TRAPPC1-203ENST00000571739 ARIH2O95376 493 aa10□□□□□ -0.81
TRAPPC1-203ENST00000571739 MYCLP12524 364 aaPredicted RBP10□□□□□ -0.81
TRAPPC1-203ENST00000571739 FDPSP14324 419 aaKnown RBP10□□□□□ -0.81
TRAPPC1-203ENST00000571739 CLK2P49760 499 aaKnown RBP10□□□□□ -0.81
TRAPPC1-203ENST00000571739 MRPL12P52815 198 aaKnown RBP10□□□□□ -0.81
TRAPPC1-203ENST00000571739 NAPAP54920 295 aa10□□□□□ -0.81
TRAPPC1-203ENST00000571739 GJA9P57773 515 aa10□□□□□ -0.81
TRAPPC1-203ENST00000571739 SSRP1Q08945 709 aaKnown RBP10□□□□□ -0.81
TRAPPC1-203ENST00000571739 STXBP2Q15833 593 aa10□□□□□ -0.81
TRAPPC1-203ENST00000571739 UBE2SQ16763 222 aa10□□□□□ -0.81
TRAPPC1-203ENST00000571739 DUSP28Q4G0W2 176 aa10□□□□□ -0.81
TRAPPC1-203ENST00000571739 CCDC62Q6P9F0 684 aa10□□□□□ -0.81
TRAPPC1-203ENST00000571739 SEPT14Q6ZU15 432 aa10□□□□□ -0.81
TRAPPC1-203ENST00000571739 NECAB2Q7Z6G3 386 aa10□□□□□ -0.81
TRAPPC1-203ENST00000571739 ZNF713Q8N859 430 aaPredicted RBP10□□□□□ -0.81
TRAPPC1-203ENST00000571739 ARRDC4Q8NCT1 418 aa10□□□□□ -0.81
TRAPPC1-203ENST00000571739 SMARCC2Q8TAQ2 1214 aa10□□□□□ -0.81
TRAPPC1-203ENST00000571739 COPS5Q92905 334 aa10□□□□□ -0.81
TRAPPC1-203ENST00000571739 TBC1D32Q96NH3 1257 aa10□□□□□ -0.81
TRAPPC1-203ENST00000571739 AIFM3Q96NN9 605 aa10□□□□□ -0.81
TRAPPC1-203ENST00000571739 WDR11Q9BZH6 1224 aa10□□□□□ -0.81
TRAPPC1-203ENST00000571739 ZMYND12Q9H0C1 365 aa10□□□□□ -0.81
TRAPPC1-203ENST00000571739 PCDHA6Q9UN73 950 aa10□□□□□ -0.81
TRAPPC1-203ENST00000571739 PCDHA8Q9Y5H6 950 aa10□□□□□ -0.81
TRAPPC1-203ENST00000571739 FRMPD4Q14CM0 1322 aa10□□□□□ -0.81
TRAPPC1-203ENST00000571739 DNM1LO00429 736 aa9.99□□□□□ -0.81
TRAPPC1-203ENST00000571739 CPLX1O14810 134 aa9.99□□□□□ -0.81
TRAPPC1-203ENST00000571739 CD2BP2O95400 341 aaKnown RBP9.99□□□□□ -0.81
TRAPPC1-203ENST00000571739 MYCNP04198 464 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC1-203ENST00000571739 BEX3Q00994 111 aa9.99□□□□□ -0.81
TRAPPC1-203ENST00000571739 SP2Q02086 613 aa9.99□□□□□ -0.81
TRAPPC1-203ENST00000571739 KCNA10Q16322 511 aa9.99□□□□□ -0.81
TRAPPC1-203ENST00000571739 CUL5Q93034 780 aa9.99□□□□□ -0.81
TRAPPC1-203ENST00000571739 MPHOSPH6Q99547 160 aaKnown RBP9.99□□□□□ -0.81
TRAPPC1-203ENST00000571739 SENP6Q9GZR1 1112 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC1-203ENST00000571739 UPF3AQ9H1J1 476 aaKnown RBP9.99□□□□□ -0.81
TRAPPC1-203ENST00000571739 C11orf49Q9H6J7 331 aa9.99□□□□□ -0.81
TRAPPC1-203ENST00000571739 BCAS3Q9H6U6 928 aa9.99□□□□□ -0.81
TRAPPC1-203ENST00000571739 TMEM260Q9NX78 707 aa9.99□□□□□ -0.81
TRAPPC1-203ENST00000571739 RTEL1Q9NZ71 1219 aa9.99□□□□□ -0.81
TRAPPC1-203ENST00000571739 VPS54Q9P1Q0 977 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms